Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_035047625.1
Location
JAWNPI010000109.1:14852776-14854472[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.4 4.5e+03 -2.2 0.1 4 17 26 38 24 45 0.56
2 3 7.4e-08 7.5e-05 22.7 0.0 4 38 307 344 304 345 0.87
3 3 2.6e-07 0.00027 20.9 0.1 3 43 400 445 398 447 0.80

Sequence Information

Coding Sequence
atgGAGTTGCACATCGGAACCATACTGCCAACGATATTATTTGGGCTACTGCTATTATGCGGCTCATCCAACGCCTGGCACTCCGAGGAGCTGGAGATTTTCGACCTGGTCGAAGAGGTCAACAAGAACTTCTACGAATTTATGGGCATCAATCAGACTGCCACGAACAATGAAATAAAGCGCGCCTTTCGCACCCTCTCCATTGTGCTGCATCCCGACAAAAATCCGGCAGAGGATGCCAACATTCAGTTTCGCAACCTCGTCTCCATCTACGAGGTACTTAAGGACGCATCTAAGCGTGAAAAATACGATAAGGTATTGCGCGATGGCATGCCCAACTGGAAGTCCGCTCTCTATTACTATCGCCGAATGCGTAAGATTGGCCTGTACGAGGGCGCCTTTATCATATTCCTGATCATTACCGTGGGCCAGTATCTGTTCGCATGGGCCTCGTATCTGGAGACAAAGTACACGGCCGAGCAGGTATTCGGCACCAAGCTGAAAAAGCTGCAGAAACGCAATAAGAACATTGATATGGACGTCATTCTGAACGAGATTCCGATGCCTTCGCTGCTCAATACTCTGCCCATTCAGATACCACTcgccatttggcatttgcctagaacaataaaaaatggaTTTAGCAAGGCCAATGAGCTCAAGCAGATGGCATTGGAAAAGCGCCGGCTAGAAATCGAAGAGGCACGTCGCCTGGAGGAACAGGAGCGTGAAGCCGAAGAGCAGGTGCGTCTACGTAAAGAGCAGAAGGAGAACTTACGTAAGCGCAAGCAAAATGCAAAGGCGCCCGAGAAGACCGAGGAGGAGTTGCGTGGCTACTCGCAGATCCAGGCACGAGAACTGACCGAAGACGATGCAATCCGTCCAGCTGCCCAAAAGAGTACGGTCAGCGGCGGCTTTTGGACCGATGAGGATCTAACGGAACTGATTAGGCTAGTTAAGAAATATCCCGGTGGTGCTGGCAGTCGCTGGAACACTATAGCCGAGTCGATGAACCGCACCGTGCAAGAGGTGACATTCATGGCGGCCAAGATGAAGGAGAACGGCTATCGTCTACCAGGCCAAACGGATAGCGTTGCCGAGCACATAGTCCAGGAATCCCAGGATGCCGTTCGAAAAGAGAAGATCAAGAAGCTGACGCCAACCGTGAATGAGAAGAGCATGCTAATACCAGAGACTAACTGGACCCAGGATCAGCAGCGCGCTCTCGAGGCGGCCATTGTTAAGTACCGCAAAACTGCCGGCGGCGATCGTTGGGTAAAGATTTCGAACAGTGTGCCGGAAAAGACTAAGGAGGAGTGCTTAGTGCGCTATAAGTACTTGTGCGAACTGGTCAAGACACAGAAGAAGGCCGAGGTTGAGGAGGCGGACGCCTCGAAACCGGACGGCGAGGAGAAAGAGGTCGTAGAGGAAACAGCTGAGGAGACGCCAGCggctgttgctcctgctgcagcgCCAGCTAAAAAGCTGAGCAAACGCGAGCAGCGACGACGCAAACGCGACTTGTCCAGCGATGAGGACTCTGACGATGCATATCAATATGAGATCAGTTAG
Protein Sequence
MELHIGTILPTILFGLLLLCGSSNAWHSEELEIFDLVEEVNKNFYEFMGINQTATNNEIKRAFRTLSIVLHPDKNPAEDANIQFRNLVSIYEVLKDASKREKYDKVLRDGMPNWKSALYYYRRMRKIGLYEGAFIIFLIITVGQYLFAWASYLETKYTAEQVFGTKLKKLQKRNKNIDMDVILNEIPMPSLLNTLPIQIPLAIWHLPRTIKNGFSKANELKQMALEKRRLEIEEARRLEEQEREAEEQVRLRKEQKENLRKRKQNAKAPEKTEEELRGYSQIQARELTEDDAIRPAAQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRTVQEVTFMAAKMKENGYRLPGQTDSVAEHIVQESQDAVRKEKIKKLTPTVNEKSMLIPETNWTQDQQRALEAAIVKYRKTAGGDRWVKISNSVPEKTKEECLVRYKYLCELVKTQKKAEVEEADASKPDGEEKEVVEETAEETPAAVAPAAAPAKKLSKREQRRRKRDLSSDEDSDDAYQYEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616831;
90% Identity
iTF_00519850;
80% Identity
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