Basic Information

Gene Symbol
Kdm5
Assembly
GCA_008042485.1
Location
VNJN01010320.1:143375-149394[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.6e-27 2.6e-23 82.1 0.1 2 89 230 313 229 313 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAAACCGAGGCGGACAATACAACAGCCGCCCATTCAGGCGGCATTGGTGGAGGCGCCAATAGCAGCGGCTCGTCCTCCGCCGGCGGCACAGCATCCGCCAACGGAACAGCGACTCCAGCCCGTCGCCTACGCACTCGCAACTCAACCGGCCATGGAGCAGCCAGCGGTGGAGAGTCGGCCAAGAAATCAAATGTCAGCGATGAAATCTCCTCCACTCCTGCCACACCGGTAGGTGCGCATATCACGGCCGCTGCAGCCGGCCCAACGATGGTGGTTGAACGCCCCATGCCCAGTGTACCGATGAACCatgccagcagcagcgtttCTGCCAGCAAGAAGTATCACAACAGCTGCCCCCATCCAACTCCTACGCCCCCGTCCGGACACAAGAAGACGGTGCACACGCAGccgcacagcagcaacaagttcGACCAGGGAAAAAACGAAGAGTTTCACTTTGACACTCCGCCAGAATGTCCCGTATTTCGTCCCACTACCGAGGAGTTCAAGAATCCACTCGCATATATAAGCAAGATCCGATCGATAGCTGAGAAATGCGGCATCGCTAAGATACAGCCGCCGGCCTCCTGGTCGCCACCGTTTGCCGTTGATGTGGACAAGTTGCGCTTTACACCACGCGTTCAGCGCCTTAACGAACTAGAGGCCAAGACGCGCGTCAAGCTTAACTTCCTCGACCAGATTGCCAAGTTCTGGGAACTGCAGGGCTCCTCTCTCAAGATTCCGATGGTAGAGCGTAAGGCCCTCGACCTGTACACACTGCACCGTATCGTGCAAGAAGAGGGCGGCATGGAGCAGACCACGAAGGACCGCAAGTGGGCCAAGGTGGCCAATCGAATGCAATACCCTTCCAGTAAGAGCGTGGGCGCCACATTAAAGGCGCACTATGAACGAATTCTACACCCCTTTGAGGTGTACACATCCGGCAAAGTATTGGGACCCACGCCAGCCGCAACTGCTGGATCTGTGGGCGGTACGCCGGTGAAGCTGGAAGACGGCGGAGGCGGCACCGATTACAAGGTCCATGAGATACCAACACGGCAACAGATTGCGCCGCCAAACGAAAACAGCACTCGGCGTTCCAAGCGCTTTGGCAACTCGAGCGCTAGCTGCGGCCTAAGCGGCACAACGACACCCAAGCCTTCCGCCACCGGGGTTTTCGTCAAGACAGAGCCCAAGGAAGAGTTTAAACGAGATCTGCTTAGCAGCTTCAATGCTTCAATAAATAGCGGTGGCGGCAGCACGCCGTCAGCTGGCGGTGGGGGTCCTGCCAACACTCGTGGCGCCAACCAAAAAAAGGGACTCGGCGAACCCCCGGCCCTGATTGTCGATCCCCTAATGAAGTACATTTGCCACATATGCAATCGCGGCGACGTCGAGGAATCCATGCTACTCTGCGATGGCTGCGACGACAGCTATCACACCTTCTGTCTGCTTCCACCACTGACCAGTATACCAAAAGGCGAATGGCTCTGCCCGCGCTGCGTTGTTGAGGAGGTCAGCAAGCCGCAGGAAGCTTTTGGTTTCGAACAGGCAGAACGGGAATACACACTCCAGCAGTTTGGACAAATGGCCGATCAATTTAAGCAGGAGTACTTCCGCAAACCGGTGCATCTGGTGCCCACCGAAATGGTGGAGCGGGAATTCTGGCGCATTGTGTCCTCCATTGACGAAGATGTGACCGTTGAGTATGGCGCCGACTTGCATACAATGGATCATGGCTCCGGCTTTCCCACCAAGAGCTCACTGTATTTGCTGCCCGGTGACCAGGAATACGCCGAGTCCAGCTGGAATCTGAACAATCTGCCGCTGCTAGAGGATTCCATTCTGGGTCACATTAACGCCGACATTAGCGGCATGAACGCGCCATGGATGTATGTGGGCATGTGCTTTGCTGCCTTTTGCTGGCACAATGAGGACCACTGGAGCTACTCGATCAACTACCTTCACTGGGGAGAGCCGAAGACATGGTACGGCGTGCCGGGATCCTGTGCCGAGCAATTTGAGGAGACCATGAAGCAGGCAGCTCCCGAGCTCTTCTCCTCCCAGCCCGATTTGCTGCATCAACTGGTGACGATTATGAACCCCAACATCCTGATGAATAACCGCGTACCAGTATTCCGTACCGATCAGCATGCCGGCGAATTTGTGATCACGTTCCCTCGCGCCTATCATGCTGGCTTCAACCAGGGCTACAATTTTGCGGAGGCGGTGAACTTTGCGCCCGCGGATTGGCTGAAGATGGGACGGGAGTGCGTCAATCACTACTCCATGTTGCGTCGCTTCTGCGTCTTCTCCCACGATGAGCTCGTTTGCAAAATGGCCCTGGAGCCAGCCAAGCTGACCTTTGGCATTGCCACCGCCTGTTATATCGACATGGCTGAAATGGTAGACACGGAGAAGAAGCTGCGAAAATCTCTACTTGAGTGGGGCGTAACGCGTGCCGAGCGGCGGGCCTTTGAGCTGGTTAACGACGACGAACGCCACTGCCAGGAATGCAATACCACGTGCTTCCTTTCGGCTGTGGCCTGCGAGTGCAACGACAAGCTGATTGTCTGCCTGCGTCACTACACAGTGCTGTGCGGATGTGCTCCAGAGAAGCACACGTTGATCTATCGCTATACCCTGGACGAGATGCCGCTGATGCTGCAAAAGCTGAAGGTTAAGGCGCACAGCTTTGAACGTTGGCTATCCCGTTGCCGGGACATTGTAGATGCGCATACACCCACTTCGGTGACACTGCAGGAGCTACAGGAGCTGTGCAAGGAAGCCGAGACTAAGAAATTCCCATCATCGCTGCTAATCGACCGTCTCAATGCAGCGGCCATCGAGGCCGAGAAATGTGTCACAGTCATCCAACAATTGGGAATTAATAAGGTTCGAACCCGCTCCGATCACAACCAGGAGGCGGCTCAATACAAGCTGACCATGGAGGAGTTGGAGCTGTTTGTCCAGGAAATCGATAATCTCTGCTGCATCATCGACGAGGGGGCATCGGTGCGTGAACTCCTTGTGCTTGGCAAACAGTTTGTGGATCGGGCAGACGGACAGCTGCAACTGACGTTGGAAGCACTGGAGGAGAGTGAACTAGAGACGCTGATCAGCGAGGGTAGCTCACTCCGCAttgagctgcagcagctcgaTTTGCTGCAGAAGCGACTCAAACAGTGCAAGTGGTACAAGCGCTCGCAGGGATTGCGGGAAACAAGCTCGAAACTGACGTATCAGGACGTGAAGAACCTTCTGCACATGGCAGGCGCCGATTTGGATCCAACGGATCCTTATGTCGACAGGGAAATGCGCAAGCTTCAGCAGATAGGAGCGGACATCGAGTCTTGGGAGTCTCAGGCGGCCAAGTACTTCCGGCGGCTGACACAACAACACGAGTTGGCCGAAATCGAGCAGTTCCTCAAGTCAGCCGGCGATATTAACGGTCAGGTGCCGTCGCATGGCCTGCTTAAGGATGCGCTGCGCAAGGCACGCGAATGGCTGCGGGCagtggagcagctgcagcagaatAACCACGTCACCTATTGCCACACGCTCGAGGCGATGATTGAACGCGGCCTGAACATACCCATTAAACTGGAGGAGCTCAGTCGGATGCAGGGTCACCTCAGCAGTGCCCACCAGTGGAAGGACAATACAGCGTGTGCCTTCCTCAAGAAGGGCACCTTTTACACGCTCCTGGAGGTGCTGATGCCTCGGGCGGATGCCATTAATATTGACTCGGATCTCAAGCCACGATTTCAGGACGactttttaaaagaaaaaaatccgGCGGAGATTGTGGCCAGCTTTAAGAATgccgaggagcaggagcttcTGGATATGCGCGACCTGCGGCGCCAGAATATGACCAAGAATCCATTACGCGACATGTTCTGCCTGTGCAAATCAGAGTTCCGAGGCCTAATGTACAACTGTCAGCTGTGCCGCGACTGGTTTCATGAGGATTGCGTTCCAGTGCCATCGACGACGAATCAAAATGGCCTTCAAAACGGTGGAGGTGGCGGCACAGGAGCAGGATCGAATCGCCCGAAGTGGCTTTGTCCGAGCTGCGTGCGTTCTAAGCGGCCCCGTTTAGAGACCATCCTGCCGTTGCTCGTCCAGTTACAACAACTACCCATCCGTCTGCCCGAAGATGAGGCCTTGCGGTGTCTGGCGGAGCGTGCAATGAACTGGCAGGATCGGGCCAGAAAGGCGCTGAGTAGTCCCGATGTGAGCGCCGCCCAGGAGGCGATACTCgctcagcaacagcaacaaaagcgTCGATCCGAGGGCGTGGCCGGAGTGGGCAATATCAATAGCCCGCGAAAGCCGCGTCGCCGCACTAGCCTGTCAAAGGATGCCAGCGGATCCACCGAGTCAGATGAtgccgatgatgatgacgacgatgacgattGCCGGTTGCGTATCGTTGAGGATGGGTTTAGCAACGACGAGGATGAGCACCGCACCCCCGCAACAACTGTGACCGCGGCGGTGACCAACCCGACGACGAATTCCGATCTCCTAAAGCTGCTGTCTGACAGCGAAATTGAGAATCTGCTCGATCTAATGATGGAAGGTGACCTGCTAGAGGTCTCCTTGGATGAAACCTACGAGCTGTGGCGCATTCTTGAGACGATGCCGCCCACGCTGTTAGAGGCGGAGGCCATTGAGCGAGTTGCCATGCATTTGCAGCGCCAGCGGCAACAGCCGCAACCGCCAAATCCGCTGGCCGCCACCTCGGGTGCGGAGGACTCCAACGATAGCCTTCTGGTGCAAAACAGTAGTCCcaatagcaacagcaacagtggTGGAGCAACAGCATCGGCCAACactaataataacaacaacaacggtcGCAACAAGAACAAGCGGCGTTCCAACGATGCCAGCGGCAACTCGGCTGTGCCGCGAAAGAAGCAGAACACGCCGAAGCAGACGCCGGTGAAGAAGGGAGCGGGTGCGGGTGCAACTGCGGGACGCAAGAGTGACGCCTCCAAGGCATCGCCAGCAGCGTCTGCTGGGGgtgccgatgccgatgcggAAAACAAGCAGGCCAATGGCGGCAACATTAACTCCAACGCTGGAGCAGCGACCACCACAACACCAACTGCTCCTGGCTCGGCGCACAAGAAACGCAAACGCATCTCTACagcaaccgccgccgccaataacaataacaacaactccAACACCAACAATAACGGCAACAATGCCAACAGTAATCCTGCCCAAGCAACAGGAACCACCGGCAGCGGCAATAGCACAACCGGCGGTGGCCAGAAGAAGCACGCCCAGCGATCACAGCAGGCCGCCCAagaggacgacgaggaggagtgCCGGGCTGAGAATTGCCACAAGCCCACCGGGCGGGAAGTGGACTGGGTACAGTGCGATGGAGGGTGCAACGAGTGGTTCCACATGTACTGCGTGGGACTTATACGCAGCCAAATCAAGGCGGATGACGACTACATCTGCATTCGATGCACCAAGACGGTGGCAGTGGCGGCTCTTGGCTCCGGAGCGGGggccacgacgacgacgacaccGGGCAAGCAGCGACAAGCGGCGCAATCGGCGCGGTAA
Protein Sequence
MSAKTEADNTTAAHSGGIGGGANSSGSSSAGGTASANGTATPARRLRTRNSTGHGAASGGESAKKSNVSDEISSTPATPVGAHITAAAAGPTMVVERPMPSVPMNHASSSVSASKKYHNSCPHPTPTPPSGHKKTVHTQPHSSNKFDQGKNEEFHFDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKIQPPASWSPPFAVDVDKLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPTPAATAGSVGGTPVKLEDGGGGTDYKVHEIPTRQQIAPPNENSTRRSKRFGNSSASCGLSGTTTPKPSATGVFVKTEPKEEFKRDLLSSFNASINSGGGSTPSAGGGGPANTRGANQKKGLGEPPALIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVDRADGQLQLTLEALEESELETLISEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHMAGADLDPTDPYVDREMRKLQQIGADIESWESQAAKYFRRLTQQHELAEIEQFLKSAGDINGQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIKLEELSRMQGHLSSAHQWKDNTACAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKEKNPAEIVASFKNAEEQELLDMRDLRRQNMTKNPLRDMFCLCKSEFRGLMYNCQLCRDWFHEDCVPVPSTTNQNGLQNGGGGGTGAGSNRPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAAQEAILAQQQQQKRRSEGVAGVGNINSPRKPRRRTSLSKDASGSTESDDADDDDDDDDCRLRIVEDGFSNDEDEHRTPATTVTAAVTNPTTNSDLLKLLSDSEIENLLDLMMEGDLLEVSLDETYELWRILETMPPTLLEAEAIERVAMHLQRQRQQPQPPNPLAATSGAEDSNDSLLVQNSSPNSNSNSGGATASANTNNNNNNGRNKNKRRSNDASGNSAVPRKKQNTPKQTPVKKGAGAGATAGRKSDASKASPAASAGGADADAENKQANGGNINSNAGAATTTTPTAPGSAHKKRKRISTATAAANNNNNNSNTNNNGNNANSNPAQATGTTGSGNSTTGGGQKKHAQRSQQAAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLIRSQIKADDDYICIRCTKTVAVAALGSGAGATTTTTPGKQRQAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00608964;
90% Identity
iTF_00606100;
80% Identity
-