Basic Information

Gene Symbol
CDC5L
Assembly
GCA_035047625.1
Location
JAWNPI010000103.1:869282-871904[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.7e-17 3.7e-14 52.5 1.8 2 46 9 54 8 54 0.97
2 2 9.1e-12 9.3e-09 35.2 0.2 1 42 60 100 60 104 0.95

Sequence Information

Coding Sequence
ATGCCGCGTATTATGATCAAAGGCGGCGTCTGGCGCAACACAGAGGATGAAATTTTGAAAGCGGCTGTAATGAAATATGGCAAAAATCAATGGAGTCGCATTGCCTCGCTGCTGCATCGCAAGTCAGCCAAACAGTGCAAGGCACGTTGGTACGAATGGCTTGATCCGAGCATCAAGAAAACCGAATGGTCCCGCGAGGAGGACGAGAAGCTGCTGCATTTGGCCAAATTGATGCCGACTCAGTGGCGCACGATTGCGCCGATAATTGGACGCACTGCAGCACAATGCCTGGAGCGCTACGAGTGTTTGCTCGACCAGGCGCAGCGCAAGGAGGATGGAGAGGACACCATGGACGACCCGCGCAAACTGAAGCCGGGCGAGATTGATCCCAATCCAGAGACCAAGCCTGCACGACCCGATCCCAAAGACATGGATGAGGACGAGCTGGAGATGCTGTCCGAGGCTCGTGCTCGCCTCGCCAACACACAAGGAAAGAAGGCTAAGCGCAAGGCGCGCGAAAAGCAGCTCGAAGAGGCGCGTCGCTTAGCCACGCTCCAAAAACGTCGTGAATTGCGCGCCGCCGGCATCGGCAGTGGCAATAGGAAGCGCATTAAGGGCATCGATTACAATGCAGAGATTCCCTTCGAGAAGCGACCGGCCATTGGCTTCTACGACACCTCCGAGGAGCATCTGCAGAAGCAGGATCCAGACTTTAACAAAATGCGCCAACAGGACTTGGATGGAGAGCTGCGCTCCGAGAAGGAGGAGCGGGAGCGCAAGCGTGATAAGCAGAAGCTCAAGCAGCGCAAGGAGAACGAAGTGCCATCGGCCATGATGCAGAGCTTGGAGCCGGAGCGCAAGCGCTCGAAGCTTGTCTTACCGACGCCTCAAATTTCGGACATGGAGCTGCAGCAGGTCGTCAAACTGGGTCGGGCCAGTGAGATGGCCAAGGAGATAGCGGGCGAGAGCGGCATCGAGACCACAGACGCTCTGCTGGCCGACTACTCCATAACGCCTCAGATAGCAGCCACGCCCCGTACCCCAGCGCCCTATACGGATCGCATAATGCAGGAGGCGCAGAATATGATGGCGCTCACCCACACCGAGACACCTCTCAAGGGCGGCCTTAATACGCCGCTGCATGAATCTGACTTCTCGGGCGCGCTGCCCAAGGCGGCGGCCATCGCTACTCCAAATACTGTCATTGCCACGCCCTTCCGTACGCAGCGCGAGGGCGGAGCGGCCACACCGGCGAGCTTCCTAACGCCCGCCTCCGGCGCCTTGGTGCCCATGCTGAAGAACGGCGtcgccggcagcagcagcgcaacgCCCGCCTTCGTGCGCGATAAGCTTAGCATCAATGCGGAGGAGAACATGGCTGTGACCGAGACGCCGGCCATCTACAAGAACTACCAGAAGCAGCTGAAATCAACGCTGCGAGAAGGACTGGCCACGTTGCCAACGCCACGCAACGATTACGAAATCGTGGTGCCGGAGCAGGAGGATAACGAGGCAATGGAGACGAGCACGGAGCCAGCGATCGAGGATCAGGCAGATGTGGATGCGCGCATGCTGGCCGAGCAGGAGGCGCAACGCAAGCGCGAGTTGGCCAAGCGCTCACAGGTTATCCAGCGCAACCTGCCCCGGCCGACGGAGGTGAACACCATGATTCTGCGACCACAGTCCGAGAAGCAAAATCTaaccgagcagcagcaagcggAGGAGCTGATAAAGCACGAGATGATCACCATGCAGCTTTACGACTATGTGCGTGATCCCGTGCCTGGGCAGTCGCAGCACAAGCTCGAGCAGCTGCAGAGCTTCTTCAAGGCCAATCCGTATGAGGAAATCTCGCAGGAGGAGCTGGCTGAGGCCAAGCAAATGCTGGCCGACGAGATGGAAGTGGTCAAGGAACGCATGGCCCATGGCGAGCTGCCACTCGATGTGTACGCGCAGGTGTGGCAGGAGTGCCTGGGACAGGTGCTCTATCTGCCCTGCCAGAATCGTTACACGCGCGCCAACCTGGCCAGCAAGAAGGATCGCTTGGAGTCGGCCGAGAAGCGACTTGAGCAGAACCGACGTCACATGGCCAAGAAGGCGAAGCGCTGCGGCAAGATTGAGAAGAAGCTGAAGGTACTCACCGGCGGCTATCAGGCGCGCGCCCAGGTGCTGATGAAACAGCTGCAGGACACCTACGCACAGATCGAGCAGAACTCGCTCTCGCTGTCCACATTTCGTTATCTCGGCGAGCAGGAGGCGATCGCTGTGCCGCGACGCCTCGAGGCGCTGCAGGAGGATGTGCGCCGGCAAATGGAGCGCGAgaaggagctgcagcagaagtACGCCAGCCTGGCCGAGCAGCGCGACACGCTCTtccagcagctggagctaATAACGGGCAACAGACCCACtgcacagcagctgctcggcttggagcaggagctgcaagcatag
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYECLLDQAQRKEDGEDTMDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLATLQKRRELRAAGIGSGNRKRIKGIDYNAEIPFEKRPAIGFYDTSEEHLQKQDPDFNKMRQQDLDGELRSEKEERERKRDKQKLKQRKENEVPSAMMQSLEPERKRSKLVLPTPQISDMELQQVVKLGRASEMAKEIAGESGIETTDALLADYSITPQIAATPRTPAPYTDRIMQEAQNMMALTHTETPLKGGLNTPLHESDFSGALPKAAAIATPNTVIATPFRTQREGGAATPASFLTPASGALVPMLKNGVAGSSSATPAFVRDKLSINAEENMAVTETPAIYKNYQKQLKSTLREGLATLPTPRNDYEIVVPEQEDNEAMETSTEPAIEDQADVDARMLAEQEAQRKRELAKRSQVIQRNLPRPTEVNTMILRPQSEKQNLTEQQQAEELIKHEMITMQLYDYVRDPVPGQSQHKLEQLQSFFKANPYEEISQEELAEAKQMLADEMEVVKERMAHGELPLDVYAQVWQECLGQVLYLPCQNRYTRANLASKKDRLESAEKRLEQNRRHMAKKAKRCGKIEKKLKVLTGGYQARAQVLMKQLQDTYAQIEQNSLSLSTFRYLGEQEAIAVPRRLEALQEDVRRQMEREKELQQKYASLAEQRDTLFQQLELITGNRPTAQQLLGLEQELQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00679419;
90% Identity
iTF_00534507;
80% Identity
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