Dmel001644.1
Basic Information
- Insect
- Drosophila melanogaster
- Gene Symbol
- snpc-4
- Assembly
- GCA_000001215.4
- Location
- JANZWZ010000665.1:62289-64624[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.2 3.5e+03 -1.5 0.1 22 46 197 223 196 223 0.75 2 5 1.1e-09 1.8e-06 28.2 0.0 1 45 229 274 229 275 0.94 3 5 8.5e-05 0.13 12.6 0.0 3 45 286 332 284 333 0.91 4 5 9.6e-06 0.015 15.7 0.0 2 46 340 385 339 385 0.88 5 5 1e-08 1.6e-05 25.2 0.0 3 43 393 434 391 437 0.95
Sequence Information
- Coding Sequence
- ATGGACGATGCCGATGATCTGCGCATAAACCAGCAGCAGCTTATGGACGAGATTTCGGCCCTCTTGCAGAACACAGCGAAGCCGAGCGCCGCCAACGCACTGCAGCTGAATCAGGAGCTCCAGCGCCGGCTCATGCAAGTCCGGACCAAAATTCTGGCCATGTTACAAGTAGTAAGGGCCCGCTTCTCTCGGAACGAGGACATCCTGGTGCGCCGGCTGCGACCTCGTTCCCATTTCGGCCCGAATTCCCTCAATCTTAGCGGGGCGATCCTGCGGAAGGGCACGTTTCGCTTCAAGGGCAACCTGTTTTTCCGAGACATCGATGGTCGAAGCTGTCCTAACAACGAGGATTACGAGGCGCGGTGCCACACGGAGATGTTTCCCACCGACTTTGACATGCACTCCAGACATGTATGGACATTGCTAGACAAAAAGAATGTGATAATGGGTATAAAACAACAGTTACTGGAGCATAGGGCCCACAGTACGAATGCGCTGCCCAGCGGAAGCCTGAAGCGCAAGCCAATCGAGCGACACTTAAGCACACTGGTAAGTCTGCTGGCAACTGCGGATAGTAGCTTCAGCATCGACTGGAACCAGATCAGCACCCTGGACTTGGAATATCGGCACTCACCATATAGCTGTGAGGCAATGTGGAGGGTCTACTTAACACCAGATCTCAGGCGAGACGATTGGTCACCCGAGGAGGACGAAACTTTACTGGCGGTGGCCACTGCGAACAGGATGCAGAACTGGGAGTTGATAGCCGCGTCGCTAGACCGACGTTCCGACTATCAGTGCTTCGTACGCTTTCATACCGCCCTACGTTTTCTGCTGGAGCCAAAGAACAGCCACCGCTGGAGCGAAGAGGACAACGATAAACTAAGGGCGATCGTTGATAGGAATACGGCAAACAGTGTAATAAACTGGAAAAAAGTCGTGGAATACTTCCCGGACAAGTCCAAATCAACGCTGATTGGTCGTTACTACTACGTGTTGCATCCTAGCATCAGTCACGAACCCTTCACTACCAAGGAGGACATGATGCTGTTCGCCGCCGTTGAAGAGTACAATGGAAAGTTTCACTGTTTTCCGCGTTCTCTTTTCCCAAACCGGTCGTTAACCCAACTCCGAACTCGCTACCACAATGTACTGGCACAACGCAACAAGACCGACTCCTGGTCCGTTCAGGACGACACACGGCTGATGAGCTTCGTAACGCAATACGGGGCTTCCCAGTGGCTTAACTGTGCCACGTTCTTGGGCAATCACACGCGGACCAGCTGTCGAACCCGCTTCCTAGTCATCAAGAAATTCCTTGAACAAAATCCCAATGCAAAAGTGGAAGACCTGCCACGCCGCCGATCGAAGAAGGTGTCCTTGGTTAACTCTGATAACTGGGCGCAGCGTTTGCAAGAGTGGCAAGAGGACCCAGAGTCATTAGTTAATGATGACCGCCCGAAAGGAACTCGGGTGCGCGGTCCCAAATCGAAAAAGGCTAGGATCGAGCGACAGGCAGAGAGTTTCTCAAGACTTTCGAAAGTTGATATAGAGTTCTGCAACTTCTTTAAGTTTAGTTATAATCTGACGCTGAGCACTCCAAAAACTTTTCCAGTTCCAAAAGACGTTTATAACCTTGCCTACGTGATCAGAGCTCTTGCATATAAGCCACCAATTCGACCCTCGCTCTTACAAAACATATTTATGCCAAATGATGTGCTTAAGTGCTACAACAGCATGATCCGAAACCTTCCGGACGAGGAAGGTGATATGAAGAGCCCACTTTTGCCACCCAACTGGTCAACTATGATGGGGTTTCGGGCCTTATGCATTCTTTCCGGAGATTGTCGCAAGGATACGGAAACACAGCCGGCACCACAGAATGATCTAAAATCCGAGCCGCTTAGCGAGAATGAAGTGATTAATACAGTCAAGCAGGAATTGGAAATGGAATATACAGTTCCATAG
- Protein Sequence
- MDDADDLRINQQQLMDEISALLQNTAKPSAANALQLNQELQRRLMQVRTKILAMLQVVRARFSRNEDILVRRLRPRSHFGPNSLNLSGAILRKGTFRFKGNLFFRDIDGRSCPNNEDYEARCHTEMFPTDFDMHSRHVWTLLDKKNVIMGIKQQLLEHRAHSTNALPSGSLKRKPIERHLSTLVSLLATADSSFSIDWNQISTLDLEYRHSPYSCEAMWRVYLTPDLRRDDWSPEEDETLLAVATANRMQNWELIAASLDRRSDYQCFVRFHTALRFLLEPKNSHRWSEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISHEPFTTKEDMMLFAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRLMSFVTQYGASQWLNCATFLGNHTRTSCRTRFLVIKKFLEQNPNAKVEDLPRRRSKKVSLVNSDNWAQRLQEWQEDPESLVNDDRPKGTRVRGPKSKKARIERQAESFSRLSKVDIEFCNFFKFSYNLTLSTPKTFPVPKDVYNLAYVIRALAYKPPIRPSLLQNIFMPNDVLKCYNSMIRNLPDEEGDMKSPLLPPNWSTMMGFRALCILSGDCRKDTETQPAPQNDLKSEPLSENEVINTVKQELEMEYTVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00507541;
- 90% Identity
- -
- 80% Identity
- -