Dmay003978.1
Basic Information
- Insect
- Drosophila mayaguana
- Gene Symbol
- bab2
- Assembly
- GCA_037075325.1
- Location
- JBAMCG010000040.1:11373174-11375477[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8 7.3e+03 -3.2 0.0 15 30 152 168 151 169 0.85 2 2 4.1e-10 6.2e-07 29.0 0.0 1 44 435 478 435 479 0.91
Sequence Information
- Coding Sequence
- ATGGGTGGGCCGACGCCCGTGGCCAGCAGCGAGGGTCAAACGTACTGTTTGCGCTGGAACAATCATCAGACGAATCTGGTCCAGATCCTGCACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTGGACGATGAGCAGTTCAAGGCGCATCGCGTTGTCCTTGCCGCCAATTCGCCCTACTTTCAGGCCATACTGCAGGATGTGCCGCAGGATCAGTGCAGCATCATATTGCCCGGCGTCAAGGGCTTCGAGATCGCTGCCCTGCTGCAGTACATGTACACCGGCGAGACGACGGTGACCAAGAGCCAGGAGCCAGAGATTCTGCGCACCGCCAAGGAGCTGCAGGTGAAGGGCCTCTACGACAACCTGATGAAGTTCAATCACAACGCGACGAGTGTCTCCGACGAGCGTGGACAGGGCGCACAATTCCAGAGCGGCACAGGTGCAccacttggccagcagcagcagcagcaccaccaccagatCCCacatccgcagcagcagcaccaccaccaccaccacatccagcagccgcagcactcGGCGCCCACCTCCAGCTCCTCCGGCGCACCGGGTAAGCCCCTCAacggctctggctctgcagCTGGTGGCGCCGATAGCAACTATGGCCAGCATCAGGCGCACCACAGCCAGCTGAACTCCTCCTCCGTGATCTCAACGTCCACACACATATCGCCCAGTGGCGCCATCTCGAGCAGCTGctcgccgccaccgccgccctTTGGCAGCTACCAGACTCCGTACACGAGCTTCTCCGCCTCCGGCGGTGCCATCAATCCCATCATTGCCGCTGGCGAAGCACCGCTGACGCCCACGCACACCACCCCGCATCCTGCTGCAGGCGAAGCTGGCCAATGGCCCCTCTCGCCttcagccgctgcagctgcgatGCTGAATTCGGTGTACGAGTCCGCTGCCGACATGAATCCTCTCAAGCGCAAGAAGCTGTCGGCTATTTCGAGCATGTTGCTCAATACGACACGGGACACGCCCATATTGCGCAATGTGCTGGCCCAGGCCAATCCGGCCGACTCCTCCCAGCCAaacccgctgctgctgcccggcgTCAAGCAGTCGGCCGAGAAGACCACGCCCACGCATCATCACAGCTCGAGTGCGTCCGGCGGTGCTGGCAGCCACAGCTTCAATGGCTCCGACTATGGCGGCGATAAGGAGCCGCTGTCGCCGCACACGGACCGCAGCTTCGACGAGGAGTCCGGCAGCGGCCAAACGGGCAAGAAGCCGGAATGGAAGCGCTACAAGCAATACACCCGGGCGGACATGATGTGCGCCATCCAGTGTGTGCGCGAGGGCATGAGCGCCCTCCAGGCGAGCCGCAAGTTCGGCCTGCCCAGCCGCACGCTGTACGACAAGGTGCGCAAGCTGAACATCACCACGGGCCGTGGCACCCATCGCACGCCCAAGCGCAGTCCGCCCGGCGTCGAGTCCTCGGCCGCCTTTCCCTATTCggcggcagctgcggcagccgcagcggccCACAACTATGGCCAGACGGAGCTGGAGCGCGAGCCGAAGGAACATTCGCATGgtcatggccatggccatggacATGGCCAGTCTGGCGGCCACTCGCATCACGGCATGCCGCCCACAATTCCGCACTCGGCGGCTGCGCTGCTCGACCACGCCTTCCTGCAGCAGGCGTTGGAGAACCGTGGCGGCGACATAGCCGGCCGTGAGGCACTGCACGCCATGGCCCTGGCAGCCGCCGCTCATGCGGCCGCCAATCGCATGTCCAGCAGTCCGCCCGGCTCCAACGGGCATGCGGCGCGTTCGCCCAGCCACTACGCCGAGGAGGAGAAGCACGAGGAACAGCGTCAGATCAAGCGCGAGGCCATCGAGGAGGAGCGCGATGCTGACGACGAGGACGATCACGATCAGGTGGAGGATCTCTCGCTGGCGCGCAAAGAGCGACCCGAATCGCCCTACTCCCCGGGACCGGCACGCGCCGCCTCCCCCATGGAGAGCGCCAGCGTCATCATGCACTCCAATTCAGCTTCGCTCTCGACAAACGGCAAAGAGGCGGCTGAGGCGCTAGAGCGCGAAGAGGAGCGCGATCGTGAGCGTGCGCGTGAGCGTGAGCGTGAGCGTGCGCGTGAGCGTGAGCGTGAGCGTGAGCAGCACCTGGACGAGTCCAGTGAAGCAGTCTCACCACCATCGCCATCGATGAGCAACCTGGCCCTGGGCCTGGGTCTGGGCCTCAAGCGGGAGCTGCTGGGCAGCGACGAGGCGCAGGCGCGCACCGACTGA
- Protein Sequence
- MGGPTPVASSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHNATSVSDERGQGAQFQSGTGAPLGQQQQQHHHQIPHPQQQHHHHHHIQQPQHSAPTSSSSGAPGKPLNGSGSAAGGADSNYGQHQAHHSQLNSSSVISTSTHISPSGAISSSCSPPPPPFGSYQTPYTSFSASGGAINPIIAAGEAPLTPTHTTPHPAAGEAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNTTRDTPILRNVLAQANPADSSQPNPLLLPGVKQSAEKTTPTHHHSSSASGGAGSHSFNGSDYGGDKEPLSPHTDRSFDEESGSGQTGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVESSAAFPYSAAAAAAAAAHNYGQTELEREPKEHSHGHGHGHGHGQSGGHSHHGMPPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAARSPSHYAEEEKHEEQRQIKREAIEEERDADDEDDHDQVEDLSLARKERPESPYSPGPARAASPMESASVIMHSNSASLSTNGKEAAEALEREEERDRERARERERERAREREREREQHLDESSEAVSPPSPSMSNLALGLGLGLKRELLGSDEAQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00568178;
- 90% Identity
- iTF_00540453; iTF_00551511; iTF_00551670; iTF_00473150; iTF_00472990; iTF_00554462; iTF_00554310;
- 80% Identity
- iTF_00540453;