Dmer013874.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- ct
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000165.1:3529565-3546505[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6e-27 5.7e-23 80.9 0.0 3 72 703 773 701 778 0.95 2 3 5.5e-32 5.6e-28 96.9 0.0 3 77 1201 1276 1199 1278 0.96 3 3 3.4e-31 3.4e-27 94.4 0.0 3 76 1471 1545 1469 1548 0.96
Sequence Information
- Coding Sequence
- ATGCGCCGTGGCTCAAATATTCATCAGCTACTGATTATTAAAGCACTTTTAGATGAGTTGCAACGCCTGCGCGCCTTGGAGCAAACTCACCTGGTACAAATCCAGAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGCTTGGAAGCTCGCTTGGATAAGCAGCAGATAAATGAGGCGCTCGCCGAGGCTACGGCATTAGCTGCCGCTGTTAATGCTGCTgcgacaaacaacaacaacaacaataacaacaatagcaacagcaacaacaacaacagcagcagcaacaacaacaacaacaatcacagtAGCcagagcagcgacaacaacaatgtcgTATTCAAGACAACTGATCTAACATCGACCCATCGGCACaacgacgatgatgacgatgacgatgacaacGATCACGATAATGAGCTGCGCGACGCCGatggcgatgatgatgatgacctGCACATGAGCaacagcgagcagcagcagcagcagcagcaacactcaGCTCTAGTCAACAATCGCCACGACGATGAGCCGGACAAGGACGATGCCGAGGACCACGATACAGAAATGTCGaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGACTTGAATGTGCTCAGTCCACAGTCGGCCATCGCCACAGCCGCCGCGgccgccgcagccgctgcctgTGCCAACGATCCCAACAAATTCCAGGCCCTGCTACTGGAGCGGACCAAAGCACTGGCCGCCGAGGCGCTCAAGAACGGCAGCAGCGATGCCGTTAGCGATGAAatgccgcaacaacaacaagccgTAGAcgtagcaacaacagctgtagaagaagatgcagcagcagcagcagcagcagcagcagcaacagtaagcgccgcagcaacagttgccaagCCAGATTTGAATAGAGTTGGAACGAATGAGAATGAGACATTGGCCGAGGCCAATTTGCAGCCGAAAATCGAAATCTTAGACACAGACGAGgctccagctgctccagccCAGACGCTCGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGTGGCTTCGAAACGAgcaccacagcagcagctgcagcagcaacagcagcagcaactgcagctccagcaacagctgccgctgcaacTGGGAGCAAAACGCCAACAATTTATCAAAATGCCAATGTggtgcagcagcaattgctgccaccaccgccaccgccacagcagccgcagcaacaacaacaacaacagcaacaacaacaacaacagcaacactatcaacaacaacaacaacaacagcaacagcaacagcaacaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCGCACGCCTAGATGCCGCCACACACcaccagctccagcagcagcagcagcagcaacagtctcagccacagcagcagcaactgctgcacaatagcagcaatagcagcaacagcagcatcgcCGGCAGCGATCCACTGAATCATCACCATCACGCCCACCACCATGGCCATGGGCATGGCCAACTGTTGCATACGGCTCACCATTTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAACAGCACACCGAACAGCACAGCCCAGCTGGCGGCGAGCATTGCTAGCACGCTGAACGGCAACAAGTCCCTGCTGCAGGCAGCGGCCGCTGCGAATGTGGCTGCGgccgccgttgccgttgccgaggacaacaacaacagtctgACGCCCAATGCGAACGCGGCTGTGGCCGCCGCAGCTATGGCTGCCCATGCCCAGCATGCCGCCGCCCTGGGCGCTCCCAGTTTCCTGCCCAATCTGCCCAGCCTGCCATTCCAGtttgcagctgccgcagccgccGGGCAGGAGGCGCGTGCGCATTTTCGGTTCGCGGACGCcgagctccagctgcagccagGTGTTTCCATGGCGGGTCGTTTGGGTGAATCACTGATACCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCAAATCAGGCGCTCGACACGCTGCACATCTCGCGACGCGTACGGGAGCTGCTCTCCGTGCACAACATCGGGCAGCGTCTGTTCGCCAAATACATATTGGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTAAGCAAGCCGAAGCCCTGGGATAAGCTGACAGAGAAGGGTCGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGCGATGATAATGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGatTCTGGACTGCCTCAGTATGCTGGTCGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATCGCCTCGCACACATACTCAGCGAAGCCTCCTCCCTGATGAAGAGCAACGTGGTCgccgcccagcagcagcagcagcagcaggagcatcaGCGTCGTCATGCCAGCGACGATACACACAGCAACGATGACAGCAAATCGCCGCCGCAGAGCTGCAGCTCACCTTTCTACAAGGTGGAGCACCAgatcaagcagcagcagcagcagcagcaacagcagcaacagcagcagcagcagcagctgcacgtCTCCGACCATGCGCAGCGGGAGCAGCGCGaggcagctgccgccgccgccgccgttgccgtccaccagcagcagcagcagcgcgagcAGCGCGAACAGCGCGAGGCCGTTCagcgcgagcagcagcagcggctgcgtCACGAGGATCTCGCCCAGGACAAGATGGCGCGTCTTTATCAGGAGCTAATGGCGCGTACACCGCGTGAAGCAGCCTTTCCCAGCTTTTTGCTGTCGCCCTTCTTTAGCGGCGCCGCTGGCATGCCCGGAGCAGCCGCCAATCCATTCCCCGCCGCCATGGCCGCCGACGAGAACATGCGTCATGCGTTCGAGCGCGAGATCgtgaagctgcagcagcagcagcagcaacaacagcagcaggcgcaggcgcaggCCGCCAGCTTTCCGAACTTTTCCAGCCTGAtggcactgcagcagcaggtgctGAACGGCGCCCAGGATCTGTCGCTGGCCGGCAAGGAGATCAAGCTGAACGGGCAGCGTTCGTCGCACGATCAgcacagcggcagcagcagctccaaggATGGCGAGCGCGGCGACGATGGCGATCGCAGCTTTCCCGCCCTGCCGCACGCCCGCAAATCGGATGGCGGCAACACGCCCGCTCCGCCCGCACCGCCCGTGGTCAATGCcgccggcagcggcagcaacccGATAGCGGGCaacgtcgccgttgccgtcgccgtcggcaGCGGCCATGGCAGCAACTCAGCTGCGCCCAGTCCATTGAGCAACTCAATCCTGCCACCGGCTCTAAGCAGCCAGGGCGAGGAGTTTGCGGCGACAGCGAGTCCGCTGCAGCGCATGGCCTCCATCACCAATTCGCTGATTACACAGCCGCCCGTGACACCGCACCACTCGCAGCCGCAGCGACCCACCAAGGCGGTGCTGCCGCCCATCACGCAGCAGCAGTTCGACATGTTCAACAACCTGAACACGGAGGACATAGTGCGACGCGTCAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTCTGTTCGGCGAGTCCGTGCTGGGCCTGTCGCAGGGCTCCGTCTCCGATCTGCTCGCCCGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCCGCGAGCCCTTCATCCGCATGAAGATGTTTCTGGAGGACGAGAACGCGGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGCCCACAGATGCCGCAGGGCCTGGCCAACAAGATGCAGGCTACGCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGCCCAGGCGCAGCACATCATGCAGCAGATGCAGGCGGCGGCCGCCATGTCCGCggccatgcagcagcagcaggcagcggccGCCCAGGCGGCAGCCGTGCAGCAGGCCCaagcccaggcccaggcccagcagagccaccaacagcagcaggcccaggcccaggcccaggcccagcagcaggcccagcagctgctccatCATCAGAACATGCTGCTGACGTCGCCCGGTCTGCCGCCCCAGCACGCAATCAGCTTGCCGGCGGCGAGCACGCCCAGCGGCCCGGCCGGCGGTAATCCCACATCCGTCTCCACGCCCGGCAGCAACGAGAAGAAGCCCATGATGATGCCCGTGCACGGCGGAGCGCATGCGCCCAATGCCATGCGCAGCCTGCACCAGCACATGTCGCCGACCGTCTATGAGATGGCCGCGCTGACCCAGGATCTGGACACGCACGACATAACCACCAAGATCAAGGAGGCACTGCTCGCCAACAACATCGGCCAGAAGATCTTTGGCGAGGCGGTGCTAGGCCTCTCGCAGGGCTCCGTCTCGGAGCTGCTGAGCAAGCCCAAGCCCTGGCACATGCTCTCCATCAAGGGGCGCGAACCCTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAACGTtgagcggctgcagctgctcaagAACGAGCGGCGGGAAGCGAGCAAGCGCCGCCGCAGCACTGGACCCAACCAGCaggacaacagcagcgacacgTCCAGCAATGATACGAACGATTTCTATACGAGCAGCCCGGGTCCCGGCTCGGTGGGTTCCTCGGTGGGCGGGGCACCGCCTAGCAAGAAGCAGCGTGTGCTCTTCTCTGAAGAGCAAAAGGAGGCACTGCGTCTGGCCTTCGCCCTCGATCCCTATCCAAATGTCGGCACTATCGAGTTTCTGGCCAACGAGCTGAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTGCCACACGGCCAGCCCGGCCAGGACAATCCCATACCCAGTCGCGAGAACACCAATGCCACGCCCTTCGATCCCGTCCAGTTCCGCAtcttgctgcagcagcggctcgTCGAGCTGCACAAGGAGCGCATGGGCCTGAGCGGTGCGCCCATACCCTACCCACCGTACTTTGCCGCCGCCGCTCTGCTCGGCCGCAGCTTGGCGGGCATTCCGGGCGCCGCGGCGGCTgccggcgcagcagcagctgcggccgcTGCCGTCGGCGCCGCCGGCGGCGATGAGCTGCAGGCGCTCAATCAGGCCTTCAAGGAGCAGATGAGCGGCCTGGATCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGATGACTATCAGgacgagctggagctggacgCCAGCGGCCACAACATGAGCGACAACGAGTCCATCGAGGGCGGCCACGAGCCCGAGAACACGCCCATATCCGAGTACGAGAAGGCGCTGCAGAAGTCAGCGCTGGCCTCGGCCGCCGCTGGCTACTTGAACAATGCGGTGCGCAGTTCGCGCCGCAAGCCCGCCGCCCCACAGTGGGTGAATCCAGCTGGCGCCAGCACGCCGACAGCGGCAGGCGCTGTCATCGCAGCcggcgacagcagcggcagcgagcGCATCATCAACGGCGTTTGCATCATGCAGGCCTCGGACTATGGGCGCGACGAGGGCGACAGCGTCAAGGGCGGCGACTCGAATGCCGATGCTGAGCAGGATGAGCATGCGCATCTGGAGATCGAGCAGCGCTTCATGGAGCCGGAGGTGCGCATCAAGCAGgaggaggacgacgacgatgagcagacctcgcagcagcagcagcaacagcaacagcagctggacGATGAGAGCGCCGAGAAGCAGCTGAAGGTGATCAACGAGGAGAAGCTGCGCATGGTGCGCGTGCGACGGCTGAGCAGCAACGGCGACGCCGACGAGCACTGCGCCGCAGTGCAGCaggcgacggcagcggcagcggcggcagcagcagcggccgttgcggcagcagcaactgcgacgccagcagcggcggcagcagcgtgGAACTACTAA
- Protein Sequence
- MRRGSNIHQLLIIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNNSNSNNNNSSSNNNNNNHSSQSSDNNNVVFKTTDLTSTHRHNDDDDDDDDNDHDNELRDADGDDDDDLHMSNSEQQQQQQQHSALVNNRHDDEPDKDDAEDHDTEMSNATATADSNELKIKKEQHSPLDLNVLSPQSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGSSDAVSDEMPQQQQAVDVATTAVEEDAAAAAAAAAATVSAAATVAKPDLNRVGTNENETLAEANLQPKIEILDTDEAPAAPAQTLEEQLVNSYWRRGFETSTTAAAAAATAAATAAPATAAAATGSKTPTIYQNANVVQQQLLPPPPPPQQPQQQQQQQQQQQQQQHYQQQQQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSARLDAATHHQLQQQQQQQQSQPQQQQLLHNSSNSSNSSIAGSDPLNHHHHAHHHGHGHGQLLHTAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSNVVAAQQQQQQQEHQRRHASDDTHSNDDSKSPPQSCSSPFYKVEHQIKQQQQQQQQQQQQQQQQLHVSDHAQREQREAAAAAAAVAVHQQQQQREQREQREAVQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLLSPFFSGAAGMPGAAANPFPAAMAADENMRHAFEREIVKLQQQQQQQQQQAQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKEIKLNGQRSSHDQHSGSSSSKDGERGDDGDRSFPALPHARKSDGGNTPAPPAPPVVNAAGSGSNPIAGNVAVAVAVGSGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAQAAAVQQAQAQAQAQQSHQQQQAQAQAQAQQQAQQLLHHQNMLLTSPGLPPQHAISLPAASTPSGPAGGNPTSVSTPGSNEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGHEPENTPISEYEKALQKSALASAAAGYLNNAVRSSRRKPAAPQWVNPAGASTPTAAGAVIAAGDSSGSERIINGVCIMQASDYGRDEGDSVKGGDSNADAEQDEHAHLEIEQRFMEPEVRIKQEEDDDDEQTSQQQQQQQQQLDDESAEKQLKVINEEKLRMVRVRRLSSNGDADEHCAAVQQATAAAAAAAAAAVAAAATATPAAAAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495757;
- 90% Identity
- iTF_00476522;
- 80% Identity
- iTF_00544382;