Basic Information

Gene Symbol
Arid2
Assembly
GCA_037075325.1
Location
JBAMCG010000040.1:768121-773693[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-24 2.6e-21 75.8 0.0 2 89 84 170 83 170 0.93
2 2 5.2 1e+04 -3.0 0.0 27 65 1625 1665 1614 1676 0.73

Sequence Information

Coding Sequence
ATGACGTCCATTGATAGCGTACGCGTGCTGCTTCAGTCTCTGCCAGCAGcatcgcctgctgctgccaacaacaacaacacgcagCAAAATGAGTCGACGCCGGCAAAACTTGGCGCTGCGGGAACCCCTTTGCGCGCGAGAAatatacagcaacaacagctacaagcccaacagcaattaatttttggaaCGCCCGAAAAGTCACAAGCTGGAGAAGCACCTGGAGCTGAAGAACAGCAGCTGAGTGCTCCGGACGAATTCTGGCGTGATTTGCATCAGTTCCATGAGCGGCGCGGCACCCCACTGACGCAGGCGGCCAAGATCAGTGGCCAACATGTGGACTTGTATCGACTGTATCAGGAGGTTACGGAACGCGGTGGCTTCAATAAGGTTAACATGCGCGACGAATGGGACGAGGTGTACAGCGCGCTGGATACGCTGCGGGATCGTTGTGTGAACGGCACCGCTGGTATTAAGCATATCTATCGCCGCTACCTGGATAAATACGAGCGCCTCAACTTTCTGGGTGAGGATCCGGACAAACTGGAAGCCTTGGAGGCGGCCATCGAGTGTGTGGAACTGGGCACCAGTGCCAGTCGAGTGCGCTCACGCGCCCTGGCCGGCGGGGCCATTGGCGGTGCAGGCGGCAGCTTGACGGGCGGTGGCTTGGGAAGCATCTTTGGCATGGCCCACTCCACGCTGACGGCCGTGCCCATGGCTTACAACCAGCGTCAGCACATGGTGAATGCGGATCGCCGTCGCCAGTACAAAATGTCCACACAGCTGCATAAGCACAGCAGCTAcgagaagctgctgctgtctctcttATCGCCGCTGCCCAACGAGCAGGACTTTGCCATCAATGTGTGCACTCTGATGGCCAACGAGCCACGCTCCACTTTGCAGCTGACCGAGTGCCCCAAGCTCCTGGACGTCCTGCTCGCTCACCTTGGTGTCTATGCGGACTACAGCATGCGTCAGCTTTTCCAGCATGGCCACAACAATAGGGGCACGCTGGTGAGGAAGCACTCAAAGCTGAATTTCTGGCGGGATTTGTTGTACGACAAGCCCCAAATACTGGACCTGTATACGGATGAGCAGGCCTGGCGGGACAACGGTCTGATCAGCAAGGACAGCGACCCCTTCGACGACTCTCTGTTCCAGTCCGATGAGCTCGACTTCGAGCTGGACTTTCTGAATCTGCGCCGCAGCCACGGCACAGACGAACGCATTGGCCAGCGCGTGCTACAAATTGTGCAGCTGTTGAGGAGCTTGAGCTTTCATCAGGAGAATGTCACGCTGCTTGCGTCCAATCGCACGCTCTGGCGATATCTGGTCATGGGCGCCAATGTGCGGTGGAGCAACATCCACATTCAGGCCTTGGAGACGGCCGGGAATCTAGCGCAGCAGTTCGAGTTACTGGATCCCGCCACAGACGAGCTGTCGAGGAATTTGCTGGCCACGCTGTGCGAGGGCGTCGATTCGAATGACCGTGCCGTGATAATCAGCTGTCTGGAGATCCTCTACAAGCTGTGCGGACGCGAGGGCAATGCACAGCATATAAATCGCTGTCTCGGCCTGGACTTCTATCATCGtgtgatgctgttgctgtcgctgacCGACGTGATGCTGCTCATCTTCACCCTGGAGACGATTTACGCGTTGAGCACGTTAGGCGCTCGTCCATGCTCCATGCTGATGCAGGTCCGCGGGCTGTTGGATCAGTTGGTTAGTCTGCTAACTGTGGAGGCGCAGTCGTACGGCGCTGCGGGCTGCATATTAATGCGGGTGGTTGAGGTGGTGCCGGGCAACATATTGTCCACAATGTCTCAAAACATGCCCAGCACTCAGATGACGCCGCTGATGACGGTGAAGCAGTCGCAATCGCAAACGCAGCCGCCAGCGCCGATTCCATCGCTGCCTCCGCCGGCACCCACACAGGTGCAGGTGCTGCCCCCACCGCCGGAGACCGTTTCGTTGCCTGTGGCAGCGCCTGCGCCTCCGCCTgcgccagctcctgctcctgctcctgcaacTGTAGCTGCTCCTGTTGCCATACCTGCGCCTATGTCCCTGCCCATGCCCAGCCTGCCCCAAGTGCAGCTGCCGGTGCCCAGTCTGCCGCAGGTGCAGCTTCCGCCTCCACCTACCCTGCAAGCACAGGCTCCTGCTGCGCCAGCACCTGTAGCAGCCACTACAATAGCGCTTCCCGCTGCGCCATCTGCACCGCAGAGCTTCACCCATGACGACGAGACGTATGCGCTGGCCTGGCTAGGCGCAACTTACGAGCGGGCTGGCAACGGACACGATTATCGCGTGGAGCAACAGGAGCTATACACCATTTACCTGTCGCACTGCCAGAAGGCGGGCAAGCATTCGGTGGTCAACCGGGTGCAGTTTCCGCGACTCGTGCGCCTCATCTTCAATGCAACCGTCGGACCCGCCATCGTGCGGCAGATGGATGGAACGGAACTTCCTGGCACACACTATGTGGGCATAAGGATGCGTGCACAGCCCTTGCCcatgcagcatcagcatcagcatcagcagcaaccgcagcaaccgcagcaacagcagcagcagcagcagctgcaacagcagaaagTTTCAGCAGTACCTGCCGCAATAGCTGCTAAGAAGGAAGGAACTCTGGCGCCCAActcCTCGCTGATTAAGAGTCTGCTGGCGAACAAAGTCAACGAGCGACAGCTGAAGCAAAAGGCTCAGGCGCAGCCGCCTGCTCTGGTGGCTACCACTGCATCCTCGACTGGCTCGCCGGCCGGACAGCCCATCAAAGTGACCTCCACGGCAATCAGCGCGTTCGTCAATAATCCGCTGATGCAGCACACGCCCGTGAAGGTGGGCCAAACCACTATAAAGCCACTGCATCCGCAGCTGCCCATGGAGAAGAAGCCAATGACGGACTCGGCGCCCCCGCCGCTTGCCCCACTTAGTGGCTCCAACGTGTTGACAAAGGACACGCAAGGGCGCACAGTAATAATACAGTCCAAGCGGAAGCTCACCATCGATGAGGAGCAGAACAAACGGCTGGCCTTGGACGGCAGCAGCGCGCCCGCTGGGAAGGATGACCCGCAGGTGACGCCCTCCAAGAATGCGGCTAATCTCTATGCAGACTTGGCTGCCTCTATACTTGAGGATGAGGATCTGGATGATGTGCCGCCGCTGGCCGCCTCCAGTAAAGAGCAACAGCCagcgccacagcaacaacaacagcagccgcagcagcaacagcaacagcaacagcaacagcagcatcagcagcagcaacaattgcagctaatCTCAAAGGTGCACCCGACCCAGCGGCAGCTCATCTTTCCCGCTGGCAATGCGccggcgccgccgccgcagttGAAGCTGGCCACGACGGCAACAATCAAGACGGACCAGGGCCTGCAGACGGTGCCGGTCATACTGCAGCAGAAGacggaacagcagcagcagcagccgacgcAGACGCAGTACGTGCTGGCCACCAATCAGCAGGGTCAGACTTACTTGGTGGCCCAGCAGTCGGCGCCAGTGGCAGCCTCGCCCAGTGCGCCCGGCACGCCCACTCTGTTGGTTACCCagacgccgcagcagcaaacgaAGACGATCATCATACTGCAACAGCCGCCGGGCGTGAGTGCTAGCAATGCGCCCGGCACACAGAAGGTCATCATGACGACAGCACAGGGGCAGCAGGTGCTGGTGACGACCACCACGGCTCCTGCGGCTGCGGTGCGTCCTGCCACTCAggttcagcagcagcaacagcagcagcagcaaatcttTATAAATCCACAGCGTGCAGTGTCTGCCGCATTGGGTGCGGGCCAGATGTCGCCCTCGCTGCTCTCACAGCTGAATCAGATTCCTGCCACCATAAAGTTACATCAGCCACAGCCGGCGCAGGCGGCGCAGCTACATCGGTCCGGCATAGTAGCCAGCAAGGCGGCGCCCATacctcagctgcagcagcatcagtccATTATACAGCAGCACATCATCTCGAGTCCCGCAGCCGGCGCGGACAAGCGACAGCTGCTCCTGGGCGGCATCAAGGAAACGACGCTCATCACCCAGACGCCCGCAACGGCTGCCCCACTGCAGCAGAGCCAGCTCAATTCGCAGACAATCATAACTACTCAACCACCGGTGGGGGCCACATCAGTCGTGGGCgctgcactgcagcagcaacagcagcacattCGCAACgtgctggagcagcagcagcagcatcatcccTCCATCATACAGCAGAAGATAACGATGCCCATGGCGCTTACGGATGCGGCCAAAGTGAAGCCTACTCAGGCAATACCCATTGCCAAAAAGCCAATGCCGCCGCCCACGCCAGCGACAGCTCCTGCACAGCAGCATCCTGTGCAAATGCCAGTGCTGAAGCCCACTCAGCAGGCGCAGCTGGAGAAGCCGACATTAATGGTTGAGTCGAAGCCAGCGGAGCAACCAGCAGtcacagctgcaacagttgccagTCAGTTGccgtcagcagcagcgggaaCAGTTGTtgccacagcaactgcagcaggagcaactgcTGCGACTACGAGTGCTGTGACCAATGCTAATCCCTCAGCCGCTCCAGCTGTGAACACTGTGAATGCTGTGAATGCGGCGAGTGCTGTAAGCGCTGTGCCCGTGGATGTGAATTGGCTGTTCATTTGCGATTGGCGCAACTGTCCGCGTCGCAAGTTCAAATCGCTCAATGAACTGCAGCATCACGTCTGCAATGTACATTGTCCAGACCACTTGGACCCGGGCGCCGAGATCTATTGCCAGTGGGGCAGTGGCCCCAGCCTGTGCGACAACATTGCGCGCAAGCGCTACTCGCTGATGACGCATCTCGTCGACCGTCACTTGGCGTTGGACGACTTGCGAGCCAGTGTGCAGCGTCGCCTGGCCACGGGCATCCACAATGTCTCGCCCGCTCAGCCAACGGTTACCATAGTGCGCAATGTGGGCAGTGCCAACGCGCCGGCAGCGGCAtcggcagctgctccagctacTGCAGCCACTGCTGTGGGAACCTCTGCCCTGCAGGCGATCAAGCGTCACTCGGCTGACTTTCTCAACTCGAAGGAACTGATGGACGAGAACGAGGGCCCAGTCACAAAGAGCATACGGCTCACGGCTGCGCTGATCCTGCGGAATCTTGTCAACTACTCATTGACGGCCAAGCGGAGCTTGAAGCGCTACGAGCCGCATCTGGCCAATGTGGCCTTCAGCAATGTGGAGGCCAGTGGCGTTCTATCCCACATACTGCACGAGCTGAGCCAGTag
Protein Sequence
MTSIDSVRVLLQSLPAASPAAANNNNTQQNESTPAKLGAAGTPLRARNIQQQQLQAQQQLIFGTPEKSQAGEAPGAEEQQLSAPDEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAAIECVELGTSASRVRSRALAGGAIGGAGGSLTGGGLGSIFGMAHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYEKLLLSLLSPLPNEQDFAINVCTLMANEPRSTLQLTECPKLLDVLLAHLGVYADYSMRQLFQHGHNNRGTLVRKHSKLNFWRDLLYDKPQILDLYTDEQAWRDNGLISKDSDPFDDSLFQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQENVTLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFELLDPATDELSRNLLATLCEGVDSNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYHRVMLLLSLTDVMLLIFTLETIYALSTLGARPCSMLMQVRGLLDQLVSLLTVEAQSYGAAGCILMRVVEVVPGNILSTMSQNMPSTQMTPLMTVKQSQSQTQPPAPIPSLPPPAPTQVQVLPPPPETVSLPVAAPAPPPAPAPAPAPATVAAPVAIPAPMSLPMPSLPQVQLPVPSLPQVQLPPPPTLQAQAPAAPAPVAATTIALPAAPSAPQSFTHDDETYALAWLGATYERAGNGHDYRVEQQELYTIYLSHCQKAGKHSVVNRVQFPRLVRLIFNATVGPAIVRQMDGTELPGTHYVGIRMRAQPLPMQHQHQHQQQPQQPQQQQQQQQLQQQKVSAVPAAIAAKKEGTLAPNSSLIKSLLANKVNERQLKQKAQAQPPALVATTASSTGSPAGQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLPMEKKPMTDSAPPPLAPLSGSNVLTKDTQGRTVIIQSKRKLTIDEEQNKRLALDGSSAPAGKDDPQVTPSKNAANLYADLAASILEDEDLDDVPPLAASSKEQQPAPQQQQQQPQQQQQQQQQQQHQQQQQLQLISKVHPTQRQLIFPAGNAPAPPPQLKLATTATIKTDQGLQTVPVILQQKTEQQQQQPTQTQYVLATNQQGQTYLVAQQSAPVAASPSAPGTPTLLVTQTPQQQTKTIIILQQPPGVSASNAPGTQKVIMTTAQGQQVLVTTTTAPAAAVRPATQVQQQQQQQQQIFINPQRAVSAALGAGQMSPSLLSQLNQIPATIKLHQPQPAQAAQLHRSGIVASKAAPIPQLQQHQSIIQQHIISSPAAGADKRQLLLGGIKETTLITQTPATAAPLQQSQLNSQTIITTQPPVGATSVVGAALQQQQQHIRNVLEQQQQHHPSIIQQKITMPMALTDAAKVKPTQAIPIAKKPMPPPTPATAPAQQHPVQMPVLKPTQQAQLEKPTLMVESKPAEQPAVTAATVASQLPSAAAGTVVATATAAGATAATTSAVTNANPSAAPAVNTVNAVNAASAVSAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDPGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVSPAQPTVTIVRNVGSANAPAAASAAAPATAATAVGTSALQAIKRHSADFLNSKELMDENEGPVTKSIRLTAALILRNLVNYSLTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00493429;
90% Identity
iTF_00554180;
80% Identity
-