Dmay006442.2
Basic Information
- Insect
- Drosophila mayaguana
- Gene Symbol
- bab1
- Assembly
- GCA_037075325.1
- Location
- JBAMCG010000042.1:9219474-9221831[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-17 2e-14 53.0 0.0 1 43 55 98 55 100 0.95
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCACACGCTTGGATGGGCGCAAGTGGCTCAACTTTAGCAGCAGACAGCTATCAATATCAGTTGCAGTCGATGTGGCAAAAATGCTGGAACACTAATCAAAACTTAATGCATCACATGCGGTTTCGCGAACGCGGACCACTTAAATCATGGCGGCCTGAAACGATGGCCGAAGCCATTTTCAGCGTATTAAAGGAAGGACTTTCACTATCACAAGCGGCGCGAAAATACGATATACCCTATCCGACATTTGTGCTCTACGCGAATCGGGTGCACAATATGCTCGGGCCCTCGATCGATGGTGGACCCGATTTGCGACCGAAGGGACGAGGCAGACCGCAACGCATTCTCCTGGGTATCTGGCCGGACGAGCATATCAAGGGCGTCATCAAGACGGTCGTGTTTCGCGACACTAAGGACATGAAGGAAGATAGCCTAGGCGCACATATGCCACCGTACGGTCGGCATTCGCCCGTTTTTCCCTTGCAGGACATGACGCTAAGCTATCCAGGTCAACCGGTTGGCGGAGGAGCCGCCAGCCTCAGCGCCCTCGCCTGTCCCAATGGTATGGGCAGTGGCGGCGGTCTGGGAGGCGCTGCCAGTGGTGCGGATCAACAAATGTCGCAAGAGCAAATGTCAGCGGTGGCTGCCGTTGCACACAATATACGCCAGCAGATGCAAATGGCCGCCGCAGCGCAGCATCAGCACGGGGAGGCGGGGCCGCAACCGCCCCCACCGGGTCCGCCGGGCCTGTTCAATTTACCGCCCCATTTGACGGGCGGCGCGGGACGGGCTAGCATATCGCCAGCATTGAGCAGTGGCTCAAATCCATCGCTGGGAGCACGGCATGCGCCCTCGCCCTGCGGTCCCGCCGGCCTCTTGCCGAATCTGCCGCCCAGCATGGCCGTTGCTCTGCATCGAGATCCGGCAGCGGCTGCACTGctcagtcagcagcagcagcatcatctgcagcagctgcagctccatcaacagcaacaacaacagcagcagcaacaacaacagcaacaacacgctTTACatcaacaggcagcagcagctgctgcagcggcggctgctgctgctgcagtgcagcaTCCGCACTCACATCCGCATTCGCATCACATGCAGCCACACAAATCCGGTTTCGGTGCCAGTTCcatgcagcatcagcagcaacagcaacagcaacagcagcaccagcaacagcaccaccaacaacaccagcagcaacaacagcaacagcagcagcaggacaagTCCAAGGCGAAGAGCAGTCCACCGCGTTTGCACTCGCCGCTGGCTGAGTTGGGCTTGGAGCTGGGCTACAAGCGCGACTTTTCGCCTACGCGACTCTTTGCCGAGGATCTGGCAGAGCTAGTGGGTGCCTCCTCCACCTCTACGTCTGCgtcaaccacagcagcagcgacgccagcagcgagcGGAACCGTTGGAGCAGCAGGCGTCACACCCGGTGGAGAACTGTGCGccagcagcaccggcagcGGAAGCGGCAGCTCCATCAAAGTGGAGCCCATTACGACCAGCGGCGAATAG
- Protein Sequence
- MMENSHAWMGASGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDMKEDSLGAHMPPYGRHSPVFPLQDMTLSYPGQPVGGGAASLSALACPNGMGSGGGLGGAASGADQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPQPPPPGPPGLFNLPPHLTGGAGRASISPALSSGSNPSLGARHAPSPCGPAGLLPNLPPSMAVALHRDPAAAALLSQQQQHHLQQLQLHQQQQQQQQQQQQQQHALHQQAAAAAAAAAAAAAVQHPHSHPHSHHMQPHKSGFGASSMQHQQQQQQQQQHQQQHHQQHQQQQQQQQQQDKSKAKSSPPRLHSPLAELGLELGYKRDFSPTRLFAEDLAELVGASSTSTSASTTAAATPAASGTVGAAGVTPGGELCASSTGSGSGSSIKVEPITTSGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476548;
- 90% Identity
- iTF_00544417; iTF_00476548; iTF_00545162; iTF_00509741; iTF_00546575; iTF_00493570; iTF_00551510; iTF_00568177; iTF_00573243; iTF_00532298; iTF_00572522; iTF_00502448; iTF_00599506; iTF_00516181; iTF_00559415; iTF_00472989;
- 80% Identity
- -