Dmel000407.2
Basic Information
- Insect
- Drosophila melanogaster
- Gene Symbol
- kn
- Assembly
- GCA_000001215.4
- Location
- JANZWZ010001302.1:213991-215753[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-82 4.7e-79 266.5 0.0 205 345 1 171 1 172 0.92 2 2 8.9e-12 3.3e-08 32.6 16.5 388 519 171 291 171 309 0.67
Sequence Information
- Coding Sequence
- ATGCGCCGATTTCAGGTGGTAATTTCTACGCAGGTGGCCGTGGATGGACCACTATTGGCCATCTCCGACAACATGTTCGTGCATAACAATTCCGAAGCACGGACGGAGGGCCAAAGCGGCTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTACCCACCGCTGCCAGTGGCCACGCCCTGCATCAAGGCGATCTCGCCCAGCGAAGGCTGGACAACCGGTGGCGCCACCGTGATCATAGTGGGCGACAACTTCTTCGATGGCCTGCAGGTTGTGTTCGGCACCATGCTGGTGTGGAGCGAGCTGATCACCTCGCATGCGATCCGGGTGCAGACGCCGCCAAGGCATATCCCCGGCGTGGTGGAGGTGACGCTATCCTATAAGAGCAAACAGTTTTGCAAGGGATCACCCGGTCGCTTCGTCTATGTCTCAGCTCTCAACGAACCCACAATCGACTACGAGATAATCCTCAAGAGGGCTGCCGATCTGGTCGAGGCGCTGTACTCCATGCCCAGCAGATCTCCGGGCGGCTCGACGGGCTTCAATTCCTATGCCGGTCAACTGGCGGTCAGTGTCCAGGATGGCTCCGGCCAGTGGACCGAGGACGATTACCAACGGGCGCAGTCGAGCAGCGTGAGTCCACGTGGTGGCTACTGCAGCAGTGCCTCCACGCCGCACAGCTCGGGAGGATCCTACGGTGCCACGGCGGCCAGTGCAGCGGTGGCAGCCACGGCCAATGGCTATGCACCTGCACCCAACATGGGCACACTCTCCTCGTCGCCCGGCAGCGTCTTCAATTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCACCAGGCGTTCGTGCAGCACCACCACGCGGCAACGGCCCACCCGCACCACCACTACCCACATCCCCATCAGCCGTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSEARTEGQSGWTPRKVQATHPCPFSGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHAATAHPHHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615327;
- 90% Identity
- -
- 80% Identity
- -