Basic Information

Insect: Drosophila mayaguana
Gene Symbol: -
Assembly: GCA_037075325.1
Location: JBAMCG010000040.1:17300832-17305150[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.81 55 4.5 5.7 2 23 334 356 333 356 0.96

2 17 0.0073 0.5 11.0 1.6 2 23 399 420 398 420 0.94

3 17 5.9 4e+02 1.8 3.0 2 17 431 446 430 457 0.75

4 17 0.026 1.8 9.2 0.3 3 23 490 510 488 510 0.95

5 17 0.0028 0.19 12.3 0.3 1 23 518 541 518 541 0.98

6 17 0.00043 0.029 14.8 0.3 2 23 546 567 545 567 0.97

7 17 0.42 29 5.4 0.0 1 20 575 594 575 596 0.93

8 17 0.0001 0.0069 16.8 0.4 1 22 615 636 615 639 0.90

9 17 0.035 2.4 8.8 0.5 1 21 644 664 644 665 0.93

10 17 0.0017 0.12 13.0 0.4 1 23 684 709 684 709 0.97

11 17 0.01 0.71 10.5 1.6 2 23 725 747 724 747 0.93

12 17 0.00094 0.064 13.8 0.3 3 23 754 775 752 775 0.92

13 17 0.008 0.55 10.8 0.2 2 23 779 801 778 801 0.96

14 17 0.0002 0.014 15.9 2.7 1 23 807 829 807 829 0.98

15 17 0.01 0.71 10.5 0.6 1 23 833 856 833 856 0.93

16 17 0.00012 0.0085 16.5 1.0 1 23 862 885 862 885 0.97

17 17 0.00044 0.03 14.8 2.5 1 23 889 917 889 917 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.81	55	4.5	5.7	2	23	334	356	333	356	0.96
2	17	0.0073	0.5	11.0	1.6	2	23	399	420	398	420	0.94
3	17	5.9	4e+02	1.8	3.0	2	17	431	446	430	457	0.75
4	17	0.026	1.8	9.2	0.3	3	23	490	510	488	510	0.95
5	17	0.0028	0.19	12.3	0.3	1	23	518	541	518	541	0.98
6	17	0.00043	0.029	14.8	0.3	2	23	546	567	545	567	0.97
7	17	0.42	29	5.4	0.0	1	20	575	594	575	596	0.93
8	17	0.0001	0.0069	16.8	0.4	1	22	615	636	615	639	0.90
9	17	0.035	2.4	8.8	0.5	1	21	644	664	644	665	0.93
10	17	0.0017	0.12	13.0	0.4	1	23	684	709	684	709	0.97
11	17	0.01	0.71	10.5	1.6	2	23	725	747	724	747	0.93
12	17	0.00094	0.064	13.8	0.3	3	23	754	775	752	775	0.92
13	17	0.008	0.55	10.8	0.2	2	23	779	801	778	801	0.96
14	17	0.0002	0.014	15.9	2.7	1	23	807	829	807	829	0.98
15	17	0.01	0.71	10.5	0.6	1	23	833	856	833	856	0.93
16	17	0.00012	0.0085	16.5	1.0	1	23	862	885	862	885	0.97
17	17	0.00044	0.03	14.8	2.5	1	23	889	917	889	917	0.96

Sequence Information

Coding Sequence: ATGTCGGAAAATTCGAAAGTAAACAACGAAAATGGGCCTAGCTGCCTGCATTGCAGAGTGTACAATTCAAAGCAGCAATATCAAGAAATTTTCGATGAAGTGGGCATCGAAATTGAGCTCGCTGATCTTTTGGCGAAATATTTCCAAATCATTGTCAAACCCGATGCCCAAAAATCGCAATTGCTGTGCCAAGAATGCGTAAATACGCTCATACGATTCTTTGATATAGAcgagctgcagcggcagcaggatgCCGCCAATGCAGCCAAAAAGGCCGCCAAGCCGCAGGAAGAAGTATCAAGTGCTGCTAAAAAGGTGGAAAAATCCGATAAAAAGGTGACGCCGACGTTACCAAACGCAAAGAGCGTCACTGCTCCAGTCAAAAATTTGCCAAAGGCCGtaacagttgctgccactgctgtggctacaactgcagcaaagACCACTAATAAGACCTTAACCGTTCTGCCAAACCGTTCGCCCGATAAGGCCAAAGAGGTAGTTGCACGAAATGCCAAAGCCAAGGTGAAACCTAATGGCTCGGCAGATCAGGAACAAATCAGTGCACTGATACGTGACATTTTGGATGACGAGGATCCGCCGGCCGATGATAAATTTGTCGAGGCAGCAGCCACAGTGGGGCAGCTGGAAAAGCCAATTGGCAAAAAGCAGAGACAGCACGAGACAGTGGAAGAGCTGGGAGAGCTGGAGGAAGAGGATAACAATGATGAGCTGGAGTTTCTGTTGGAGCAAGATGATAACTCCTCCGATGCGGAAGTGCGCCATTTCAAAGTAGAGCGCAAAGTTAAGCGCGCCGTTTCACAATCCTTGTCCCAATCGCAGTCACAAAATGAAAGCCAAAGCGAGGATGAATCATTTAAAGTGGAGCCCTTTAATTTTGTCTTAATTAAAGAATCTGACAACATTGGCGATCTGCACGAATATCTATCGACCGTGGTCAAGACCTGCTTTGAGACCTTGCAATTCGATTGGGCCACTGTCTGCCGTCATTGTTCCCtgaaatgcaacaaatatgAAACTCTGCTCAGCCACATGCAGAAGAGCCATCAGCTGGCGGATGAGCGCTACAGTTGTCCCATTGAAGGCTGCACGGCGGAGGTGCAAGGTCGCAAATATTTGGCCATGCATCTGGTGGTGTTGCATGCACCTGTGGCAGAAATACCCATTTATGGCAAGTGTCCCGAGTGTAATATGACCTTCTCCAATATATTGCAATATAATAAACACTCCTGCGCACACGTCATTAAAAAGCGTCGTGGCATGCGCTTATACTGTGAGATGTGCGGCCTGGAGTTTCCCTCGTGGAAGCGCTTTAATTTCCacaatcaatttcatttggagCGTCACAGGCCGCGCGCTTGCTTCGTTTGCAACTTTGCGGACAACAACATTGATGAGCTGTTCCGTCATTTGTATTATGCGCACGAACCGGAGGGCACGCTCTTTTGTGATCTCTGTGATCGCAATTTTCGTGACGCTGCCGTCTTTATGGAGCACAACAAATCGCATGCGAATGTCAGCAGCACCACCTACAGCTGCTCGGAGTGCAGCGCCAACTTTGAGACACGGGGTCGTCTCAACGGTCATTTGCGCTCCGTTCATGGCAGCGTCATTAGCTGCGAGCTGTGCAGCCGCGAGTTTGCCACAGAGGCGACCTACAATCTGCATATGAAGACGCATTTGATCATTGAACGTCAGGTGCACGTGTGCAGCGGTTGCGGACTGCTCAGCGACAGTAACGCGAAGCTGCAGGCTCATGTGGAGGCGGAGGACTCGGCCTGCTTAGGCTCGGAGACCTATGCAGAACTGTTGCGCAATGCTTACGTCTGTGAATATTGCTCGGCATACTTTAAGCAGAAGAGCGATCTGCGTGCCCATCGCGATTCGGGCGTACATAAAGACGGCTTCTTCATATGCCAGCCGTGTGACAAGGCCTTTGCCGACATGAAACTCTATCGCCATCATTTGCGCAACtttcagcagcagcgcgcAGATGTATCGCATCGCAAGCTAGAGATATGTCTCTACTACATGTGTGATTATGAGGATTGCAATGAGGCCTACATTAATTGGAACTCGCTGTACACACACAAGCGACGTTCGCACGATGCCATCGCCAGACATGATCCGCTGGTCAAGGAAAACGAATGGATCTGCCAGTTCTGCCACAAGCAATATCGCTCCAAAATGTCGCTGTCGGTGCATGTGGCGCGTAGTCATAATAATAATAATGTCATATGCCCTCTATGCAAGGCCTCCTATAAGGATAACGATGCCCTGACTAAACATCACGCCTATTGGCATGAGCCCATAGAATGCAGTTTGTGCTTGAAAGTGGTTAAAAATCGTCGCAATTACGATACACACATGAATGTGGTGCATTCGAATAATAAACGCTACTCGTGCAGCGTCTGCCAAAAGGGCTTCTATCATAAAAGTGAAAAGGAGGCGCATCAGCGGCTGCATAGCCAATCGTATAGTTGCGACCAGTGCAGCTTCGTCACACGGAACAAGAAGTCGCTGTCGGTGCATGTGCTCGGCCAGCATTTCAAGCGCTTCGCCTTCGAGTGCAAGGCGTGCAACAAGCGCTTCGGACGTCGCCAGGGCCTGTCGAATCACATGCAGCGTGTGCATGGCTCCCGTTATACGTGTCACGATTTCTTCGATAGTGGATGCAGCAAATCGTTTAGCTCGACGACGCAGCTGAAATTGCATGTGCGTAAGGCGCACAATGGTAGCATTTACCTAGACGATGATACAATGAAGGGCGACGAACTGGAAGAGCTGGAGGAACATGACCAGGAGCACGAACAGGAGCAGGACCACGAGCAGGACCAGGAGCAGGAACCAGAGGAGGAGCAGGCGCAggtgcaggaggaggagcagaagGACGTAAACAGCGACGGTCCGTCGTCATCGAAGAAACGCTGTGTACGCATCAATGCGAATACACAAATCGAGTTCATTGGCAACTCGACGGCAAATAAGGAAACGGAGATGTTTGAGGAGTTGCCCGAGCCCAAGTCAAATAAGAGGAAAAGGAAACAATAA
Protein Sequence: MSENSKVNNENGPSCLHCRVYNSKQQYQEIFDEVGIEIELADLLAKYFQIIVKPDAQKSQLLCQECVNTLIRFFDIDELQRQQDAANAAKKAAKPQEEVSSAAKKVEKSDKKVTPTLPNAKSVTAPVKNLPKAVTVAATAVATTAAKTTNKTLTVLPNRSPDKAKEVVARNAKAKVKPNGSADQEQISALIRDILDDEDPPADDKFVEAAATVGQLEKPIGKKQRQHETVEELGELEEEDNNDELEFLLEQDDNSSDAEVRHFKVERKVKRAVSQSLSQSQSQNESQSEDESFKVEPFNFVLIKESDNIGDLHEYLSTVVKTCFETLQFDWATVCRHCSLKCNKYETLLSHMQKSHQLADERYSCPIEGCTAEVQGRKYLAMHLVVLHAPVAEIPIYGKCPECNMTFSNILQYNKHSCAHVIKKRRGMRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCNFADNNIDELFRHLYYAHEPEGTLFCDLCDRNFRDAAVFMEHNKSHANVSSTTYSCSECSANFETRGRLNGHLRSVHGSVISCELCSREFATEATYNLHMKTHLIIERQVHVCSGCGLLSDSNAKLQAHVEAEDSACLGSETYAELLRNAYVCEYCSAYFKQKSDLRAHRDSGVHKDGFFICQPCDKAFADMKLYRHHLRNFQQQRADVSHRKLEICLYYMCDYEDCNEAYINWNSLYTHKRRSHDAIARHDPLVKENEWICQFCHKQYRSKMSLSVHVARSHNNNNVICPLCKASYKDNDALTKHHAYWHEPIECSLCLKVVKNRRNYDTHMNVVHSNNKRYSCSVCQKGFYHKSEKEAHQRLHSQSYSCDQCSFVTRNKKSLSVHVLGQHFKRFAFECKACNKRFGRRQGLSNHMQRVHGSRYTCHDFFDSGCSKSFSSTTQLKLHVRKAHNGSIYLDDDTMKGDELEELEEHDQEHEQEQDHEQDQEQEPEEEQAQVQEEEQKDVNSDGPSSSKKRCVRINANTQIEFIGNSTANKETEMFEELPEPKSNKRKRKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00551740;
90% Identity: iTF_00549700;
80% Identity: -