Basic Information

Gene Symbol
Ubp1
Assembly
GCA_035042045.1
Location
JAWNLY010000205.1:1659942-1671527[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.16 1.3e+03 -1.7 2.2 98 130 29 61 19 81 0.60
2 3 3.5e-53 3e-49 167.2 0.5 16 190 415 586 398 595 0.86
3 3 3.7e-13 3.1e-09 36.4 0.8 188 221 643 676 633 678 0.89

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTTTATCGCAAAGTTCGGGCCTTTTGGATATAAAAAGCTTATTTGATCCACAATATtcattacaacaacaacatcaacaagaaaatcaacaaaatcagcaacatcaacaacaacagcagctttaTTTGCCAtcacaacaatatcaacaacaacaacaacaacaacaacaacattatcaAATATCACACATATCAACGAAATTTGATTTGAGCATTTTCAACGATTTCGAccaaatggaatttaataacaatttgagTCGAAACCAAAATCAGTACcagaataacaataataataataataataacaataacgataacgataataACAGTAGCatcaacaatattaacaaccacaataacaacaacggaGAACATTTAAATCAGGTTCAAAATCGTCATTTCATGAGCGGctatcatcatcagcatatTGGATCGGACTATGAGCAAGTGATTAACTTTGTTGACTCACCACCGACCTCTGAGGAATCTTGGACAGACGCACAGTGCAAGGATTCACCAGGACCGCATATTATTGACGTACGGACAATTTACTCGGAGAGTGTTTCACGCAAAAGACGAATGGATTGGGACTCATTGGATATTGGCCAAAGTGAAAATTCGCCGACAACCCAATCGGGCGACATACCCAATAAGGTGGCACATCTGGAGAAAGATAAACACAAACGTGAAAAGCATTCAGGTCGCAGCAGTTGGAGCGACGATATTGGGTTCGATCTGAACGCCGATTTTAATAGCAACTCATATTTGAACAATGAAAACTTTTTGGCCTTCTCACCGGGCATAACGGCACTAAAACAGGAGCCGCAAACGGAGCAGCTGAAACCGACTACAAAGCTACCATTGGACAGCAGCGCTGCGGGGGCAGTGCACAATATTGGGAAGATCGACAAATCGCCATTGGGCGACGCCAATCATTCACCACAGCGTCCGGCGCAATCCCAGGAAGTGGTTGGCTCTGGATCAGGATCAGGAACAGGTACAGCTggtggcaacagtggcagcgaAAGCGGTGGCAAACATGAGTTGAACTCCGGTATCATATGCGGCTGTGGCTCACCCCAAGGCTCGCCAGCCTCAACGGAATTTGAACTGAATGCAGCTGCAACGGACAAAACCATAGCTGCATCTGGCAATGAGGGTTATGCCCTGGCGCCACGCTctgagctgcagcagcagcaggtgagCGCTGTTGAAGCGGCCAAGATTGAGCCAAGCTCATCCACTGGTGCATCACATGCCGAGGATCACAAATTTCAGTACATTTTGGCAGCGGCCACCTCAATTGCTACAAAGAACAACGAGGAAACTTTGACTTATCTGAATCAGGGCCAAAGCTATGAGatcaaattgaagaaaattggTGATCTATCATTCTACCGCGATAAGATTTTGAAGagcgTTATCAAAATCTGTTTTCATGAGCGACGATTGCAGTTTATGGAACGCGAACAGATGCAACAATGGCAAGCATCGCGGCCGGGTGATCGCATCATTGAGGTGGATGTGCCATTATCGTATGGTTTGTGCCACGTGTCGCAGCCATTGAATTCGAGTGCATCGAACACGGTGGAGATCTTTTGGGATCCATTTAAAGAGGTCGGCGTCTACGTCAAGGTCAATTGCATTTCAACAGAGTTCACGCCCAAGAAGCACGGTGGTGAAAAGGGTGTCCCATTCCGGCTACAAATTGAAACCTATATTGAAAATTCGCCAGCaaatagcagcaacattaacagcagcagcagcagcaacagcaacagcaacagcagcagcagcagcggttccagtgccaacaacaacaacacgagcAATACGACAaccagtaacaacaacaacaacaacaacaacacatcaTCAGGGGGCACATTGGACAATCGTGCCGCACTCAATGGCAAACAGGCGGTGCATGCAGCTGCTTGTCAGGTTAAGGTCTTCAAGCTAAAAGGCGCCGATCGCAAGCACAAGCAGGATCGTGAAAAAATTCAGAAGCGTCCAACATCTGAGCAGGATAAATTCCAGCCCAGCTACGAATGCACCATAATGAATGATATATCATTGGACCTGATAACACCAACCATCACAACCGGTTGCTACAGTCCCGAATATATGAAACTGTGGCCGAATTCGCCGGTGCATGTACCAAAATACGATGGAATGCTTCCATTTGCAAGCAGCGCATCTCCAGCGGCCAGCAGCAGTCCCATTGCGATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAATTAATGGATGCCACAAATATGGTGTCGCCGCCGCATGTCCCAGCCGATATGGAAGACTATAATCAGAACATAATGCCGGATTCAACACCGGCACAAGTGACACAATGGCTGACCAATAATCGTCTGACATCGTACATCGCCACATTTACACATTTCTCGGGCGCGGACATTATGCGCATGTCCAAGGAGGATCTTATTCAAATCTGTGGACTCGCAGATGGCATACGCATGTTCAATATATTACGTGCCAAAACGATTGCTCCTCGGCTGACTCTTTATGCGAGCATGGATGGCTACAGCTATAATGCGATCTATTTGCTGTCAAACACGGCCAAGGAGTTGCAGCAGAAGCTGTACAAGTTGCCAGGCTTTTACGAGTTCATCGCGAAGGGCGGCTCTGGTGGCACTTTGGAGAATGGCAGTGCTGCAGCTACAGCCGCTGCAGCGCTCTACAACAATTGGGGCATGCATTCAAAATACTCTGGCAGCGGCTCGAACATATTCAATGAGGTTAACAAGAGTTGCGTGTATATATCGGGTCCGTCGGGCATTCTTGTCTGCGTCACCGACGAGGTGCTCAACAATGAGATCAAGGATGGCAGTCTATATTCTCTGGATGTGCAGGGCGGCAAAGTTGTCCTGAAATTGATCAATAAGCAGGATAACAATTAA
Protein Sequence
MALSFLSQSSGLLDIKSLFDPQYSLQQQHQQENQQNQQHQQQQQLYLPSQQYQQQQQQQQQHYQISHISTKFDLSIFNDFDQMEFNNNLSRNQNQYQNNNNNNNNNNNDNDNNSSINNINNHNNNNGEHLNQVQNRHFMSGYHHQHIGSDYEQVINFVDSPPTSEESWTDAQCKDSPGPHIIDVRTIYSESVSRKRRMDWDSLDIGQSENSPTTQSGDIPNKVAHLEKDKHKREKHSGRSSWSDDIGFDLNADFNSNSYLNNENFLAFSPGITALKQEPQTEQLKPTTKLPLDSSAAGAVHNIGKIDKSPLGDANHSPQRPAQSQEVVGSGSGSGTGTAGGNSGSESGGKHELNSGIICGCGSPQGSPASTEFELNAAATDKTIAASGNEGYALAPRSELQQQQVSAVEAAKIEPSSSTGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLNSSASNTVEIFWDPFKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIENSPANSSNINSSSSSNSNSNSSSSSGSSANNNNTSNTTTSNNNNNNNNTSSGGTLDNRAALNGKQAVHAAACQVKVFKLKGADRKHKQDREKIQKRPTSEQDKFQPSYECTIMNDISLDLITPTITTGCYSPEYMKLWPNSPVHVPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPPHVPADMEDYNQNIMPDSTPAQVTQWLTNNRLTSYIATFTHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASMDGYSYNAIYLLSNTAKELQQKLYKLPGFYEFIAKGGSGGTLENGSAAATAAAALYNNWGMHSKYSGSGSNIFNEVNKSCVYISGPSGILVCVTDEVLNNEIKDGSLYSLDVQGGKVVLKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00497147;
90% Identity
iTF_00576108;
80% Identity
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