Dmer001564.1
Basic Information
- Insect
- Drosophila meridionalis
- Gene Symbol
- ct
- Assembly
- GCA_035045145.1
- Location
- JAWNPG010000009.1:10540069-10556800[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6e-27 5.3e-23 80.9 0.0 3 72 699 769 697 774 0.95 2 3 5.5e-32 5.3e-28 96.9 0.0 3 77 1195 1270 1193 1272 0.96 3 3 3.4e-31 3.2e-27 94.4 0.0 3 76 1465 1539 1463 1542 0.96
Sequence Information
- Coding Sequence
- ATGACACGCAAATTACCAATTGGCATTCGCCTGATTTGCGTCCTGTTCGGAGATGAGTTGCAACGCCTGCGCGCCTTGGAGCAAACTCACCTGGTACAAATCCAGAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGCTTGGAAGCTCGCTTGGATAAGCAGCAGATAAATGAGGCGCTCGCCGAGGCTACGGCATTAGCTGCCGCTGTTAATGCTGCTgcgacaaacaacaacaacaacaataacaacaatagcaacagcaacaacaacaacagcagcagcaacaacaacaacaacaatcacagtAGCcagagcagcgacaacaacaatgtcgTATTCAAGACAACTGATCTAACATCGACCCATCGGCAcaacgacgatgatgacgatgacgatgacaacGATCACGATAATGAGCTGCGCGACGCCGatggcgatgatgatgatgacctGCACATGAGCaacagcgagcagcagcagcagcagcagcaacactcaGCTCTAGTCAACAATCGCCACGACGATGAGCCGGACAAGGACGATGCCGAGGACCACGATGCCGAAATGTCGaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGACTTGAATGTGCTCAGTCCACAGTCGGCCATCGCCACAGCCGCCGCggccgccgcagccgctgcctgTGCCAACGATCCCAACAAATTCCAGGCCCTGCTACTGGAGCGGACCAAAGCACTGGCCGCCGAGGCGCTCAAGAACGGCAGCAGCGATGCCGTTAGCGATGAAatgccgcaacaacaacaagccgtAGAcgtagcaacaacagctgtagaagaagatgcagcagcagcagcagcagcaacagtaagcgccgcagcaacagttgccaagCCAGATTTGAATAGAGTTGGAACGAATGAGAATGAGACATTGGCCGAGGCCAATTTGCAGCCGAAAATCGAAATCTTAGACACAGACGaggctccagctgctccagccCAGACGCTCGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGTGGCTTCGAAACGAgcaccacagcagcagctgtagcagcaacagcagcagcaactgcagctccagcaacagcaacagcaacagctgccgctgcaacTGGGAGCAAAACGCCAACAATTTATCAAAATGCCAATGTggtgcagcagcaattgctgccaccaccgccaccgccacagcagccgcagcaacaacaacaacaacagcaacaacaacaacagcaacactatcaacaacaacaacaacagcagcaacagcagcaacaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCGCACGCCTAGATGCCGCCACACAccaccagctccagcagcagcaacagtctcagccacagcagcagcaactgctgcacaatagcagcaatagcagcaacagcagcatcgcCGGCAGCGATCCACTGAATCATCACCATCACGCCCACCACCATGGCCATGGGCATGGCCAACTGTTGCATACGGCTCACCATTTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAACAGCACACCGAACAGCACAGCCCAGCTGGCGGCGAGCATTGCTAGCACGCTGAACGGCAACAAGTCCCTGCTGCAGGCAGCGGCCGCTGCGAATGTGGCTGCggccgccgttgccgttgccgaggacaacaacaacagtctgACGCCCAATGCGAACGCGGCTGTGGCCGCCGCAGCTATGGCTGCCCATGCCCAGCATGCCGCCGCCCTGGGCGCTCCCAGTTTCCTGCCCAATCTGCCCAGCCTGCCATTCCAGtttgcagctgccgcagccgccggGCAGGAGGCGCGTGCGCATTTTCGGTTCGCGGACGCcgagctccagctgcagccagGTGTTTCCATGGCGGGTCGTTTGGGTGAATCGCTGATACCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCAAATCAGGCGCTCGACACGCTGCACATCTCGCGACGCGTACGGGAGCTGCTCTCCGTGCACAACATCGGGCAGCGTCTGTTCGCCAAATACATATTGGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTAAGCAAGCCGAAGCCCTGGGATAAGCTGACAGAGAAGGGTCGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGCGATGATAATGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGatTCTGGACTGCCTCAGTATGCTGGTCGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATCGCCTCGCACACATACTCAGCGAAGCCTCCTCCCTGATGAAGAGCAACGTGGTcgccgcccagcagcagcagcaggagcatcAGCGTCGTCATGCCAGCGACGATACACACAGCAACGATGACAGCAAATCGCCGCCGCAGAGCTGCAGCTCACCTTTCTACAAGGTGGAGCACCAgatcaagcagcagcagcagcagcagcaacagcagcaacagcagcagcagcagcagctgcacgtCTCCGACCATGCGCAGCGGGAGCAGCGCgaggcagctgccgccgccgccgccgttgccgtccaccagcagcagcagcagcgcgagcAGCGCGAACAGCGCGAGGCCGTTCagcgcgagcagcagcagcggctgcgtCACGAGGATCTCGCCCAGGACAAGATGGCGCGTCTTTATCAGGAGCTAATGGCGCGTACACCGCGTGAAGCAGCCTTTCCCAGCTTTTTGCTGTCGCCCTTCTTTAGCGGCGCCGCTGGCATGCCCGGAGCAGCCGCCAATCCATTCCCCGCCGCCATGGCCGCCGACGAGAACATGCGTCATGCGTTCGAGCGCGAGATCgtgaagctgcagcagcagcagcagcagcaacagcagcaggcgcaggcgcaggccGCCAGCTTTCCGAACTTTTCCAGCCTGAtggcactgcagcagcaggtgctgAACGGCGCCCAGGATCTGTCGCTGGCTGGCAAGGAGATCAAGCTGAACGGGCAGCGTTCGTCGCACGATCAgcacagcggcagcagcagctccaaggATGGCGAGCGCGGCGACGATGGCGATCGCAGCTTTCCCGCCCTGCCGCACGCCCGCAAATCGGATGGCGGCAACACGCCCGCTCCGCCCGCACCGCCCGTGGTCAATGCcgccggcagcggcagcaacccTATAGCGGGCaatgtcgccgtcgccgtcgccgtcggcAGCGGCCATGGCAGCAACTCAGCTGCACCCAGTCCATTGAGCAACTCGATCCTGCCGCCGGCTCTAAGCAGCCAGGGCGAGGAGTTTGCGGCGACAGCGAGTCCGCTGCAGCGCATGGCCTCCATCACCAATTCGCTGATTACACAGCCGCCCGTGACACCGCACCACTCGCAGCCGCAGCGACCCACCAAGGCGGTGCTGCCGCCCATCACGCAGCAGCAGTTCGACATGTTCAACAACCTGAACACGGAGGACATAGTGCGACGCGTCAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTCTGTTCGGCGAGTCCGTGCTGGGCCTGTCGCAGGGCTCCGTCTCCGATCTGCTCGCCCGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCCGCGAGCCCTTCATCCGCATGAAGATGTTTCTGGAGGACGAGAACGCGGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGCCCACAGATGCCGCAGGGCCTGGCCAACAAGATGCAGGCTACGCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGCCCAGGCGCAGCACATCATGCAGCAGATGCAGGCGGCGGCCGCCATGTCCGCggccatgcagcagcagcaggcagcggccGCCCAGGCGGCAGCCGTGCAGCAGGCCCaagcccaggcccaggcccagcagagccaccagcagcagcaggcccaggcccaggctcAGGCCCAGCAGCAGGCCCAGCAGTTGCTCCATCATCAGAACATGCTGCTGACGTCGCCCGGTCTGCCGCCCCAGCACGCAATCAGCCTGCCGGCGGCGAGCACACCAAGCGGCCCAACTGGAGGCAATCCCACATCCGTCTCCACGCCCGGCAGCAACGAGAAGAAGCCCATGATGATGCCCGTGCACGGCGGAGCGCATGCGCCCAATGCCATGCGCAGCCTGCACCAGCACATGTCGCCGACCGTCTATGAGATGGCCGCGCTGACCCAGGATCTGGACACGCACGACATAACCACCAAGATCAAGGAGGCGCTGCTCGCCAACAACATCGGCCAGAAGATCTTTGGCGAGGCGGTGCTAGGCCTCTCGCAGGGCTCCGTCTCGGAGCTGCTGAGCAAGCCCAAGCCCTGGCACATGCTCTCCATCAAGGGGCGCGAACCCTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAACGTtgagcggctgcagctgctcaagaACGAGCGGCGGGAAGCGAGCAAGCGCCGCCGCAGCACTGGACCCAACCAGcaggacaacagcagcgacacgTCCAGCAATGATACGAACGATTTCTATACGAGCAGCCCGGGTCCCGGCTCGGTGGGTTCCTCGGTGGGCGGGGCACCGCCTAGCAAGAAGCAGCGTGTGCTCTTCTCTGAAGAGCAAAAGGAGGCACTGCGTCTGGCCTTCGCCCTCGATCCCTATCCAAATGTCGGCACTATCGAGTTTCTGGCCAACGAGCTGAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTGCCACACGGCCAGCCCGGCCAGGACAATCCCATACCCAGTCGCGAGAACACCAATGCCACGCCCTTCGATCCCGTCCAGTTCCGCatcctgctgcagcagcggctcgTCGAGCTGCACAAGGAGCGCATGGGCCTGAGCGGTGCGCCCATACCCTACCCACCGTActttgccgccgccgctcTGCTCGGCCGCAGCTTGGCGGGCATTCCGGGCGCCGCGGCGGCTgccggcgcagcagcagctgcggccgcTGCCGTCGGCGCCGCCGGCGGCGATGAACTGCAGGCGCTCAATCAGGCCTTCAAGGAGCAGATGAGCGGCCTGGATCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGATGACTATCAGgacgagctggagctggacgCCAGCGGCCACAACATGAGCGACAACGAGTCCATCGAGGGCGGCCACGAGCCCGAGAACACGCCCATATCCGAGTACGAGAAGGCGCTGCAGAAGTCGGCGCTGGCCTCGGCCGCCGCTGGCTACTTGAACAATGCGGTGCGCAGTTCGCGCCGCAAGCCCGCCGCCCCACAGTGGGTGAATCCAGCTGGCGCCAGCACGCCGACAGCGGCAGGCGCTGTCATCGCAGccggcgacagcagcggcagcgagcGCATCATCAACGGCGTCTGCATCATGCAGGCCTCGGACTATGGGCGTGACGAGGGCGACAGCGTCAAGGGCGGCGACTCGAATGCCGATGCTGAGCAGGATGAGCATGCGCATCTGGAGATCGAGCAGCGCTTCATGGAGCCGGAGGTGCGCATCAAGCaggaggaggacgacgacgatgagcagacctcgcagcagcagcagcaacagcaacagcagctggacgATGAGAGCGCCGAGAAGCAGCTGAAGGTGATCAACGAGGAGAAGCTGCGCATGGTGCGCGTGCGACGGCTGAGCAGCAACGGCGACGCCGACGAGCACTGCGCCGCAGTGCAGCaggcgacggcagcggcagcggcggcagcagcagcggccgttgcggcagcagcaactgcgacgccagcagcagcggcagcagcgtgGAACTACTAA
- Protein Sequence
- MTRKLPIGIRLICVLFGDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNNSNSNNNNSSSNNNNNNHSSQSSDNNNVVFKTTDLTSTHRHNDDDDDDDDNDHDNELRDADGDDDDDLHMSNSEQQQQQQQHSALVNNRHDDEPDKDDAEDHDAEMSNATATADSNELKIKKEQHSPLDLNVLSPQSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGSSDAVSDEMPQQQQAVDVATTAVEEDAAAAAAATVSAAATVAKPDLNRVGTNENETLAEANLQPKIEILDTDEAPAAPAQTLEEQLVNSYWRRGFETSTTAAAVAATAAATAAPATATATAAAATGSKTPTIYQNANVVQQQLLPPPPPPQQPQQQQQQQQQQQQQHYQQQQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSARLDAATHHQLQQQQQSQPQQQQLLHNSSNSSNSSIAGSDPLNHHHHAHHHGHGHGQLLHTAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSNVVAAQQQQQEHQRRHASDDTHSNDDSKSPPQSCSSPFYKVEHQIKQQQQQQQQQQQQQQQQLHVSDHAQREQREAAAAAAAVAVHQQQQQREQREQREAVQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLLSPFFSGAAGMPGAAANPFPAAMAADENMRHAFEREIVKLQQQQQQQQQQAQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKEIKLNGQRSSHDQHSGSSSSKDGERGDDGDRSFPALPHARKSDGGNTPAPPAPPVVNAAGSGSNPIAGNVAVAVAVGSGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAQAAAVQQAQAQAQAQQSHQQQQAQAQAQAQQQAQQLLHHQNMLLTSPGLPPQHAISLPAASTPSGPTGGNPTSVSTPGSNEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGHEPENTPISEYEKALQKSALASAAAGYLNNAVRSSRRKPAAPQWVNPAGASTPTAAGAVIAAGDSSGSERIINGVCIMQASDYGRDEGDSVKGGDSNADAEQDEHAHLEIEQRFMEPEVRIKQEEDDDDEQTSQQQQQQQQQLDDESAEKQLKVINEEKLRMVRVRRLSSNGDADEHCAAVQQATAAAAAAAAAAVAAAATATPAAAAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495757;
- 90% Identity
- iTF_00493543;
- 80% Identity
- iTF_00545136;