Dmer005914.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000055.1:33512006-33523027[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-07 0.0012 18.6 0.0 1 32 315 346 315 350 0.95 2 2 1.2e-18 1.9e-15 56.4 0.0 1 43 795 838 795 840 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAAGAACAATTGACGCGCAACCAATTGAATATCGCAGAGCAACAGCCCATATCAATAGTAACGAGCGAGGAGACAGAAGACAACAGCCACTGCAAGCCACTGAGCCAACGCTTGGAGCAGCCCAACGGCCAGccaatcagcagcaacaacaacaacaacaacaacaacaacggcctGTTGCAATTTGAAGGCGATTTTGACAACAACCACGACACATCACACGAGGAACGCGACTCAAGTGCAACATCACGTAGCTCCGTCTCACCGACTCCACCGCCAGAACCCAACGATTGGACACCGTTTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTTAACGCCAAAGGAGAATTGGTGGCCGAAACAgcggccagcagcaacagcaacaacaacaacacagctGTGCATCAGcacgacagcgacagcaactcGAGCGCATCGCtgcacaacagcagcacaaaTATCAGCAGCAAGCATAGAgcacgcaacaacaacaacaacaacaacaacaccagctcTATAGAACTGTACAAGCTGCTCACCCAGCAAACGGCCAATATGACATCAATGGAATCAATGGCCGCCAAGCTGGCCCAAATCACAATGATGGCCGATATCAATTTCATGAGCACGCTGGCCAATCAACAACATGCCAACTCCGTAACACCAACTACCTCGgaagtagctgctgctgccgctgccgccgccgccgctgccgccgccgctgccgctgccgcaccCAGTCCCACACTCAAGGACTCGCTGCACAGTCCACACAACGCCGACGCGCCGCTGGACCTGAGCAGCAAGCCCTCGCCGAACTCATCGATCAGCGGTGATATCAAGACAGCCAGAGCTCTGTCGGactgtgccacgccccttggCGCCTCCGGCCGGCCGGCGTACAGCAATGAGGATCTGAACAGCGCGCTGCAGGACGTGGTGGCCAACAAGCTGGGCACACGCAAGGCGCCCAGCCAATACCACGTGCCGCGCACGACGCGCAACAAACTGTGCAAAATGTCGATCGATGGCAAACGAGCGACGCCcgatctgcagcagcagcagcagcagcagcaactgttgcagctggagctggacgAGCAGGAGGAGTCCGGCGACGAGGCCGGCGATGGCGACAGCAATGCGTCGGGCTATCAGGAGCTGGCCCATCACATGGCTGTCAATGAGCACCTGCGCAAGCTGGGCGATCTCTCCGAGCACAACGGCAGCGACCTGGGCGACGAGCAGGAGTCGGCCATGTCGCCCAAGCAGACGCACTCACATGGCGGCGGCACGCCCACTGGCCACATGCCAGGCCTGGCGGCAGCTGGCGGCAATGTGGCCGGCGCTGGCCCAGCGGGCGTGACCATAGACACGCGCGTCCTGCTGCATACGCTGATGCTGGCAGCAGGCATCGGCGTCATGCCCAAGCTGGATGAGACGCAGACGTTGGGCGATTTGTTCAAGACACTGCTGATGGCCAACAGTGGCTGCATCCTGGGCCAGGAAGTCAATGGCAGTGCcacgctgctgcagcagcagcagcaacagcagcagcgtcatCTACCAAAGTCTGAAACGCCGGAGACCAGCTCCTCGCTGGATGCCAATGAGGCGTGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGCGCAACCAGCGTCTCGCCCACCAACGTCAACAATacaaacatcaacaacaacaacaacagcagcagcaacatcaacagcaacaacaacagcagcaactgcagcagcagcatcaacaacaactccagcagcaaccgcaacgGGGATCACAGTCCGCACTCCGCCTCGCCGATgctggcagcagctgttgccgttgccgccgccagcaacagctaccgcaacagcagcaacaacagcagcagcagcaacaatctgcTCTCGCCGACAGCAACATccatacagaagatgatggcCAACACCATCCAGCGCAAGATCAACGAGCAGAGCAACCAGGACACACTGCTGGGCTTAGAAAAgcgcaacaatggcaacaccAGCGGCAGCgagtgcagcagcagtggcggAGGAGGTGGCGGTGGCAGCAGAAAGCCCAGCATATCGGTGGCCAAAATGATTGGCGGCACGGATACCTCACGGTTCGGCGCGTCGCCCAACCTGCTGGCCCAGCAGCACCACAGCCACCTGAGCGCGCACCACCATGCGCACGGGCAcacgcatccgcatccgcacgcgcatcaccagcagcagcagcaacagcagcagcagcagctgagcgcGCAGGAGGCGGCAGCACTGGCAGCGGGCAAGGGCACGCGGCCGAAGCGCGGTAAGTACCGCAACTACGACAGAGACAGCCTGGTGGAGGCCGTCAAGGCGGTGCAGCGGGGCGAGATGTCGGTGCACCGCGCCGGTAGTTACTACGGCGTGCCCCACTCAACGCTTGAGTACAAGGTGAAGGAGCGGCATTTGATGCGGCCGCGCAAGCGCGAACCGAAGCCGCAACCGGATCTGGTGGGGCTGACGGGCGCGGCGAACAAGGTGAACGCCAATCTGGTGGGGCTGAATCACCTGGACAAGCTGAAGGcgggcaacagcagcggcagcggcaacagcagcagcaacaacagcaatgtcGGCTCCAAGCTTAGCAACGCCTtgaagagcaacagcagcgccgccggcgcagcagccgctgccacgcccaacgGCCTTAAGCTGCCCATCTTCGACGGCGCACCGCCGCTGTCCTTCCAGCCGACCATGTTCTGGGCGCAGCCGAATGCCGGCGGCAACTACGGCCTCGACCTGAATCGCAATAACGAATTCCTGAACAACCACCTGGCGGAGGTGATACGCGGCAGCCCGCTGGACGTCGCGGCCAACCTGAACCACGGCCACGTGCCGAGCGTGCACATGAAGAGTGCCCTGGAGTACACCCAGAACATGTACGACGGCATCATCCGCAAGAGTCTCAAGCAGAGCGACAGcgacaatggcaatggcaatggcactGGCAACGGGAACGGCACAGGCAACGGCAATGCGCTGCTGGATCAGCTGCTGGTGAAGAAGACGCCGCTGCCATTCACAAACAATCGCAACAATGACTATATCAACGCCACCTGCTCCAGATCCGAGTCGAGCGTGAAGCGTCCGGGCAGCCCGCTGGGCGCCTATGCGGATATCAAGCGCGAGCGGCTTAGTCCCATGCGCAGCACAGCGAGCGCCAGCAGTGACGAGGATCAGGATCCACATGtcaacaccaccaccaccaacaacaacaacaacagcgagctGGCccacaacaagaacaacaatggcaacggcaacggccgCAGCCGCATGACATCGCGCGACTCGGAGACCGACGCCAGCAGCCTGAAGAGCGAACAGTCGCTCAGCTCCGCAGCGCAGCTGCACAAAATGATGGATctcaatggcagcagcagcagcgtcaagTACGAGCAGGagccggcggcagcagcagcagcgcaattGTCGCCAAACAGCTCCATACTGCACGACAAGCTGGCGCAGATCAAGGCCGAGCAGGCCGAGGAGCAGTTATAG
- Protein Sequence
- MGRRKWKHYQEQLTRNQLNIAEQQPISIVTSEETEDNSHCKPLSQRLEQPNGQPISSNNNNNNNNNGLLQFEGDFDNNHDTSHEERDSSATSRSSVSPTPPPEPNDWTPFDKCNFCVNGRLLTVNAKGELVAETAASSNSNNNNTAVHQHDSDSNSSASLHNSSTNISSKHRARNNNNNNNNTSSIELYKLLTQQTANMTSMESMAAKLAQITMMADINFMSTLANQQHANSVTPTTSEVAAAAAAAAAAAAAAAAAAPSPTLKDSLHSPHNADAPLDLSSKPSPNSSISGDIKTARALSDCATPLGASGRPAYSNEDLNSALQDVVANKLGTRKAPSQYHVPRTTRNKLCKMSIDGKRATPDLQQQQQQQQLLQLELDEQEESGDEAGDGDSNASGYQELAHHMAVNEHLRKLGDLSEHNGSDLGDEQESAMSPKQTHSHGGGTPTGHMPGLAAAGGNVAGAGPAGVTIDTRVLLHTLMLAAGIGVMPKLDETQTLGDLFKTLLMANSGCILGQEVNGSATLLQQQQQQQQRHLPKSETPETSSSLDANEACEDPILKIPSFKVSGATSVSPTNVNNTNINNNNNSSSNINSNNNSSNCSSSINNNSSSNRNGDHSPHSASPMLAAAVAVAAASNSYRNSSNNSSSSNNLLSPTATSIQKMMANTIQRKINEQSNQDTLLGLEKRNNGNTSGSECSSSGGGGGGGSRKPSISVAKMIGGTDTSRFGASPNLLAQQHHSHLSAHHHAHGHTHPHPHAHHQQQQQQQQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVNANLVGLNHLDKLKAGNSSGSGNSSSNNSNVGSKLSNALKSNSSAAGAAAAATPNGLKLPIFDGAPPLSFQPTMFWAQPNAGGNYGLDLNRNNEFLNNHLAEVIRGSPLDVAANLNHGHVPSVHMKSALEYTQNMYDGIIRKSLKQSDSDNGNGNGTGNGNGTGNGNALLDQLLVKKTPLPFTNNRNNDYINATCSRSESSVKRPGSPLGAYADIKRERLSPMRSTASASSDEDQDPHVNTTTTNNNNNSELAHNKNNNGNGNGRSRMTSRDSETDASSLKSEQSLSSAAQLHKMMDLNGSSSSVKYEQEPAAAAAAQLSPNSSILHDKLAQIKAEQAEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00568172;
- 90% Identity
- iTF_00545158;
- 80% Identity
- -