Dmel009611.1
Basic Information
- Insect
- Drosophila melanogaster
- Gene Symbol
- grn
- Assembly
- GCA_000001215.4
- Location
- JANZWZ010001028.1:442008-472663[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-13 7e-10 38.6 5.8 1 27 420 445 420 450 0.96 2 2 5.4e-19 2.4e-15 56.1 6.3 1 35 467 500 467 501 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCGCTCGCAGCTGGTACGATAGTCCGCGTTTAGGCGGCGGCGGCTCCTCGGGCGGTGGCAATGGGGGCGGCGTCTCGCCCCAAACGAACGGCCTTGGCAGCGCCGGTAGCAGCCTGGCCCACAGCCACCACAGCCTCTCCAGCGGCGCCAGCTCGGCGGGCAGCAGCGTGGGCGTGGGCTCTGCTCTTGGCGGCGGCGGCGGATCCGGACTGGACACCAGCGACATGAGCGCCTTCTACGCGCTGGAGAGCAACGGACACCACCGGCGCTACTATCCCAGCTATCATCAGCACACATCCCGCATGCCCTCCACCCATGCCTCGCCTCAAGTTCCCTGGCTGACCAGCGAGCACAAGTCCTTCGCCCCCGCCAGCGCCTGGAGCATGGGTCAATTCGCCTGCCCGCAGGAGCCGCGGGTGGAGCACAAGCTGGGCCAGATGGGCCAGAGCCACCAGACGACGGCCGCCGGCCAGCATTCGTTCCCCTTCCCGCCGACGCCGCCAAAGGACTCCACGCCCGACTCCGTGCAAACCGGTCCATCCGAGTACCAGGCCGTGATGAACGCGTTTATGCACCAGCAGGCCACGGGCTCTCACCTCACTAACGGACGCCAGCTcggcaccacccacacgtcgacgcccaagcagcgcgaagctccaactctagcggcagtcagcagcagcagcagcagcaacaacagcagcaacaggcagcagcagcaacagcaaagtagcagcaacaccaccgccagcagcaacacatccgcctcgtcctccgccgcagcagcttccctgtctgccgccgtagccgcctccgcagccacatcctcgaacggactgttcgacggaacggcgcaggcgtacagcagcgggggaagtggcggtggcggcggcggtggcagcggcagcggtggctacgacaccagcagctatgcctcctatcaccatgcggcggcgcatcatcaagcggctgcggtggcggcagcgaATATGCGCCACCACCACCATCATCACCACCACAGTGGACACCATCACAGTGGCAGCTCGTCCGGATTGCACGGGCTGGGTGGCTCGGTGGGCGGTACCGCCGGCATGGGCAGCATGAGCGGCAACAGCGGCGGAGCGGGATCGCTGAGCGGTCACAGTGGCGCCGGGAGCAATGCGGGCAGCAATTGCCTGGACGTCAAGCCCGTGCGGACCAAGCCGCGGACTAGTGCTGAGGGACGCGAGTGTGTGAATTGTGGCGCCACATCGACGCCACTGTGGCGACGCGATGGAACGGGACACTATCTGTGCAACGCCTGTAGCACTCCAAAGCGAAGACTGACCCTGCAATCGCTGCAGAGTGCGGCCAAAAGGGCGGGCACATCCTGCGCCAACTGCAAGACCACAACCACAACCCTTTGGCGACGCAATGCCAGCGGTGAACCCGTGTGCAACGCCTGCGGATTGTACTATAAGCTTCACAATGTCAATCGTCCACTCACCATGAAAAAGGAGGGCATTCAGACGCGTAATCGCAAGCTGAGCTCCAAGTCCAAAAAGAAGAAGGGTCTCGGTGGTGGCTGCCTGCCAATCGGTGGCCACCTGGGCATGGGCGACTTCAAGCCGCTGGATCCCTCGAAGGGATTCGGCGGTGGCTTCTCTGCCTCCATGGCACAACATGGACACCTCTCGAGCGGACTGCATCCGGCACATGCGCACATGCACGGCAGCTGGTACACCGGCGGCATGGGCGCTTTGGGAGCCTCGAGCGGACTCCAGGGCGGCTTCTCCACCGCCGGCTCTCTCAGCGGAGCGGTGGTGCCCCACTCGCAGCCGTACCACTTGGGTCTCAGTTCGATGGGCACCTGGCGCACTGACTACACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGGSSGGGNGGGVSPQTNGLGSAGSSLAHSHHSLSSGASSAGSSVGVGSALGGGGGSGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPSTHASPQVPWLTSEHKSFAPASAWSMGQFACPQEPRVEHKLGQMGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSHLTNGRQLGTTHTSTPKQREAPTLAAVSSSSSSNNSSNRQQQQQQSSSNTTASSNTSASSSAAAASLSAAVAASAATSSNGLFDGTAQAYSSGGSGGGGGGGSGSGGYDTSSYASYHHAAAHHQAAAVAAANMRHHHHHHHHSGHHHSGSSSGLHGLGGSVGGTAGMGSMSGNSGGAGSLSGHSGAGSNAGSNCLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACSTPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLSGAVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00505769;
- 90% Identity
- -
- 80% Identity
- -