Basic Information

Gene Symbol
ct_1
Assembly
GCA_008042485.1
Location
VNJN01005498.1:5807-21128[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.7e-27 3.8e-23 81.1 0.0 3 72 653 723 651 728 0.95
2 3 1.9e-31 1.6e-27 95.2 0.1 3 73 986 1057 984 1061 0.96
3 3 2.8e-31 2.3e-27 94.7 0.0 3 76 1128 1202 1126 1205 0.96

Sequence Information

Coding Sequence
ATGGAGGAACTGCAGCGCCTGCAGGCCCTGGAACAGACGCACCTGGTGCAGATCCAGCGACTGGAGGAGCATCTGGAGGTCAAGCGGCAGCACATTATACGACTGGAGGCCCGCTTGGATAAGCATCAGATCAATGAGGCCCTGGCGGAGGCCACTGCCTTGGCAGCCGTtaccgctgccgctgttgccgctgccaacaacaacaataacaataacaacaataatagtCAGAGCAGTGAtcacaataaattaaattccggCACCACCAAGGCCGCATCAGCATCCTCCAGTGATCCTGcggagagcagcagcaaggtcgccgccgccgacgaggaggaggaggaggaggacgaggccATGCTGGTGGATGCCAGCGAAGAGGTGAAAACGGAGGAGAAGGTGAAGACGGAAGAGCGACAGCGGCGAATGGACGAAGACGAGGACgaagaggatgaggaggatCAAATTAGCGAGCATCGGGCTGCTGATCGAAGGATCGCCAGTGATAGCAATGAGATCAAAATCGAAAAGGAACAGCAcAGCCCTCTGGACCTTAACGTGCTCAGTCCGCAGTCGGCgattgccgctgccgccgccgctgccgctgccgccgcctgtgcCAATGACCCCAACAAATTCCAGGAGCTGCTCATGGAGCGGACCAAGGCCCTGGCTGCCGAGGCGCTCAAGAATGGCGCCAGCGATGCCGTCAATGCCATTAGCGAAGAGAACAGCCCCCAGAAATCGGAAGTTATAGCTGAAGTTATTGATGCGCCCATTGAAGCCACTAAAATGGCACCCAAAATGGAGCTACCCGATgctaatgatgatgatgaaccccaaccggaaacggaaacggtaACGGtaaccgaaactgaaactgaaactgaaaccgaaaccgaatcAGAAGTATTGCTGCAGGAGCAGCTGGTCAATAGCTATTGGCGTCGCGGCTTTGATGCAACGCCTCCGGGGAGCAAAACGCCAACAATTTATCAGGGAATTAGACCGGTCGATCCTCAGCAGCAATTATTGttgccgccaccgcctccgccgccacTGCCTTCCATGGCCCCAACGGCTaaccaccagcaacaacaacaatcacaTCTCTTTAATAatccacaacaacagcaacagcaacatggACCCTCGTCCACCGCCTTGCTTAGCCAACTGGTTAACTCAACCTTTTCCAATACCAACACCAACTCAACCACCAATTCCTCCAACTTATCCTCCCGCACAGATGCCCACCACCAACACCAAAGGGAACGGGAACGTGAACGTGAACGGGATCATCATTtacacagcaacagcagcagcgggaatAGCAGCTCTTCGAACCACCATCACCCACATtctcaccagcagcagcagcagcagcatcatcagtCGGATGGACTGAACCACCATCATGGCCTCAATCATCACCTGCAGCATGCCGGTTTGCTACATCCttcggcggcagcggcagcagcagctcatcaTCACCTGCATCAGCATCAGGAGTCCAGCTCGAACTCCAGTGCCACCAGCACACCCACCGCTGTCGGAGCTGGCGGAGCCGGATCAGCGGTAACTGGATCGGCATCGGGAACCGCAGGCACCGCCTTGAATGGCAGCAAATCGCTGGGCGAGGATGCCGCCACAAATGGTTTGGCCGCCGCTGCCATGGCCGCCCATGCCCAGCATGCGGCAGCCGCTGCTGTTATGGGTCCCGGATTTTTACCTGGCCTACCGTCTGCCTTTCAATTCGCTGCCGCCGCCCAGGTGGCCGCCGGTGGCGGTGATGTTGTGGGACGCGGACATTATCGTTTCGCGGATGCGGAACTGCAATTACCACCGGGTGCCTCAATGGCCGGTCGCTTGGGTGAATCATTGATACCCAAGGGTGATCCCATGGAGGCCAAGCTCCAGGAGATGCTGCGCTACAACATGGACAAATATGCCAATCAGGCACTGGATACCCTTCATATCTCGCGACGCGTCCGAGAGTTGCTCTCCGTGCACAACATTGGCCAGCGGCTATTTGCCAAATATATCCTGGGTCTGTCCCAGGGCACCGTCTCCGAGCTCCTCAGCAAGCCAAAGCCGTGGGATAAGCTGACGGAGAAGGGAAGGGATAGTTATCGGAAGATGCATGCCTGGGCGTGTGATGATAATGCGGTGATGCTGCTCAAATCGCTGATACCCAAGAAGGATTCTGGTCTGCCACAGTACGCTGGTCGCGGTGCCGGCGGCGCTGGCGGTGATGATTCCATGTCCGAGGATCGCATCGCCCACCTTCTCAGCGAGGCCTCGTCCCTGATGAAGCAGAGCAGCgttgcccagcagcagcagcaacagcagcagcgggagcaTGAGCTGCGTCGTCATGGCGGCGGCCTGATTGagcagcagcagcgtttgAGGCACGAGGATCTGGCCCAGGATAAGATGGCAAGGATGTATCAGGAGATTATAGCACGAACCCCGCGGGAGGCACCATTTCCCGGCTGGTTGTTTTCACCCATTTTCGGAGGAGGCGCCGCTGGCAACGCCTTTCCCAGCATGGCCGATGAGAATATGCGGCATGACGGCGAACGCGATGAGCCTGGCTATCCATCGTCGCTGCATGGTCGCAAATCTGAAGGAGGCGGCACACCGGCACCCGGACAGGCGCCAACATCAGTGCCAGTTGCATCCTCAGCAGTGGCCGGTTCGGGGGCGGGAGCAGGAGCCGGGGCCAGCAGCAATTCGGCAGCGCCCAGCCCGTTGAGCAACTCCATCTTGCCGCCAGCTTTGAGCAGCCAGAATGAAGAGTTTGCCGCCACCGCCAGTCCCTTGCAGCGAATGGCATCCATTACGAACTCGCTGATCACCCAGCCGCCGGTGACGCCGCATCACAGCACTCCGCAGCGTCCGACCAAGGCAGTCCTGCCGCCCATCACCCAGCAGCAGTTCGATATGTTCAACAACCTCAACACGGAGGATATAGTGCGTCGTGTGAAGGAGGCCCTCTCCCAATACTCGATCTCCCAGCGTCTCTTTGGCGAGTCAGTGCTGGGCCTGTCCCAAGGCTCTGTCTCTGACCTGCTGGCCCGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGACGCGAGCCCTTCATCCGCATGAAAATGTTCCTCGAGGACGAGAATGCTAGCATGCTGTTGACCTCACCGGGACTGCCGCCACAGCATGCCATTAGCCTGCCACCGGGCAATCCTGGCCAGAATCAGAGCAACTCCGGCTCCGGCCAGAATTCCGCCAATAGCGAGAAGAAGCCCATGCTAATGCCGGTCCATGGCACCAATGCCATGCGCAGCCTGCATCAGCATATGTCGCCCACCGTTTATGAGATGGCTGCCCTCACCCAGGATCTGGATACGCACGACATTACCACCAAAATCAAGGAGGCTTTGCTGGCCAATAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTCGGCCTATCCCAGGGCTCCGTCTCGGAGCTCCTCAGCAAGCCGAAGCCCTGGCACATGCTCTCCATCAAGGGCCGGGAGCCCTTCATCCGGATGCAGCTTTGGCTGAGCGATGCCAACAATGTGGAGCGTCTGCAGCTGCTTAAGAACGAGCGGCGGGAGGCGAGCAAGCGGCGCAGGAGCACCGGACCCAATCAGCAGGACAATAGCAGTGATACATCCAGCAATGATACCAATGATTTCTACACCAGCAGCCCCGGTCCCGGTTCTGTGGGCTCGGGTGTGGGCGGCGTAGGTGGGGCTCCGCCCAGCAAAAAGCAAAGGGTGCTCTTCTCCGAGGAGCAGAAGGAAGCCCTCCGACTGGCCTTCGCCCTGGATCCCTATCCGAATGTTGGAACCATTGAGTTCCTGGCCAACGAGCTAAGCCTGGCCACGAGGACGATCACGAATTGGTTCCACAACCACAGGATGCGGTTGAAGCAACAGGTGCCGCACGGCCAGCCGGGTCAGGATAATCCCATACCCAGCAGGGAGAGCACCAGTGCCACACCCTTCGATCCCGTCCAATTCCGGATCCTTCTGCAGCAGCGTCTCGTCGAGCTGCACAAGGAGCGCATGGGTCTCAGTGGGGCACCCATTCCGTATCCGCCCTACTTTGCAGCGGCTGCCCTGTTGGGCCGGAGCTTGGCCGGCATACCAGGAGCAGCGGCCGCTGCTGGTgcggcagccgcagcagcggcagctgtgggcggcggcggagTTGGTGGTGCCACCACCAGCGAGGAGCTGCAGGCTTTAAATCAGGCCTTCAAGGAGCAGATGAGCGGCCTGGATCTGTCGATGCCCACGCTGAAGCGTGAGCGTAGCGATGACTACCAAGATGACCTCGAGCTggatcatcatcagcagcaccatcacctccagctgcagcagcatctgcagcagcagcaccagcaccagcacagCGACAATGAGTCGGAGCAGGATCAGCTGGAGGATAACAAGAGCAGCGACTACGAGAAGGCCCTGCACAAGTCCGCTTTGGCCtcggcggcagcggctgccGCTTACATGTCCAATGCGGTAAGGAGTTCTCGCCGCAAGCCAGCTGCCCCCCAATGGGTGAATCCTGCTGGCGTTGGTGGCggtgccacgcccacgccgAATGCTGTTTTagctgccgctgcagcagcagccgcagccgccgcagcagcggcCGCAGCAGCCACGGCGGCGGAGAGCGAGAGGATCATCAATGGGGTGTGCGTGATGCAGGGCTCCGAGTATGGGCGCGATGATTCGGAGCAGGCTGGCAAGGAGTCGGCTGGCGGGGATTCTGATCATGAGCATGCCCAGCTGGAGATTGATCAGCGCTTCATGGAGCCGGAGGTGCACATtaagcaggaggaggaggatgacgaggacgaggaggaggagcagcagcagcagcagcagcagccaagccTGGAGGGTGCTGCCGATgaggcacagcagcagcagcagcagctgaaggtGGTCAACGAGGAGAAGCTGCGGCTGGTGCGAGTGCGTCGACTGAGCAGCACGGGCAATGGTTCCGCCGATGAGATGCCCGCCCCCACAGCACCGTCAGCTTCCTCGGCTCCAGCCGGTGAGGCCGCCAGCAACAGCAccacagccagcagcagcagcagcagcagcagtcccctGGCACCGCCAGCGGTGACCGCCAGTCCGAGTCCTGCGGGATGGAACTACTAG
Protein Sequence
MEELQRLQALEQTHLVQIQRLEEHLEVKRQHIIRLEARLDKHQINEALAEATALAAVTAAAVAAANNNNNNNNNNSQSSDHNKLNSGTTKAASASSSDPAESSSKVAAADEEEEEEDEAMLVDASEEVKTEEKVKTEERQRRMDEDEDEEDEEDQISEHRAADRRIASDSNEIKIEKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQELLMERTKALAAEALKNGASDAVNAISEENSPQKSEVIAEVIDAPIEATKMAPKMELPDANDDDEPQPETETVTVTETETETETETESEVLLQEQLVNSYWRRGFDATPPGSKTPTIYQGIRPVDPQQQLLLPPPPPPPLPSMAPTANHQQQQQSHLFNNPQQQQQQHGPSSTALLSQLVNSTFSNTNTNSTTNSSNLSSRTDAHHQHQRERERERERDHHLHSNSSSGNSSSSNHHHPHSHQQQQQQHHQSDGLNHHHGLNHHLQHAGLLHPSAAAAAAAHHHLHQHQESSSNSSATSTPTAVGAGGAGSAVTGSASGTAGTALNGSKSLGEDAATNGLAAAAMAAHAQHAAAAAVMGPGFLPGLPSAFQFAAAAQVAAGGGDVVGRGHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGAGGDDSMSEDRIAHLLSEASSLMKQSSVAQQQQQQQQREHELRRHGGGLIEQQQRLRHEDLAQDKMARMYQEIIARTPREAPFPGWLFSPIFGGGAAGNAFPSMADENMRHDGERDEPGYPSSLHGRKSEGGGTPAPGQAPTSVPVASSAVAGSGAGAGAGASSNSAAPSPLSNSILPPALSSQNEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENASMLLTSPGLPPQHAISLPPGNPGQNQSNSGSGQNSANSEKKPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRESTSATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGGGGVGGATTSEELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDLELDHHQQHHHLQLQQHLQQQHQHQHSDNESEQDQLEDNKSSDYEKALHKSALASAAAAAAYMSNAVRSSRRKPAAPQWVNPAGVGGGATPTPNAVLAAAAAAAAAAAAAAAAATAAESERIINGVCVMQGSEYGRDDSEQAGKESAGGDSDHEHAQLEIDQRFMEPEVHIKQEEEDDEDEEEEQQQQQQQPSLEGAADEAQQQQQQLKVVNEEKLRLVRVRRLSSTGNGSADEMPAPTAPSASSAPAGEAASNSTTASSSSSSSSPLAPPAVTASPSPAGWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00540969;
90% Identity
iTF_00540969;
80% Identity
iTF_00540969;