Basic Information

Gene Symbol
NCOR1
Assembly
GCA_035047625.1
Location
JAWNPI010000109.1:19653444-19658772[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-07 0.00019 21.4 0.0 4 43 763 802 761 804 0.97

Sequence Information

Coding Sequence
atggagcagcagcagtatgTCAAGAGCCTCGGGCACTTGCAAtcgcagcatcagcagcagcagcagcaacagcagcagcagcagcaacaaatgcatcaccatcaccaccaacagcaacaacatcagcagcagcaacagcagcaacagcagcagcagcaacagcagcagcaacagcaacagcagcaacagcagcaacagcagcagcagcagcagcaatcgtcGCGGTCAGCAGCTAGTCCGCTGTCGCCGCCGCGTCCTGGACCGGGCAGCGCGgcggccgcagcagcggcgaaTAGCTATGCCAAGTTCGCGGATGCGCCGCAACATTTCATACAGTCACCGGCGTACAGCATTGGGATCGCGCCGGTGGCCAACTATCATCGGGAGAGTCCATTCATGCGGATACCTCAGCTGCAGGCGTCGGTGCCGGAGTTTCAGCGTGCGGCGCGTGCAGCGACGgtggccgccgccgccgctgtcgCCGTTGGCGGTGGCAAGGGCGGaccgggcagcagcagcggtagcAACATCGGCGTCGTCTCCTCAGCCGCTGGCccaggcagtggcagcagcggcggcgttGTCCAAGTGGCCGGCAGCATGGCTCCGCCAGGCGCCCAGCCGGGCGGCGTCCTTGTCATGGAGGCCATGTCGCTTTACCAGTCGTTGCATTACAACAACGAATACCTGACCAATGCCGCAGCCTTGTCAGCGGCTggccagcgccagcagcaacagcagcagcagcaacatccgTCGCTGTCGGAGCCACCGGGCAGCGTGGGTCAGCCCTATAAGAAGCAGCGCTTGAGCGATGCCAATGTCAGCAACATGAATCACCTGccacatcagcaacagcaacagcaacagcagcagcagcagcagcagcagcagcaaccaccacAGCAACGTTCTTCACCCGCTCAGCAACACAATAGTAGGCAGAGCAATCATGAGGCGGAGCAGTCGCGCCGCGTGTTGCACATGTCCGCTGGCTCGGTGCTGACGCCGCTGGCCATGCAGCAGCTCAAGGTAGAAacgctgccacagcagcagcaacagcagcagcaacaacaacagcagcagcagcagcagctcacatCGCAGGTGCATGCGTCACGTGGCTTGGTGCCGCCGCCAACGGTGTCAGCAGCCAATGCGCTGATCAGCTTCTCcacgaacagcagcaacagcagcagcagcaacattaacaacaacagcagcagcgcccattccgcagtagcagcagcagcagcggcggcggcagcagcagcagcgagcagctcGGAAGCATACCATCCACAGGTGGAGGCCATTTCACCGACGCTGCCCAGCGACAATGCAGAGGAGCGagcgcgcagcagcagcagcagcagtagcaacaacaacaacaacaataatgccagtagcagcagcagcggcggcagcagcaataacagcggcaacagcaacagcagcaacaacagcgccaaGGAGGATCTGCTCATGCAAATCCAGCGAGTGGACAATGAGATCAAATGCGCCGAGACGACCATGGAGACGctgaagaagaaggagaagacgCTGCTGGACGAGGCGGCGGCCACGCTGGCCACAAGCAAGCAGCAGAAGGCAGCCGCCGAGCAGGCGGCGGCTGAGAGCGGCAACGAGCTCTGCATGGAGCTGGGCTGGCGCATCCAGATGTTGGCCCAGAGCGTCTACGAGGCGAACCGCAAGACGGCCGCCGCACAACATTCCGCGGTGAGCGAGGCGGGCGGCGCGAAGAGTACGCCACGCCCCTGGCTGCCGCTCTACAATCAGCCGCTCGACGTGGAGGCCCTGTCGCAGCTGATCAAGCGCCATCAGACACTGGTGCGAGCCCCGTTGCTCGTGCACATACGCAAGCTGAAGGCCGATCGCTGGGAGTACAACCAGAGCCTGGTGGAGAAGTATACGAAGGATCAGGCCGATTGGCAGCGACGCTGCGAGCGGGCCGAGGCCAAGCGGAAGACGCGCGAGGCCAAGAGCCGCGAGTCCTTCGAGAAGGTGTTCACGGAGCTGCGCAAGCAGCGCGAGGACAAGGAGCGCTTCAATCGCGTCGGCTCGCGCATCAAGTCCGAGGCCGATCTCGAGGAGATCATGGATGGACTGCAGGAGCAGGCACTGGAGGACAAGAAGATGCGCTCCTATGCCGTCATACCGCCCCTGATGTACGATGCCCGCCAGCGCCGATGCGCCTACCACAACGAGAACGGGCGCATCGAGAACATGATCGTCGTCCACGAGGAGCGCAAGGCCTTGAACCTGTGGACGGCCGGCGAGAAGGAAACGTTCAAAGAGAAGTATCTGCAGCACCCGAAGAACTTTGGTGCGATCGCCGCCAGCTTGGACCGGAAGTCGCCGCAGGATTGCGTCCGCTATTACTACCTCAGCAAAAAGACGGAGAACTACAAGCAGCTGTTGCGCAAATCCCGCCAACGCACACGCAGCAGCCGGAACCCGGCCAAGGCGCAGGCCCAGCTGCCGCAGTGCATCATCGACTCGCTGACGACGGGCGTCACGACACGCCTGCagcgcgagcagcagcagaagtccGGCAATCGCTCCAGCGCCGTTGCCGAGCGCGAGCGCGCCGAACGAGCCGCCGAGCGGGAGCGCGTCGCTGAGAAGGCGGCCGCCGACGCCGCCAAGGCGGCCGAGTGCGCCGCCGAGAAGGCGAGCGCAGTCAGCAAGGCTGCCGAAGCGGCTGCCGGCAGTGAGAAGGTGGCCAAAAACGCGAgcattgcagctgcagcagccgcggccgcggcggcggcgacgtcAACGTCGTCGGCAACGGCgagtgcaacagcagcagctgcggatAAGAGCGACGCTGGCAAGGCGAATAAGaatgcaacagctgcagcgggagcgggagcggcggctgcggcagctgcagcaactaaAACGGAGATCTCaacgggcagcagcagcagcagcagcagcagcagcgacgccaaAGCCAAAACCGCTGAGGAGgaagcgccagcaacagcagcgacaggagcaacggcgacggcaaaTGCTTCAGCCAATGTTGCCGCTGAGGCAGCTGCCGccactgttgctgccactgctgctgcgcccACGCCCAAAGCAGCCAAGGCCCAGCAGGGCGAGGGCAAGGCGGCCAACACTGCCAAGGCTGCGGAGCAGGCAGCCGAATCGGACGAGCAGCAGGCCGCTAAGGGCAAGGCGACGGCTGCCGATGGCTACAGTGCAACTGGCGCCGCTTCAGCCAATGCCACGACGGCGGCAACGCCAGCGGTCAGCGTGGCCATCAACGGCTTTAAGCCCGGCTACCAGAGCGTCGTCATGTCCAACGTTAAGGCGCCAGCGCCCTCATCCGGCGTGGACGAGGCTGCCACAggagctgctgcaacagcggctgctgcaacGTCGACAAATACAACTGGCGATAAAATCGTGAAGACGACGTCGACTgcggcagcaacggcggcagccGCTGGCTTCGCTGTGCCCAATGCGGCAACCGCAGCGACGGAGCCCGCGAGCGGCGTGGCCACGCTCACGACGGCCACGACCGCTGGCAACTACTTGGGCCAGAAGCTGAAGGCGGCGCAAGTGGAAGGACTTGGCGCTGGCAATGAGCTGCACGCGGACGTTAGCGATGCCAAGAAGAAACGCTTCGAGCTGGCGGCTGGCGAGTCCAGCgtcggcagcaacagcaacaacaataataacaacaacaacaacaacaacagcagcagcagtagcaacaacaacaacagcggcaacagcagcaacatcaaacTGAACGCCAGCGATGCGTCCACCCAAATCTCGTCCATTGGCAAAGGCACAGGCAGTGGCTCCGCCTTGGCGCCCGCCTCCTCGTCCTCATCCTCGTCGTGCTCGtcctcgtcgtcatcgtcatctgTCATGTTTATTAGCGCTGCATCGCTGATATCGACAGCATCGTCGCCGTTGACGACGGCAACAGGAACTGGAACCGGAACCGGAACAGGAACTAGGCCTACGACAACGCCAACGTTAACCACGCCAATGGTCACAGATCGCGCGGGCAATTTGTTGAGCACCTCCGAGGTGCTGGCATTGGATGTCAAAGATGCAAGCTCGAATTCAGTTACCGTTTTACCTGTAAAGCTCTAG
Protein Sequence
MEQQQYVKSLGHLQSQHQQQQQQQQQQQQQMHHHHHQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSRSAASPLSPPRPGPGSAAAAAAANSYAKFADAPQHFIQSPAYSIGIAPVANYHRESPFMRIPQLQASVPEFQRAARAATVAAAAAVAVGGGKGGPGSSSGSNIGVVSSAAGPGSGSSGGVVQVAGSMAPPGAQPGGVLVMEAMSLYQSLHYNNEYLTNAAALSAAGQRQQQQQQQQHPSLSEPPGSVGQPYKKQRLSDANVSNMNHLPHQQQQQQQQQQQQQQQQPPQQRSSPAQQHNSRQSNHEAEQSRRVLHMSAGSVLTPLAMQQLKVETLPQQQQQQQQQQQQQQQQLTSQVHASRGLVPPPTVSAANALISFSTNSSNSSSSNINNNSSSAHSAVAAAAAAAAAAAASSSEAYHPQVEAISPTLPSDNAEERARSSSSSSSNNNNNNNASSSSSGGSSNNSGNSNSSNNSAKEDLLMQIQRVDNEIKCAETTMETLKKKEKTLLDEAAATLATSKQQKAAAEQAAAESGNELCMELGWRIQMLAQSVYEANRKTAAAQHSAVSEAGGAKSTPRPWLPLYNQPLDVEALSQLIKRHQTLVRAPLLVHIRKLKADRWEYNQSLVEKYTKDQADWQRRCERAEAKRKTREAKSRESFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMYDARQRRCAYHNENGRIENMIVVHEERKALNLWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAQLPQCIIDSLTTGVTTRLQREQQQKSGNRSSAVAERERAERAAERERVAEKAAADAAKAAECAAEKASAVSKAAEAAAGSEKVAKNASIAAAAAAAAAAATSTSSATASATAAAADKSDAGKANKNATAAAGAGAAAAAAAATKTEISTGSSSSSSSSSDAKAKTAEEEAPATAATGATATANASANVAAEAAAATVAATAAAPTPKAAKAQQGEGKAANTAKAAEQAAESDEQQAAKGKATAADGYSATGAASANATTAATPAVSVAINGFKPGYQSVVMSNVKAPAPSSGVDEAATGAAATAAAATSTNTTGDKIVKTTSTAAATAAAAGFAVPNAATAATEPASGVATLTTATTAGNYLGQKLKAAQVEGLGAGNELHADVSDAKKKRFELAAGESSVGSNSNNNNNNNNNNNSSSSSNNNNSGNSSNIKLNASDASTQISSIGKGTGSGSALAPASSSSSSSCSSSSSSSSVMFISAASLISTASSPLTTATGTGTGTGTGTRPTTTPTLTTPMVTDRAGNLLSTSEVLALDVKDASSNSVTVLPVKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00509758;
90% Identity
-
80% Identity
-