Dmer017838.3
Basic Information
- Insect
- Drosophila merina
- Gene Symbol
- kn
- Assembly
- GCA_035047645.1
- Location
- JAWNPH010000089.1:18050996-18072190[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-233 3.3e-229 762.3 0.0 38 384 76 451 54 455 0.97 2 2 6.4e-07 0.0026 16.3 15.7 422 519 456 553 451 571 0.63
Sequence Information
- Coding Sequence
- ATGTTCGCGCCGAGAAGAAGTGCGCGAGTTGCCCAAACcgaaatcgaaagcgaaatgACAGCGGGCTTTGTCCATTCAGCGGCGGCAAATCATCATTCCACCCACCTGAATCCAAACTCGAACTCTAACCCGAATCCCCACCCGCACCACAATCACAATCAGCTACAAAGACAGGACAATCTTGGCCAGGATCTTAACCACAATCAGACCTTAAACAATAAGACAATGCGCTGTGATACAAGTTTGGGCATTGGCCGCGCCCACTTTGAGAAACAGCCGCCCAGCAATTTGCGGAAGTCGAACTTCTTTCACTTCGTGATCGCCCTCTACGATCGAGCTGGCCAGCCCATCGAGATCGAAAGGACAGCCTTCATAGGCTTCATCGAAAAGGACTCGGAGTCGGATGCCACCAAGACGAACAATGGCATTCAATATCGACTGCAACTGCTCTATGCCAATGGAGCCCGCCAGGAACAGGACATATTCGTGCGTCTCATCGATTCGGTGTCCAAGCAGgCCATCATATACGAGGGTCAGGACAAGAATCCCGAAATGTGTCGAGTCCTGCTAACGCACGAGGTGATGTGCAGCCGCTGCTGTGATAAAAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGCTTCTTTCTCAAGTTCTTTTTGAAGTGCAATCAAAATTGTCTGAAGAATGCCGGAAACCCGCGGGACATGCGCAGATTCCAGGTGGTCATCTCCACACAAGTGGCCGTCGATGGCCCACTCCTGGCCATCTCCGACAACATGTTCGTGCACAATAACTCGAAGCACGGACGGAGGGCCAAGCGACTGGACACCACGGAAGGTACAGGCAACCAATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGATTGTATCCACCTCTGCCAGTGGCTACGCCCTGCATCAAGGCCATCTCGCCCAGTGAGGGCTGGACTACCGGCGGCGCCACGGTGATCATAGTGGGCGACAACTTCTTTGATGGCCTCCAGGTTGTGTTCGGCACCATGCTGGTCTGGAGCGAGCTGATCACCTCACACGCAATCCGGGTGCAGACTCCGCCACGGCACATACCCGGCGTGGTAGAGGTCACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAGGGATCACCCGGACGCTTCGTCTATGTCTCAGCTCTCAATGAACCCACAATCGACTATGGTTTCCAGCGCCTGCAAAAGCTCATTCCCCGTCATCCTGGCGATCCGGAGAAGCTCCAAAAGGAGATCATACTGAAGCGGGCAGCCGATCTGGTCGAGGCTCTCTATTCCATGCCGAGCAGATCCCCGGGAGGTTCAACGGGCTTCAACTCTTATGCCGGCCAGTTGGCGGTCAGTGTACAGGATGGCAGCGGTCAGTGGACCGAGGACGACTACCAACGCGCCCAGTCGAGCAGTGTGAGTCCGCGTGGCGGCTACTGCAGTAGCGCCTCCACACCGCACAGCTCGGGCGGATCCTATGGGGCAACTGCAGCCAGTGCAGCAGTGGCAGCCACCGCCAATGGATATGCACCCGCTCCGAACATGGGTACGCTGTCCTCCTCGCCGGGCAGTGTCTTCAATTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCACCATCATGCGGCAACCGCCCATCCGCACCACTATCCGCATCCCCACCAGCCGTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTAA
- Protein Sequence
- MFAPRRSARVAQTEIESEMTAGFVHSAAANHHSTHLNPNSNSNPNPHPHHNHNQLQRQDNLGQDLNHNQTLNNKTMRCDTSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVSKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNQSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHAATAHPHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -