Basic Information

Gene Symbol
grh
Assembly
GCA_035042045.1
Location
JAWNLY010000185.1:2067664-2098596[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7 1.4e+04 -5.1 6.8 84 111 256 283 209 302 0.52
2 3 1.1 9e+03 -4.4 3.1 10 17 561 568 534 587 0.48
3 3 2.7e-63 2.3e-59 200.3 0.5 24 221 701 893 687 895 0.94

Sequence Information

Coding Sequence
ATGATGCAGGATGCAACCAGCAGCTATGCCATCTCCTACACGGACTGGATAGCTGAGTCACGGCGCTATAGCTTGGAGGCTGCACAGCATGCAACGCCGCCCCCGCCATCAGCAacaccacagcaacagcagcagcagccgcaacagcagcagcagcagcatcagcaacttcatcatcagcaacagcagcatccacatccacatccgcaaCCACATCATCAGCTTCAAGCACACCATCttaatcatcatcagcaacatcatcagcattatGCGAGTCAATCGCCACCGCATTACTCATATGTGGTGCCGCCCAAGGATGCAGCAGctcagttgcaactgcagctgccgctgacCGCCGCTGGGCTCATGCAATCGGTGGCCGATGAGATTCAACTAAACGAACAGCAATCGACACAGCCGCCAGCAGCACCGCCcccaccaccgccaccgccgccgccgctgccgctgccgctgccgccaacAGCACACGCCTCCAACTCCAGTTATGCGGTCTACAGCTACTATCGAAATGGCGATGTGGATGTCGATGTGGAtgtcgagcagcagcagcagcatcagcagcaacacaatTCTAGATCACAACAAGATCAGCAGCTACTGTGGAGCAATGCGAGCAGCACCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTTTGCTTGGCTCACACCCCTCATCGTCGGCCGCCACAACCGGCGTTGTgtccacaacaacaatctcaaatcagcaacatcagcagcaacagcaacaacaacagcaacagcaacatcagcagcaacagcagcatcaacaacagcagcagcagcagcaacaacaacaaccgccaCATCCCAGCGACATTGTGACCATAACCACGGCGGGAGTGGGGAGTGCGGGCTCAATTGTCTCCGCCGCagtacaacagcagcaacagcagcagcagcaacaattgctgagCATCAAACGTGAACCCGAAGACTTGAGCAAGGATCCCAAGAATGGCAATCTGGGTGCCGCAGCAAACGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAACTGAAGCtgaggcaactgcaacttcaactgcaactgcaactgcaactgcattcGAAATTAGCGAtaaaacagctgctgcagcaacaacaacaacaacaacaacaagtgaaaCTGCAACTAGTCCCGCCAGCGCCACAACAGATCTCGAGATGTATGCTTCAACGGGCGCCACACAGCTTTATCTACAGACCTCACATCAGAACAGCACCGGCCCCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCCGGGCCGTACATCACAACGGATAGCTATGGCATGTATACGGCCACAAGATTGCCACCAGGCCCACCGCCCGCCACCACATTCATAACGGAACCCTATTACCGGGAATACTTTGCGTCCGATGGCCAGGGTGGCTATGTGCCCGCCGGCACAGCACGCAGTCTCTACGGCGAGGATGTATCCGTGGCAGCGGCCACACAACCACAGCCCGTGGGCGGTGTTTACGAGGCGCGATTCACCAGCAATGGCCCAACCACAACCACAGTGCTAACCAGCAGCAATGCACACCACCacagtcaacagcagcagcagcaacagcaacaacagcaacagcagcagcaacaacaacagcaacagcaaccgcagcatcagcagcaggaacaaTCGGTCAAAAGCGGCGGTACTCCACTATATGCTAAGGCTATAACCGCGGCGGGTCTTACCGTCGATTTGCCAAGTCCCGATTCGGGCATTGGCACGGATGCAATTACGCCGCGGGATCAAAATCACATACAGCagTCCTTCGACTACACGGAACTTTGTCAGCCGGGCACCTTAATTGATGCGAATGGCAGCATACCCGTTTCGGTCAACAGCATCCAGCAGCGCACCGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGACACAAGCACAAATGGCTCGACACGCTCGAGGCCCTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGTTATAATTTGGAGAGCCCCATCAGCTCGTCACAGCGTCGGGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAATATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATCGCAGTTCAGTGCCTCAGCACGGATTTCAGCAGTCAAAAGGGTGTCAAAGGTCTGCCGTTGCACGTGCAAATCGATACGTTTGAGGATCCGCGGGATGCAACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCGGAGCGTAAGACGCGCGACGAGGAGCGTCGCGCCGCCAAGCGCAAAATGACAGCCACTGGACGCAAGAAGCTGGATGAGCTCTATCATCCGGTCACAGATCGCTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTACTCTTCTCGCCCGCCGAGGATATGGAAAAGAGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAAGGTGCCTCGCCGTTCTTGTTGCACGGTCAGAAGGTGGCCACGCCCACGCTCAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAGAAGGATCATATATTGGATCAGAATATGTTAACCAATACGCCCATGTCCGATTTTGGGCCACCAATGAAGCGGGGCAGAATGACGCCGCCGACAACGGAGCGTGTCATGTTATATGTGCGGCAGGAGAACGAGGAGATCTACACGCCACTCCATGTGGTGCCCCCGACCACCATTGGCCTGCTAAATGCGattgaaaacaaatacaaaatctCAACAACGAgcataaataacatatatcGCACAAATAAGAAGGGAATTACGGCGAAAATTGATGATGATATGATTTCCTTCTACTGCAACGAGGATATTTTCTTGCTGGAAGTCCAACAGATTGAGGATGATCTGTACGATGTGACGCTCACCGAGCTGCCCAATCAGTAG
Protein Sequence
MMQDATSSYAISYTDWIAESRRYSLEAAQHATPPPPSATPQQQQQQPQQQQQQHQQLHHQQQQHPHPHPQPHHQLQAHHLNHHQQHHQHYASQSPPHYSYVVPPKDAAAQLQLQLPLTAAGLMQSVADEIQLNEQQSTQPPAAPPPPPPPPPPLPLPLPPTAHASNSSYAVYSYYRNGDVDVDVDVEQQQQHQQQHNSRSQQDQQLLWSNASSTGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQHQQQQQQQQQQQHQQQQQHQQQQQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGSVITQKILRVDAARTEAEATATSTATATATAFEISDKTAAAATTTTTTTSETATSPASATTDLEMYASTGATQLYLQTSHQNSTGPSTQQSTLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFASDGQGGYVPAGTARSLYGEDVSVAAATQPQPVGGVYEARFTSNGPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQPQHQQQEQSVKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTNTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEIYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00535075;
80% Identity
-