Basic Information

Gene Symbol
ct
Assembly
GCA_037075325.1
Location
JBAMCG010000077.1:1190507-1213469[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.7e-27 5.2e-23 80.9 0.0 3 72 721 791 719 796 0.95
2 3 5.6e-32 5.1e-28 96.9 0.0 3 77 1232 1307 1230 1309 0.96
3 3 3.5e-31 3.1e-27 94.4 0.0 3 76 1501 1575 1499 1578 0.96

Sequence Information

Coding Sequence
ATGTGGGGCTCGCCTGCCACAGGACTCGGCGGCCTGCAAGTCCTTAACATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGCGCCTTGGAACAAACTCACCTGGTACAAATCCAGAGGCTCGAAGAGCACCTGGAGGTGAAGCGACAGCACATAATGCGGCTGGAGGCCCGCTTGGATAAGCAGCAGATAAATGAGGCGCTGGCCGAGGCAACGGCATTGGCTGCCGCTGTtaatgctgctgcaacaaacaacaacaacaacaacaacattagcaacagcagcaacaacaacaacagcagcagcaacaacaacaacaacaatcacagcagccagagcagcgacaacaacaatgtcgtATTCAAGACAACTGATCTAACATCGACCCATCGACAcaacgacgatgatgacgatgacgatgccAATGATCATGATAATGAGCTGCGCGACGCCGacggcgatgatgatgacgacctGCACATGACCAatagcgagcagcagcagcagcagcagcagcagcaacattcaGCTTTAGTCAACAATCGCCACGACGATGAGCAGGACAAGGAGGATGCTGAGGAGCAGGATGCAGAAGTTTCAaatgccacagccgcagcggACAGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGACCTGAATGTGCTCAGTCCACAGTCGGCGATTGCCACGGCCGCCGCggccgccgcagccgctgcctgtGCCAACGATCCCAACAAATTCCAAGCCCTGCTACTGGAGCGGACCAAGGCCCTAGCCGCCGAGGCGCTCAAGAACGGCAGCACCGACGCCGTCAGCGATGaaatgccacaacaacaaaccgtagacgtagcaacaacagctgtagAAGAAGatgcagcaacggcagcagcagcagaaatagcagcagcagcaaccgcagccgccgccacagcagcagcagcagcagcagcagcagcagcagttgccaagCCAGATTTGAATAAAACTGGAACGAATGAGAATGAGACATTGGTCGAGGCCAATTTGCAGCCGAAAATTGAAATCTTAGACACAGACGAGGTAATAGCCGaggctcctgctccagctcaaACGCTAGAGGAACAGCTGGTCAATAGCTATTGGAGGCGTGGCTTTGAAAcgagcacagcaacagcaactgcagcgccagcaacaacagctgcagctgcaactgggAGCAAAACGCCAACAATTTATCAAAATGCCAATGtggtgcagcagcaattgctgcctccaccgccaccgccactgccgcaaccccagcagcagcagcagcaacaacaacaacagcaacaacactatcaacaacaacaacaacaacaacaacaacagcaacagcaacaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCGCACGCCTAGATGCCGCCACACACCACCAaattcagcaacagcagcagcagcagcagcaacagcaacagtcccagctgcagcagcagcaactcctgcacaacagcagcaatagcagcaacagcagcctgaCCGGCAGCGATCCGCTGAATCATCACCATCACGCACACCACCACGGCAGCATGGCGCATGGCCAACTGTTGCATACGGCACACCATTTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAACAGCACACCGAACAGCACCGCCCAGCTGGCGGCGAGCATTGCCAGCACGCTGAACGGCAACAAGTCGCTGTTGCAGGCAGCGGCCGCTGCCAatgtggctgctgccgccgttgccgttgccgaggacaacaacaacagtctgACCCCCAATGCGAATGCAGCTGTGGCCGCAGCAGCGATGGCCGCCCATGCTCAGCATGCGGCTGCTTTGGGTGCGCCCAGCTTCCTGCCCAATCTGCCCAGCCTGCCATTCCAGTTTGCGGCTGCCGCGGCCGCTGGACAGGAGGCGCGTGCACATTTTCGATTCGCAGACGCcgagctgcaactgcagccggGTGTTTCGATGGCGGGTCGATTGGGTGAGTCGCTGATACCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAATCAGGCACTCGACACGCTGCACATCTCGCGACGCGTACGCGAGCTGCTTTCCGTGCACAACATCGGCCAGCGCCTGTTCGCCAAATACATATTGGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTCAGCAAGCCAAAGCCCTGGGATAAGCTGACAGAGAAGGGTCGCGACAGCTACCGCAAAATGCATGCCTGGGCCTGCGATGATAATGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGATTCTGGACTGCCACAGTATGCTGGCCGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATCGCCTCGCACACATACTCAGCGAAGCCTCCTCCCTGATGAAGAGCAACGTGGTCGccgcccagcagcaacagcagcagcagcagcagcagcagcagcaacaacagcagcaggagcatcagCGTCGTCATGCCAGCGACGATACGCACAGCAATGATGACAGCAAATCGCCGCCACAGAGCTGCAGCTCGCCCTTCTACAAGGTAGAGCATCAgatcaaacagcagcagcagcaacagcagcagcagcagcagcaggcgcagcagcagcagcagcttcacgTCTCTGACCATGCGCAGCGCGAGCAACGTGAAGtggccgccgccgctgctgccgttgccgtgcaccagcaacagcagcaacgcgaGCAGCGCGAACAGCGCGAGGCTGTGCAAcgcgagcaacagcaacgactgcGTCACGAGGATCTCGCCCAGGACAAAATGGCGCGTCTCTACCAAGAGCTAATGGCGCGCACACCGCGCGAAGCAGCCTTCCCCAGctTTTTGCTGTCGCCGTTCTTTAGCGGCGCCGCTGGCATGCCTGGAGCAGCCGCCAATCCATTCCCCGCTGCCATGGCCGCCGATGAGAATATGCGTCACGCCTTCGAGCGTGAGATCgtgaagctgcagcagcagcagcagcagcagcaacagcaacagcagcaggcgcaggccGCCAGCTTTCCCAACTTTTCCAGTTTGAtggcactgcagcagcaggtgctgAATGGCGCGCAGGATCTGTCGCTGGCCGGCAAGGATATCAAGCTGAATGGTCAACGATCCTCACACGATCAgcacagcggcagcggcagcagctccaaGGACGGCGAACGCGGCGATGATGTTGGTGAGCGCAGCTTTCCCGCCCTGCCACATGCCCGCAAATCGGATGGCGGCAACACGCCCGCACCACCCGCACCGCCGGCCGTCAATGCAaccggcagcggcagcaatccGTTAGCCGCCGGCAGCGTCGCCAGCGTCGCCAGCGGCCATGGCAGCAACTCGGCAGCGCCCAGCCCATTGAGCAACTCGATACTGCCGCCAGCGCTGAGCAGCCAGGGCGAGGAGTTCGCAGCCACAGCGAGTCCACTGCAGCGCATGGCCTCCATTACCAATTCGCTGATCACACAGCCGCCGGTGACACCGCACCActcgcagccgcagcggccCACTAAGGCGGTGCTGCCGCCTATCACACAGCAGCAGTTCGACATGTTCAACAACCTGAACACGGAGGACATTGTGCGGCGCGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGACTGTTCGGCGAATCGGTGCTGGGCCTGTCGCAGGGCTCCGTCTCGGATCTGCTGGCCCGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCCGTGAGCCGTTCATACGCATGAAGATGTTTCTGGAGGACGAGAATGCGGTCCACAAGCTAGTGGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGCCCGCAGATGCCCCAGGGCCTGGCCAACAAGATGCAGGCAACGCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCAGCCCAGGCCCAGCACATCATGCAACAGATGCAGGCAGCGGCCGCCATGTCCGCggccatgcagcagcagcaggcagcggccGCTCAAGCGGCTGCCGTGCagcaggcccaggcccaggctcAGGCCCAGGCACAGCAgagccaccagcagcaggccCAACAGCAGGCCCAGCAGCAGGCCCAACAGCTGCTCCATCATCAGAATATGCTGTTGACATCGCCCGGTCTGCCGCCCCAGCATGCCATCAGCTTGCCCGCGGCGAACACGCCCAGTGGCCAGGCGGGCGGCAATCCGGCGTCTGTGGCCACGCCCGGCAGCAACGAGAAGAAGCCGATGATGATGCCCGTGCACGGTGGGGCGCATGCTCCGAATGCCATGCGCAGCCTGCACCAGCACATGTCGCCGACTGTCTATGAGATGGCCGCGCTGACCCAGGATCTGGACACGCACGATATAACCACCAAGATCAAGGAGGCGCTGCTCGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTGGGCCTGTCGCAGGGCTCCGTGTCGGAGCTGCTGAGTAAACCGAAGCCCTGGCACATGCTCTCCATCAAGGGGCGCGAGCCCTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAATGTGGAGCGCCTGCAGCTGCTAAAGAATGAGCGCCGGGAGGCGAGCAAACGGCGTCGCAGCACCGGGCCCAATCAGcaggacaacagcagcgacacgTCCAGTAATGATACAAACGATTTCTATACGAGCAGTCCGGGTCCCGGCTCGGTGGGTTCGTCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGCGTGCTCTTCTCCGaggagcagaaggaggcgCTGCGCCTGGCCTTCGCCCTCGATCCGTATCCGAATGTGGGCACCATTGAGTTTCTGGCCAACGAGCTAAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAACCATCGCATGCGGCTCAAGCAGCAGGTGCCGCACGGCCAGCCCGGCCAGGACAATCCCATACCCAGTCGGGAGAACACCAATGCCACACCCTTCGATCCCGTCCAGTTCCGcatcctgctgcagcagcggctcgTCGAGCTGCACAAGGAGCGCATGGGCCTGAGCGGTGCGCCCATACCCTATCCACCGTActttgccgccgccgctcTGCTCGGCCGTAGCTTGGCGGGCATTCCAGGCGCTGCCGCGGCtgctggtgcagcagcagctgcagccgccgccgtcgGCGCCGCTGGCGGCGATGAGCTGCAGGCGCTCAATCAGGCCTTCAAGGAGCAGATGAGCGGACTGGATCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGACGAGCTGGACCTGGACGCCAGTGGCCAGAATATAAGCGACAACGAGTCCATCGAGGGTGGCCAGGAGCCCGAGAACAGCACACCCATATCCGAGTACGAGAAGGCGCTGCAGAAATCGGCGCTCGCCTCGGCCGCCGCTGGCTACTTGAACAATGCGGTGCGCAGTTCGCGCCGCAAGCCTGCCGCCCCACAGTGGGTCAATCCGGCTGGCGCCAGTACGCCCACAGCGACGGGCGGCGCGGGCGCCCCAATCGCAGCCGGCGATAACAGCGGCAGCGAGCGCATCATCAACGGCGTCTGCATTATGCAGGCCTCCGACTATGGACGCGACGAGAGCGACAGCGTCAAGGGCGGCGAGTCCAATGCCGATGCGGAGCACGATGATCATGCGCACCTGGAGATCGAGCAGCGCTTCATGGAGCCAGAGGTGCACATCaagcaggaggaggatgacgacgatgaGCCGAcctcccagcagcagcagcagcagctggacgaTGAGAGCGCCGAGAAGCAGCTGAAGGTGATCAACGAGGAGAAGCTGCGCATGGTGCGCGTGCGACGGCTGAGCAGCAATGGTGATGGCGACGAGCATTGCGCTGCagtgcagcaggcagcggcagcagcagcagcagcagcagcagcagttgcagcggcagcaactgcgacgccagcagcagcggcagcagcgtgGAACTACTAA
Protein Sequence
MWGSPATGLGGLQVLNIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNISNSSNNNNSSSNNNNNNHSSQSSDNNNVVFKTTDLTSTHRHNDDDDDDDANDHDNELRDADGDDDDDLHMTNSEQQQQQQQQQHSALVNNRHDDEQDKEDAEEQDAEVSNATAAADSNELKIKKEQHSPLDLNVLSPQSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGSTDAVSDEMPQQQTVDVATTAVEEDAATAAAAEIAAAATAAAATAAAAAAAAAAVAKPDLNKTGTNENETLVEANLQPKIEILDTDEVIAEAPAPAQTLEEQLVNSYWRRGFETSTATATAAPATTAAAATGSKTPTIYQNANVVQQQLLPPPPPPLPQPQQQQQQQQQQQQHYQQQQQQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSARLDAATHHQIQQQQQQQQQQQQSQLQQQQLLHNSSNSSNSSLTGSDPLNHHHHAHHHGSMAHGQLLHTAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSNVVAAQQQQQQQQQQQQQQQQQEHQRRHASDDTHSNDDSKSPPQSCSSPFYKVEHQIKQQQQQQQQQQQQAQQQQQLHVSDHAQREQREVAAAAAAVAVHQQQQQREQREQREAVQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLLSPFFSGAAGMPGAAANPFPAAMAADENMRHAFEREIVKLQQQQQQQQQQQQQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSHDQHSGSGSSSKDGERGDDVGERSFPALPHARKSDGGNTPAPPAPPAVNATGSGSNPLAAGSVASVASGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAQAAAVQQAQAQAQAQAQQSHQQQAQQQAQQQAQQLLHHQNMLLTSPGLPPQHAISLPAANTPSGQAGGNPASVATPGSNEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELDLDASGQNISDNESIEGGQEPENSTPISEYEKALQKSALASAAAGYLNNAVRSSRRKPAAPQWVNPAGASTPTATGGAGAPIAAGDNSGSERIINGVCIMQASDYGRDESDSVKGGESNADAEHDDHAHLEIEQRFMEPEVHIKQEEDDDDEPTSQQQQQQLDDESAEKQLKVINEEKLRMVRVRRLSSNGDGDEHCAAVQQAAAAAAAAAAAVAAAATATPAAAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00495757;
90% Identity
iTF_00476522;
80% Identity
iTF_00540265;