Basic Information

Gene Symbol
grh
Assembly
GCA_037075325.1
Location
JBAMCG010000040.1:14242190-14274972[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.24 2.2e+03 -2.3 5.3 77 110 218 258 156 301 0.58
2 3 0.56 5.1e+03 -3.5 2.8 96 125 531 541 502 558 0.50
3 3 2.2e-63 2e-59 200.6 0.4 24 221 670 862 656 864 0.94

Sequence Information

Coding Sequence
ATGATGCaggatgccagcagcagctatgcCATATCCTATACAGACTGGATAGCCGAGTCACGacgcagcagctacagccTAGACgcacagcatcaacagcatcaacagcagcagcagcagcagcacctccatcatcaacagcagcaactgcagcaactgcagcaacatttgCCACAACATCTACCTCAGCATCATTATGGCAGCCATTCCCCATCGCGTTACTATGAGCCGTccaagcaggagcagcagcagcagcagcagctgcaacacctGCCGCTCACTGCCGCTGGGCTAATGCAATCGGTGGCAGATGAGATACAATTGagcgaacagcagcaggcaacacCGCCGcccccagcaacagcaacagttgcagcagccagCGATGCTGCAGTTCCCCATGCTGCCgcctcctccacctcctcctATGCTGTCTACAGCTACTACAGAGATGTCGATGCTGAGCAGCGCAATAGCAGatcacaacagcagcagcagcagcagcaacaacagcaacttgtGTGGAGCAATGCGAGCAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTAtcgcaaaatgaaattcaaggCTTTCTGCTTGGTTCACACCCCTCATCGTCGTCCGCCACAACCGGCGTTGTctccacaacaacaatctcgcatcaacaacagcaacaacagcagcagcaacaacaacaacaacaacagcagcaacagcagcatcaacagcagcagcagcagcagccgcctcaTCCCAGCGACATTGTGACCATAACCACGGCAGGAGTGGGGAGCGCGGGCTCGATCGTCTCcgctgcagtgcagcagcaacaacagcagcagcagcaacagcaacagcagcagctgctgagcaTCAAACGTGAGCCCGAAGACTTGAGCAAGGATCCAGCCAAGAATGGCAGCTTGGGCGGCTCAGCGAACGGTTCAGTAATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAAGTGAAGCAAGTGGggaaactgcaactgcaactgcattcGATATAGCCAATAAAtcggcaacagctacagcagccacagcagcagcaacaacagcaacagcaacagcaacatcaacaactgcaactgcaactagtCCCGCCAGAGCGACAGCAGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCAATGGAACCAGCACACAGCAGAGCACATTGCAAGCCCAGAGTCCCAGTCCGGGTCCATATATCACAACGGATAGCTATGGCATGTACACGACGACACGATTGCCACCTGGACCGCCACCTGCCACCACATTCATAACGGAGCCCTACTATCGTGAATACTTCGCACCCGATGGCCAGGGCGGCTACGTGCCAGCGGGCACAGCGCGCAGCCTCTACGGCGAGGATGTTTCCGTATCGGCGGCCGCCCAGCCCCAGCCAGTGGGCGGTGTCTATGAGGCGCGCTTTAGCAGCAATGCGCCCACTACCACCACAGTGCTAACCAGCAGCAATGCACACCACCAcagtcagcaacagcaacagcaacagcagcagcagcagcagcaacaacagcagcaacagcaacagcagcaacaacaacaggaacagtCGGGCAAGAACGGTGGGACGCCGCTCTATGCCAAGGCTATAACGGCGGCGGGTCTCACCGTGGACCTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAAAATCACATACAGCAgTCCTTCGACTATACGGAACTGTGTCAGCCGGGCACCCTCATCGATGCCAATGGCAGCATACCCGTTTCAGTGAATAGCATACAGCAGCGCACCGTGGTCCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGATACGAGCACAAATGGCTCGACACGTTCGAGGCCCTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTACCATCTGGAGAGCCCGATCAGCTCGTCGCAGCGTCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAGGACGAGATAAAGGCCTGGCAATTCTGGCATAGTCGCCAGCATTCCGTGAAGCAGAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAGAGCTCAGCCAAGATCAACATTGCGGTTCAGTGCCTCAGCACGGACTTTAGCAGTCAGAAAGGTGTTAAGGGCCTGCCGCTGCACGTACAAATCGATACGTTCGAGGATCCACGCGATGCGACGGTCTTTCATCGCGGTTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGTAAGACGCGCGATGAGGAACGGCGCGCGGCCAAGCGCAAAATGACAGCAACCGGACGCAAGAAGCTGGACGAGCTCTACCATCCGGTGACAGATCGCTCCGAATTCTATGGCATGCAGGATCTGGCCAAGCCGCCGGTGCTCTTCTCGCCCGCGGAGGACATGGAAAAGAGCTTCTATGGCCATGAGACTGACTCGCCGGAATTGAAGGGTGCTTCGCCTTTTCTGTTGCACGGCCAGAAggtggccacgcccacgctcaAATTCCACAATCATTTTCCGCCCGACATGCAGACtgaTAAAAAGGATCACATATTGGATCAGAGTATGTTAACCAGCACGCCGATGTCCGACTTTGGGCCACCCATGAAACGGGGCCGCATGACGCCGCCCACCACGGAGCGCGTCATGTTGTATGTGCGGCAGGAGAACGAGGAGGTCTACACGCCGTTGCATGTGGTGCCGCCCACGACGATTGGCCTGCTCAATGCGattgaaaacaaatacaaaatctcAACAACGagcataaataacatatatcgCACAAATAAGAAAGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAACGAGGACATCTTCCTGCTGGAAGTGCAACAGATCGAGGACGATCTGTACGATGTGACGCTCACAGAGCTGCCCAATCAGTAG
Protein Sequence
MMQDASSSYAISYTDWIAESRRSSYSLDAQHQQHQQQQQQQHLHHQQQQLQQLQQHLPQHLPQHHYGSHSPSRYYEPSKQEQQQQQQLQHLPLTAAGLMQSVADEIQLSEQQQATPPPPATATVAAASDAAVPHAAASSTSSYAVYSYYRDVDAEQRNSRSQQQQQQQQQQQLVWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSSATTGVVSTTTISHQQQQQQQQQQQQQQQQQQQHQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQQQQLLSIKREPEDLSKDPAKNGSLGGSANGSVITQKILRVDAARSEASGETATATAFDIANKSATATAATAAATTATATATSTTATATSPARATADLEMYATTGGTQIYLQTSHQNSNGTSTQQSTLQAQSPSPGPYITTDSYGMYTTTRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVSAAAQPQPVGGVYEARFSSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQQQQQEQSGKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00544231;
80% Identity
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