Basic Information

Insect: Drosophila mayri
Gene Symbol: -
Assembly: GCA_008042485.1
Location: VNJN01001215.1:213092-214869[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.6 2.5e+02 2.3 0.2 4 17 72 85 72 86 0.89

2 11 0.00019 0.013 15.8 4.1 3 23 221 241 220 241 0.98

3 11 9.8e-06 0.00069 19.8 2.4 3 23 253 273 251 273 0.96

4 11 1.6e-05 0.0011 19.1 0.4 1 23 279 301 279 301 0.99

5 11 0.0003 0.021 15.1 5.5 1 21 307 327 307 329 0.95

6 11 1e-07 7.1e-06 26.0 0.2 1 23 335 357 335 357 0.99

7 11 1.1e-05 0.00078 19.6 5.2 1 23 363 385 363 385 0.99

8 11 3e-08 2.1e-06 27.7 3.2 1 23 391 413 391 413 0.99

9 11 4.3e-07 3e-05 24.1 5.9 1 23 419 441 419 441 0.99

10 11 1.1e-05 0.00075 19.7 0.3 1 23 447 469 447 469 0.98

11 11 0.00076 0.053 13.8 3.0 1 23 477 499 477 499 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.6	2.5e+02	2.3	0.2	4	17	72	85	72	86	0.89
2	11	0.00019	0.013	15.8	4.1	3	23	221	241	220	241	0.98
3	11	9.8e-06	0.00069	19.8	2.4	3	23	253	273	251	273	0.96
4	11	1.6e-05	0.0011	19.1	0.4	1	23	279	301	279	301	0.99
5	11	0.0003	0.021	15.1	5.5	1	21	307	327	307	329	0.95
6	11	1e-07	7.1e-06	26.0	0.2	1	23	335	357	335	357	0.99
7	11	1.1e-05	0.00078	19.6	5.2	1	23	363	385	363	385	0.99
8	11	3e-08	2.1e-06	27.7	3.2	1	23	391	413	391	413	0.99
9	11	4.3e-07	3e-05	24.1	5.9	1	23	419	441	419	441	0.99
10	11	1.1e-05	0.00075	19.7	0.3	1	23	447	469	447	469	0.98
11	11	0.00076	0.053	13.8	3.0	1	23	477	499	477	499	0.97

Sequence Information

Coding Sequence: ATGGAAGGCTCCAGCATGGAGAAGACCTGCAGGGTATGTGCCGGGCTCTCGACGGTACTGGTGGACCCCTTCTCCACGGAGATCTCCGATCCGCCGATTTCTGAAATGCTCAACTCGATTCTGGCCGAGAACTGCCGCGTCAATCGGGATGCCCTACCCCAGAAAATCTGTCCAACATGCCTGGTGGCTGCACAGCAAGCGTTCTACTTTAAGCACAAGTGCGAGAGGAGCTATCGTTACTTTTCCAACCTCCTCACGGTAGGTAGGAGTGCCGAGAAGGAAACGCTCATTGCCTTCGAGATGGTCGGCTGTGAGGACCCGCTGGACAGCACAGAGCTGCCGAAAAGCGAAGCGGACGATGTTGGACTGGTTGTAAAAGCTGATATCGATTCCGAACCCTCGGAAGGAGTTCGggaatTGGACATGAATGGTGAAATAAAGATAGAAAAAGAGCCAATGTCCAACGGGGCTTCAATCGACGGTGAGGATGAAAACGAAGCCGAAGAAGACAACGAAGAGGATTATAATGAGGATGACGAAGGAGATGACGATGAGGAAGATGATTGGTCTGATGACTGGTCCGAAGACCTTGAGGAGTCTAGGATTCCTACCGATTCTGAGACCAAGCCACGGGCTGTCGAGGAAAATCTATCCCTTCTGTGCACCGAGTGCGGTTTGACCTGCAAGTCGCATAGTTTGTTGAAGAGACACATCGCGCGCCACAAGGAGACTAAGGATCCGGAGCGACCGCATTTGTGTGACACCTGTGGCCGCGGCTTTAGGACAAAGGTGCAACTCACAATCCACACGCGAAGGCATACGGGAGAGCGACCCTTTAAATGTACCATCTGCCCGAAGGCATACACCTACGGCCCGACGCTCAGAATGCACATGCTGACCCACGACGAGACGAAGGCCCACAAGTGCTTGGATTGCGAAAAGTCCTTCTACAGCACCTCCAGTCTAAGGGCTCATCAACGGTGTCATTCGGGCGACCGACCTTACCAGTGTCCCGACTGCCCGCAGGCCTTTAGCAAGAACTCGGCCCTGAAGCTGCACCAGCGCCTGCATACGGGCGAGCGTCCGTACAAGTGCCACCTGTGCGATCAGGGCTTCGTCCAAAACCACCACCTCGTCACCCACCTACGCGTCCACAACATGGATCGGCACTTCAAGTGTCCCGACTGCGACAAGTCGTTCTTTGAGAAGTCCAACATGAAGAAGCATCAGCGCACCCATTCGGGTGTGAAGCCGTTCCAGTGTGAGGAGTGCGGCCGCGGTTTCTCGCATAATCATCACCTGAAGAACCACCTTCGCGTCCACACCGGCGAGAAGCCCTACAAGTGCGAAAAGTGCGGCAAGCGATTCGGCGCAAATCAGTCGCTCGCAAAGCACATTCTGTGGCACGCGGAGAACCAGGATCGCGCCTTCAACTGCTCCAAATGCCACAAGGGCTTTGACAAATTGCAAGGCTTACGAGCACACGAGAAGAAGCACAAGAGACAAGACGAGCCGAATCAGCTGTACAAGTGTCCGCATTGCGACAGTTATGCGAAGCACCTACGGCAGCATAATCTCAAGAACtag
Protein Sequence: MEGSSMEKTCRVCAGLSTVLVDPFSTEISDPPISEMLNSILAENCRVNRDALPQKICPTCLVAAQQAFYFKHKCERSYRYFSNLLTVGRSAEKETLIAFEMVGCEDPLDSTELPKSEADDVGLVVKADIDSEPSEGVRELDMNGEIKIEKEPMSNGASIDGEDENEAEEDNEEDYNEDDEGDDDEEDDWSDDWSEDLEESRIPTDSETKPRAVEENLSLLCTECGLTCKSHSLLKRHIARHKETKDPERPHLCDTCGRGFRTKVQLTIHTRRHTGERPFKCTICPKAYTYGPTLRMHMLTHDETKAHKCLDCEKSFYSTSSLRAHQRCHSGDRPYQCPDCPQAFSKNSALKLHQRLHTGERPYKCHLCDQGFVQNHHLVTHLRVHNMDRHFKCPDCDKSFFEKSNMKKHQRTHSGVKPFQCEECGRGFSHNHHLKNHLRVHTGEKPYKCEKCGKRFGANQSLAKHILWHAENQDRAFNCSKCHKGFDKLQGLRAHEKKHKRQDEPNQLYKCPHCDSYAKHLRQHNLKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00478141; iTF_00488789;
90% Identity: -
80% Identity: -