Dmer001103.3
Basic Information
- Insect
- Drosophila merina
- Gene Symbol
- srp
- Assembly
- GCA_035047645.1
- Location
- JAWNPH010000002.1:8211304-8219990[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-19 2.6e-16 59.1 3.2 1 35 837 870 837 871 0.97
Sequence Information
- Coding Sequence
- ATGACCAAGACCAGCAAGACGAAGGACAAAAGCGCCATTTCGGGCGGGGGCGGTGGCGCCAACGGTGGAGCCATGGGGGGACCCAAGGTCGGAGGCAGCCTCCTCGCCAACGCGGCCGACATGAAGATCTTGAAGGCAAAGTCCAATGCCAACGCCaagctgcagcagcaaaagcaggGGCAGCAAGGACGAAGTGCACTCGGCTCGGCAGGATCAGCCGCGAAAGGGACGGCGATAGCGGCGAGCGAAGCGCTGGAGCCGACGCTTACCGAGGCAGAGACGCCGGCATCGACGCAACCGCCGACAGCAGCGCCGACCGAGGCGAATTTATCGTCACTTGAGTCCGCGCGCTCGCAGGCTCACACTTCAATTCAATTCGAACCAGCGAGGCAAGCGGTTGCCGCAGCAACAAccacagaaacagcaacagaaataGTAGCAGAAAGTGCAGTAgaaactgcagcagcaacagcggcGATCAGCGACGATCGGAGTGCGAtaaacgacgacgacgacgcgAGTGAAAGTGTTGataacaaaatcaaagtgATAAACTATGCCCATCAGCCGCAGGCTGAGGCAGAggtgcaactgcaacatcaGCATATCTACGAGCAGCAGCAGTTTTTAAGCCAACAAATAATCAgtcagcaggagcagcaacagcagcaactacaacagcagcaacatcagcaacaatCATTGCAATCGCAGCAAGGAGCACCGAATCAGGAGCAACAACACCAGGCCGGTTGGCTGGCTTACGACTTGACCAGCGGatcagcagcagcggcggcggcagcagcagcagcagcagcggcgggaACAGTGACCGAGAAGTCCGATCTGTACGCCTTGGCGGCGTCGCACCACTTCTTCAGCCACTTGCCGTATCCGGCGAGTCATCCGCCCACCCAGCTCTACGAGCACTACCAGAGCATCACCGGCGCCAGCACGGATCCCATAATGCGGAACAACTTTGCGCTATACAGCGTCTACGGGGGCGGTGGAGGCGGAGTAGGTGTGGGTGTACCGAGCCATGAGCCCCTGCCCCAGCATGTGGtggccgcagcagcagccgcggcggcagcagcagcccacAACTCCACGCCCAACATCGACGAGGTCATCCAGGACACGCTCAAGGACGAGTGCTTCGATGATGGGCACAGTACGAGCTACCACATGCTCACCTCCGTGGCGGATCTGCACACCCTGAAGGACAACAGTCCGGTGGGCACCATCTACTCCCTAACCCACGACCAgctcctccagcagcagcagcaccagcagcaactccaccaccagcaacaccatcaccagcagcagcagcaacagcagcaatccCTGTACCATCAGCAACATCATCACAACACGTCGACCAGCTCGGCTGGCGGGGATTCGCCCTCATCGGCCCATGCACTCCAGAGCTTCACCCAGCTGACCAGCGCCACCCACCGGGACAGCCTCTCGCCGGCGGAGCACGGCGGGTACTTTGGAGCCACCACCCAGCTGAGTCCCAGCCTGCAGACCAGTTCTGTTTATGCTGGACCCTTGCTGACCCAAACCACCAATGGCATGCAGTATGGAATGCAATCGCCCAACCATACGCAAGCCCacctgcagcagcaacaccaccagcagcatcagcaccagcagcaccaccagcagcatcagcaccaccagcaccagcagcagcaccaccacaaCTCCACCAGCAGCAGTCCTGGGCCGGTGGGTCTGCTCCACTCGGGCTCGTCGTCCGCCACGGCGGCGGTCAACGGGCACACCAGCTCTATGCTGGAGGATGGTTACGGATCGCCAAGGAGCAGCCACagtggcggcggtggcggaaGTGTAGGAGGTGGCACGCTGCCGGCCTTCCAGAGATTCGCTTCCGCCAGTAGCGGGTATGGCAGTGGCGTGGCCAATGGCTCGGTCAGTGGCGCCGAACGCAGCTGTTACGCTTCGGTGCCCCATTTGCGCGGTCAGAACGAGCCCTGGGGCTATGACCAAATCAGTTACGCCTCGGCCACACCTGGCCAGCAGTTGGGAGTCTCCGTTGGAGCTGGCGTCATACGGAACGGACGGGCCATCACGGCGGCCAATGCTGCCGCGGCAGCAGCCGCAGATGGATCGGCGGGACGCGTGGATGCGGGATTCCTCTCCGCCTCGGCATCGCTGTCAGCAACATTTATCGATGCCGATATTTTCACTGAGGGGCGAGAATTGGCCGCTGAATCAGGCGGGGATTTCTATAAGAACTACTCATTTAATGTGGCCggcagtggcggtggcggtggtcGTAGTAAGGCCAACACCAGTGCCGCCAATTCGCAGGCCAGCTTGTCTGGATCCTGTCCAGCTTCGGGTATAACGTCGACATCGACGACGGCACAAACTACGGCGGCGACGGCGGCAACGTCGGGAGCGACGTCAACGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCATGaGCGCCCAAAAGCGTGCCGGACTGTCCTGCTCGAACTGCCACACCACCTACACATCCCTGTGGCGACGCAATCCCTCCGGAGAGCCAGTCTGCAATGCCTGCGGTCTGTACTTTAAACTCCACAACGTGCCAAGGCCGTTGACCATGAAAAAGGATACTATTCAGAAACGAAAACGCAAACCAAAGGGCACCAAAAGCGAAAAACCCAAAAAGCTTAAGACCGCCTTGAGGAGCACCCTGGACAGTGGATCCTTGTCCGCCAATTGCCAATTGGTTGGCCATTTGAACAGCAGCCAAATGGGTGTCGATGGCAATGACGAAATGAAACCATATATGCCATACAcatcgcagcagcaacagcagccacaacatcagcagcagcagcataaTAATAATCAGCAATCCATGGCTGACCAGCACTCATCGGCGGCCAGCTCGCCCCATAGCATGGCATCCTCATTATCGCCATCAGCCACATCACATCACCAAAATCCCCACCAACAGCACTGCTCCGGCCTGGACATGTCCCCCAATTCGCCCTACCAAATGTCCCCCAtcaacatgcaacagcagcagcaccagcagcagcaaacgTTCAGCATGCAGCATTCACCCAGCACACCCACATCCATCTATAATACTTCATCGCCCACCCAACACCTccacaataacaataacaatagcaCACtattcaacaacaacaataatagtAGCAATGAGAATAACAACAAATTTATACAGAAATATCTGCAAGCTCAGCAGAACGGGAACGggagcagcaacaccagcaccagcgagcaacagcaacagcttcTGGCCCACCTGATGCCGAGCTCGATtacggcggcagcagcagctgcggcagcggcagcggcggcagccATCAACACGATCAAGTCGGAGGCCTCGGTATCCTCGGTATCCACTCCGCTGGCGAGCTCAATACCGACCGCGGCATCAACCCCATTATCCTCGCTGAGcctcaacagcaacagcagcaccaacaacaacaacagcagcattATCAATCTGCAAAACCCATATCAACAGTTGGTACAGCTTGGACAGGTGGGGACGCCGTTGTTTAAGTCCGGACGCACCACTCCGTCGTACTATCTTTCGCCCGAGGGCGACGATGCAGCGACCCACATTAAGCTGGAGCAGATGGATCAGCagcagggacagggacagggaacgcaccaccagcaacagcagcaggagcacgGGGAACTGATGCTGGCCCGGTCGGCCTCGTTGGACGAGCACTACGAACTGGCCGCCTACCAGCGACAACACCATCAGAatctccagcagcagcagcaagagcAGATCGCCAACTATGCCATGCAGTTGCACGAAATCGAACGTAAATTCGCCAGCGTTGAGAGGGACACGGTGGTGAAAATGGAGTAA
- Protein Sequence
- MTKTSKTKDKSAISGGGGGANGGAMGGPKVGGSLLANAADMKILKAKSNANAKLQQQKQGQQGRSALGSAGSAAKGTAIAASEALEPTLTEAETPASTQPPTAAPTEANLSSLESARSQAHTSIQFEPARQAVAAATTTETATEIVAESAVETAAATAAISDDRSAINDDDDASESVDNKIKVINYAHQPQAEAEVQLQHQHIYEQQQFLSQQIISQQEQQQQQLQQQQHQQQSLQSQQGAPNQEQQHQAGWLAYDLTSGSAAAAAAAAAAAAAGTVTEKSDLYALAASHHFFSHLPYPASHPPTQLYEHYQSITGASTDPIMRNNFALYSVYGGGGGGVGVGVPSHEPLPQHVVAAAAAAAAAAAHNSTPNIDEVIQDTLKDECFDDGHSTSYHMLTSVADLHTLKDNSPVGTIYSLTHDQLLQQQQHQQQLHHQQHHHQQQQQQQQSLYHQQHHHNTSTSSAGGDSPSSAHALQSFTQLTSATHRDSLSPAEHGGYFGATTQLSPSLQTSSVYAGPLLTQTTNGMQYGMQSPNHTQAHLQQQHHQQHQHQQHHQQHQHHQHQQQHHHNSTSSSPGPVGLLHSGSSSATAAVNGHTSSMLEDGYGSPRSSHSGGGGGSVGGGTLPAFQRFASASSGYGSGVANGSVSGAERSCYASVPHLRGQNEPWGYDQISYASATPGQQLGVSVGAGVIRNGRAITAANAAAAAAADGSAGRVDAGFLSASASLSATFIDADIFTEGRELAAESGGDFYKNYSFNVAGSGGGGGRSKANTSAANSQASLSGSCPASGITSTSTTAQTTAATAATSGATSTLDEHVSRANSRRMSAQKRAGLSCSNCHTTYTSLWRRNPSGEPVCNACGLYFKLHNVPRPLTMKKDTIQKRKRKPKGTKSEKPKKLKTALRSTLDSGSLSANCQLVGHLNSSQMGVDGNDEMKPYMPYTSQQQQQPQHQQQQHNNNQQSMADQHSSAASSPHSMASSLSPSATSHHQNPHQQHCSGLDMSPNSPYQMSPINMQQQQHQQQQTFSMQHSPSTPTSIYNTSSPTQHLHNNNNNSTLFNNNNNSSNENNNKFIQKYLQAQQNGNGSSNTSTSEQQQQLLAHLMPSSITAAAAAAAAAAAAAINTIKSEASVSSVSTPLASSIPTAASTPLSSLSLNSNSSTNNNNSSIINLQNPYQQLVQLGQVGTPLFKSGRTTPSYYLSPEGDDAATHIKLEQMDQQQGQGQGTHHQQQQQEHGELMLARSASLDEHYELAAYQRQHHQNLQQQQQEQIANYAMQLHEIERKFASVERDTVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615250;
- 90% Identity
- iTF_00615250;
- 80% Identity
- -