Basic Information

Gene Symbol
NCOR1
Assembly
GCA_035042045.1
Location
JAWNLY010000181.1:1068129-1073893[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-07 0.0001 22.3 0.0 3 43 898 938 897 940 0.97

Sequence Information

Coding Sequence
ATGGATCAGCAGCAGTATGTCAAAAGTCTTGGACATCTGCAGactcatcagcaacagcaacatcagcaacagcaacagcaacaacagcaacacgagcaacaacaacggcaacagcaacaaatgcatcaccatcaccatcatcagcagcaacagcagcagcaacaacaacaacaacagcagcagcaacaacaacaacaacagcagcagcaacagcagcagcagcagcaatcgtcTCGCTCGGCAGCAAGTCCGTTGTCGCCGCCACGTCCTGCACCGGGCagcgcagcggcagcagcggcagcgaatAACTATGCAAAATTTGCGGATGCGCCGCAGCATTTTATACAGCCAGCCGCATACAGCATCGGAATCCCACCGGTGGCCAACTATCGGGAGAACCATTATATGCGGATACCGCCCCAGTTGCAGGCAACGGTGCCGGAATTTCAGCGGGCGGCTCGTGCTGCATCTGtggctgccgttgctgctgctgccggtggtgcggccgctgctgctgcagctgttgttgctggtggtcCACCGACaactgcggcggctgctgctgctgccgcggCGGCGGCCTCTGTCCAGGTGCCACCAGGCAGCATGCCACCCCCAGGCGCCCAATCTGGCGGTGTCCTCGTCATGGACGCCATGTCGCACTATCAATCGCTGCAGTATAACAACGAATACCTGACCAATgccgcagctgttgcagcagtcaatcagcgccagcagcaccagcaacatcagcagcaacagcagcaacagcagcaacaacagcagcagcagcaacagcagcagcatcaacaggcGCTGTCGGAGCCGCCGGGCAGCGTAGGTCAACCTTATAAGAAGCAACGGTTGAGCGACGCCAATGTCAGCAACATAAATCACCTGccacaacaccagcaacagcagcagcgctctTCACccgctcagcagcagcagcagcagcagcagcaacataacaGTCGACAGAGCAATCATGGCCCTGTGTTGCACATGTCcgctgcggcagcagctgcctctgTTCTGACACCGCTGGCTATGCAGCAGCTCAAAGTGGAAtcgctgccacagcagcagcaacaacaacaacaacaacaacagcagcagcagcaacaacaacatcagcaacagcaacaccaccaacagcagcaacaacaccaccaacagcagcagcaacaacaccaccaacagcaacagcagcagcagcaacaacaccaccagcagcagcaactgcagcagcagcaacaccaccaGCAACTGACGTCACAGGCGCATGCACCACGTGGTCTGGTGGCACCACCAACGATGTCCACAGCCACTGGCAGCATTGGTTGTGGCCCAGCGCAACATATTGGCTCGGTGAGCGTCTCCTCGGcggccagcagcaacagcagcggcagcattgCACATGCTGCACCCGAAGCATACCATCCACAGGTGGAGGCCATTTCCCCAACGCTGCCCAGCGACAATGCGGATGAGCGTGgacggagcagcagcagccacagccacagccacagcaacatcaacaataatacAAGCAGCAATAttgctggcagcagcaacaacaacaaaaactgcagcagcaacaataacagcagcagcagcaacagttgcagcagcaacagcaacagcagcaacaacaacaacaacatcaacaacaacagcgccaaGGAAGAGTTGCTCATGCAAATCCAGCGTGTGGACAATGATATCAAAAGTGCCGAGACGGCAATGGATACGCTGCGTAAAAAGGAGAAATCTTTGATGGACGAAGTGGCAGCGTCGGCGGCAACTGctaaacagcaaaagcaacaccagcagcagcagcagcaacaacaacagcagcagcaacatcagcagcagcagcagcagccgcagctggCAATGTcagcgtcaacgtcaacgtctgCGCCGGCGGCAAGTGGTGGCACTGAGATTATGGAACTGGCGTGGCGGACACGAATCCTGGCGCAGAACATCTACAAGGCGAACCGTAAAACGGCAGCCGAGCAACATTCCCTGGTGAGTGCCGCACTGGGCGTTCCCAGcagcaatgacaacaacaatggaagCGTCGTTGAAGTTGAAGATGATGGCGAAGGCGAAGGCGAAGGCGATTGCATCGTCAGCACTGATGGGGATGAGGTGAGAGAAAGACCACGTCCCTGGCTGCCGTTGTATAACCAACCGTTAGATGTGGATGCACTGACGCATCTGATAAAGCGACACCAGACACTGGTGCGGAATCCGCTGTTGGAGCACATACGCAAACTGAAAGCGGAACGGTGGGAGCACAATCAGGGTCTGGTCGATAAGTATACCAAGGATCAGGCGGATTGGCAGCGACGCTGCGAACGGGCGGAGGCCAGTGCCAAGCGGAAGGCGCGCGAGGCAAAGAATCGCGAATTCTTTGAGAAGGTGTTCACCGAGCTGCGGAAACAGCGGGAGGACAAGGAGCGCTTCAATCGGGTCGGTTCGCGCATCAAATCCGAGGCGGATCTCGAGGAGATCATGGACGGGCTGCAGGAGCAGGCGCTCGAGGATAAAAAGATGCGCTCCTATGCCGTCATCCCGCCATTGATGCACGATGCCCGCCAGCGTCGCTGCGCCTATCACAACGAGAATGGTCGCATTTTGGATATGGTCGCGTTGCACGAACAGCGGAAGGCCATCAACATGTGGACGGCCGGCGAGAAGGAGATCTTCAAGGAGAAGTATTTGCAGCATCCAAAGAATTTTGGTGCTATCGCCGCCAGTTTGGATCGCAAGTCGCCGCAGGACTGCGTCCGCTACTACTACCTCAGCAAGAAGACGGAGAACTACAAGCAGCTGTTGCGCAAATCCCGCCAACGGACGCGCAGCAGTCGCCATCCGGCCAaggcccaacagcagcagccccagTGCATCATCGATTCCCTGACGACGGGCGTCACGACGCGCCTGCaacgggagcagcagcaaaagtccGGCAATCGCTCCATTGCCGAGCGGGAGCGGGCCGAGCGTGTCGCGGAAAGGGAGCGCGTTGCCGAGCGGGCAGCGGCGGATGCCGCCAAAGCGGCTGAATCTGCCGCGGAAAAGGCCAGCGCTGTTAGCAAAGCAGCCGAAGAGGCGGCAGCCGGCACTGAGAAGGTGGCCAAAagtgtggcagctgcaacagcggcatcagcagcagcagcggcaacagcaaccgcagctAGCGATAAGGCGGACaagcatgcaacagcagcagcagcaacagcagcagcagcagcaacagcaacagcagcagcagcgacagagATCTCAACGGGCAGCAGCGATACCAAAGCGAAAACCGCTGAGGatgatgcaacagcaacagcagcaaccacaacaatagcaacaactgcaagaGCAGCTGCCAAagctgcagcaaaagcaaaagcagcagcagcagcagcagcagcgacaacaacagcagcaacaacaacagcagcagcagcagcagcaacctcAGTTAAAGCAGCAgtagcggcagcggcagcaacaacaacatgtagaacagtggcaacagcagcggcaacaacaacagcagctgctgcaacaaaaacaccaacaacagcaacaacagcaacaacaacagcagcaacagcagtatcAACAGCAATCAGTGAGGCAGCTGCAGCGACAACACCAAAGGCGTCCAAGtcgcaattgcaactgcaacagcaacagcagcccgATGGAAGCACAGCTGTGGACAAGGCAAAggcagccaaagcagcagcggAGGCAAcaccggaaacggaaacggagCAGCTTGGCAAGCAAGGCAAAGCAAAGGCCTCCAATGCGGAAGGCTATAACGCCACTGGTGGTGTctcagcgacaacaacagcagcagcagcagcaacaacatcggcATCGGCAGGTGCCACGCCCAGAGCAGTGCCCACCGTTAGTGTGGCTATCAATGGCTTTAAGCCCGGCTATCAGAGCGTTGTTATGGCCAATGTCAAAGTGTCTGCAGCTGGTGGAAACATTGATGATGCCACAAcgataacagcagcagcagcagcagcaacagcgtcgACAAATGCAACTAGCGATAAAATCGTGAAGACGACGCcgacaacagttgctgctgcggcaggtTTTGCGGTACCAAATGCGGCCAGTCAACGGGCGGAGCCTGTTAGCAGTGTGGCAACGctgacaacggcaacaacagctggcAACTATTTGGGGCAAAAGTTGAAGGCGGCGCAGGTGGAGGGACTTGGCGCCGGCAACGAGCTGCACACGGATGTTAGTGATGCCAAGAAGAAACGCTTCGAGCTTTCGCCTGGCGATGTCAGCAACAATGctctcagcaacaacaacaacaacaacaacaatagcaacagcaacagcaacaacaacagcagcagcagcaatttaaacGCCAACAGCTCCAAACTGAATATCAAGGATGCAACCAATCAAGTGACGTGCATTGGCAAAAGCAACACGGGATCTGGTACAGCTTTGGTGGCGGCCGCCTCATCCTCAAACTCATCGCTGCAGTTTATTGGCTCCGCGTCGATTATGGCCACAACGGCAGCGGGACAACAACAGCGGACAACGGATCGTGCTGGCAATTTGTTGAGCAACTCTGACGTTCTGGCATTGGACGGCAAAGAGAATATTTGA
Protein Sequence
MDQQQYVKSLGHLQTHQQQQHQQQQQQQQQHEQQQRQQQQMHHHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSRSAASPLSPPRPAPGSAAAAAAANNYAKFADAPQHFIQPAAYSIGIPPVANYRENHYMRIPPQLQATVPEFQRAARAASVAAVAAAAGGAAAAAAAVVAGGPPTTAAAAAAAAAAASVQVPPGSMPPPGAQSGGVLVMDAMSHYQSLQYNNEYLTNAAAVAAVNQRQQHQQHQQQQQQQQQQQQQQQQQQHQQALSEPPGSVGQPYKKQRLSDANVSNINHLPQHQQQQQRSSPAQQQQQQQQQHNSRQSNHGPVLHMSAAAAAASVLTPLAMQQLKVESLPQQQQQQQQQQQQQQQQQHQQQQHHQQQQQHHQQQQQQHHQQQQQQQQQHHQQQQLQQQQHHQQLTSQAHAPRGLVAPPTMSTATGSIGCGPAQHIGSVSVSSAASSNSSGSIAHAAPEAYHPQVEAISPTLPSDNADERGRSSSSHSHSHSNINNNTSSNIAGSSNNNKNCSSNNNSSSSNSCSSNSNSSNNNNNINNNSAKEELLMQIQRVDNDIKSAETAMDTLRKKEKSLMDEVAASAATAKQQKQHQQQQQQQQQQQQHQQQQQQPQLAMSASTSTSAPAASGGTEIMELAWRTRILAQNIYKANRKTAAEQHSLVSAALGVPSSNDNNNGSVVEVEDDGEGEGEGDCIVSTDGDEVRERPRPWLPLYNQPLDVDALTHLIKRHQTLVRNPLLEHIRKLKAERWEHNQGLVDKYTKDQADWQRRCERAEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDARQRRCAYHNENGRILDMVALHEQRKAINMWTAGEKEIFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRHPAKAQQQQPQCIIDSLTTGVTTRLQREQQQKSGNRSIAERERAERVAERERVAERAAADAAKAAESAAEKASAVSKAAEEAAAGTEKVAKSVAAATAASAAAAATATAASDKADKHATAAAATAAAAATATAAAATEISTGSSDTKAKTAEDDATATAATTTIATTARAAAKAAAKAKAAAAAAAATTTAATTTAAAAAATSVKAAVAAAAATTTCRTVATAAATTTAAAATKTPTTATTATTTAATAVSTAISEAAAATTPKASKSQLQLQQQQQPDGSTAVDKAKAAKAAAEATPETETEQLGKQGKAKASNAEGYNATGGVSATTTAAAAATTSASAGATPRAVPTVSVAINGFKPGYQSVVMANVKVSAAGGNIDDATTITAAAAAATASTNATSDKIVKTTPTTVAAAAGFAVPNAASQRAEPVSSVATLTTATTAGNYLGQKLKAAQVEGLGAGNELHTDVSDAKKKRFELSPGDVSNNALSNNNNNNNNSNSNSNNNSSSSNLNANSSKLNIKDATNQVTCIGKSNTGSGTALVAAASSSNSSLQFIGSASIMATTAAGQQQRTTDRAGNLLSNSDVLALDGKENI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00535251;
90% Identity
iTF_00511214;
80% Identity
-