Basic Information

Insect: Drosophila malerkotliana
Gene Symbol: -
Assembly: GCA_018153235.1
Location: JAECXV010000198.1:4330323-4332536[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.6 1.9e+02 2.7 5.7 1 23 85 108 85 108 0.91

2 10 4.6e-06 0.00034 20.7 0.6 1 23 293 315 293 315 0.99

3 10 5.7e-07 4.2e-05 23.6 2.0 1 23 321 343 321 343 0.99

4 10 1.4e-08 1e-06 28.7 0.5 1 23 349 371 349 371 0.99

5 10 4.4e-05 0.0032 17.7 3.5 1 23 377 399 377 399 0.98

6 10 8.5e-05 0.0062 16.8 0.0 1 23 406 428 406 428 0.98

7 10 2.2e-05 0.0016 18.6 0.2 1 23 434 456 434 456 0.98

8 10 5.2e-08 3.8e-06 26.9 0.7 1 23 462 484 462 484 0.98

9 10 8.5e-08 6.2e-06 26.2 2.8 1 23 490 512 490 512 0.99

10 10 4e-08 2.9e-06 27.3 0.1 1 23 518 540 518 540 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.6	1.9e+02	2.7	5.7	1	23	85	108	85	108	0.91
2	10	4.6e-06	0.00034	20.7	0.6	1	23	293	315	293	315	0.99
3	10	5.7e-07	4.2e-05	23.6	2.0	1	23	321	343	321	343	0.99
4	10	1.4e-08	1e-06	28.7	0.5	1	23	349	371	349	371	0.99
5	10	4.4e-05	0.0032	17.7	3.5	1	23	377	399	377	399	0.98
6	10	8.5e-05	0.0062	16.8	0.0	1	23	406	428	406	428	0.98
7	10	2.2e-05	0.0016	18.6	0.2	1	23	434	456	434	456	0.98
8	10	5.2e-08	3.8e-06	26.9	0.7	1	23	462	484	462	484	0.98
9	10	8.5e-08	6.2e-06	26.2	2.8	1	23	490	512	490	512	0.99
10	10	4e-08	2.9e-06	27.3	0.1	1	23	518	540	518	540	0.97

Sequence Information

Coding Sequence: ATGGCCGTGCAGCTGACACAGAGCTACCATCACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTTACCTTTCACTGCATGTGCTGTTCGGAGTTCTTTGTCCACCCGTTGGCACTCTACCAGCACATGAATACCTTTCACCCGAACGAGGGTACCAATGGAGTTCAGGTAGAAAAAGAGCCGGAGGCGGATGGCCAGGAGGACGAGGACTACAGCTGGATATTCGAACCTGTGTGCGAGCTAGCAGAAGATGGTAGCTCTTCTTCGGATGAAAACGACAGCAGCGATGATGACAGCGACTCCTCTGATGACTCTTCGGACGACGACAGCAGCAGCTCCAGTTCCAGCTCCAGCAGCTCAAGCTCATCCAGCAGCTCCACGCCAACCTCCAATAGCAACTCAAACACACAGCAGAGTCAGGAGTGGGTGCAGCCCATGAGAGGATTAATTCAAGGGCCTAACCCAAACGAGGTTTTCCTTCAAACGGCCGATCCACGGGAATCCACTTCCATAATCCTACTGCAGCCTGACATGAACACTCCACAGATGGGAGTCCCAGAATCACTCATACAATCGCTGGGAGGAGGTTTCGCCCTGGCACCCTCCGCCCCTATCAAGCGACGGCGAGGACGACGCAGCAAGGCCAATGTCCCGGTCCTCGATCCTGCCACTGATCCCGCAGCCCAGAAGTGCTTTCAGTGCTCGCATTGCGAAGCGAGCTTCCCCAACGCCGGTGATCTGTCCAAGCACGTGCGCTCCCACATCACCAACAAACCGTTCCAGTGCTCCATCTGCCAGAAAACTTTTACGCACATCGGCAGCCTGAACACGCACATTCGGATCCACAGCGGCGAGAAGCCTTATAAGTGCGAGCTCTGCCCGAAAGCCTTTACCCAATCAAGTAGCCTGATGGTGCACATGCGCTCCCACACGGTTAAGAAGCCGCACCAGTGCCTGTTGTGTGACAAAGGCTTCGTCAACCATAGCTCACTGCTGCTCCACCAGAAGACGCATGCCGAGCCGACGGAGACGTTTGTCTGTCCGGAGTGCGAGCGGGAGTTCAAGGCGGAGGCGCTTCTGGACGAGCACATGCGTATGCACACCCAGGAGCTAGTCTACCAGTGTGCCATTTGCCGCGAGGCCTTCCGCGCCAGCTCCGAGCTGGTTCAGCACATGAAGAACCACCTGGGCGAGAAGCCCTTTACCTGCTCCTTGTGCGATCGTTCCTTTACCCAGTCCGGCAGCCTCAACATTCACATGCGCATCCACACCGGCGAGAAACCGTTCCAGTGCAAGCTGTGCGACAAGTGCTTCACCCAGGCCTCCAGTCTCAGTGTTCACATGAAGATCCATGCCGGCGAGAAGCCATACCCGTGCCCCATCTGCGGAAAGTCGTACAGCCAGCAGGCGTACCTCAACAAGCACATTCAGGCCCATCAGGCATCGGCAGCTAGAGCTGCCCCTCCAGAAATCCCATCCATCCCCCAGCAGCCACATGAGACGCTGGTTTGCATTGTCTGTGGATCGCTGCACGCGGATGCTACGGCTCTGTCGCATCATGTAATCACCCAGCATGCCGCCCTCCTGGACACCATGAAGCAACAACCACCCGAAGGTGGATTTATGACCGGCGTACAGGAGCAAGAGGCCTATATGCAGCGTGTCCAGTCGGTGTTCCAGGAGATGAATCAGCAGCCACCACAGCAGCCCAATCAGCAGCAGCAGCCAGTCACTCCACCCCAACCAGCCATTGACTCCACAGGCGAGGATGAAGAGGAGCCGGAGGATGACGGCGATGAGAGAGAAACCCCCGCGGAAGATGCGGATGAGGAGGTGGAGGAGGAGCTAGATGATGAAAAGCCCATGAGCGATGACCTGGAACCGTTTCTCGGAGTGCAGGAAGAAGCCATTCTCATGGACTCGGACATCTACTACGACGACTTTGCTGACATGGACGTGGGCTGTCAGGAGGAAGTGTGCGGCGATTATGTTTTGAACGAGGAGGAAGTTTGCACCGAAGAGCTCATCTAG
Protein Sequence: MAVQLTQSYHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTFHCMCCSEFFVHPLALYQHMNTFHPNEGTNGVQVEKEPEADGQEDEDYSWIFEPVCELAEDGSSSSDENDSSDDDSDSSDDSSDDDSSSSSSSSSSSSSSSSSTPTSNSNSNTQQSQEWVQPMRGLIQGPNPNEVFLQTADPRESTSIILLQPDMNTPQMGVPESLIQSLGGGFALAPSAPIKRRRGRRSKANVPVLDPATDPAAQKCFQCSHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHTVKKPHQCLLCDKGFVNHSSLLLHQKTHAEPTETFVCPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHLGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQASAARAAPPEIPSIPQQPHETLVCIVCGSLHADATALSHHVITQHAALLDTMKQQPPEGGFMTGVQEQEAYMQRVQSVFQEMNQQPPQQPNQQQQPVTPPQPAIDSTGEDEEEPEDDGDERETPAEDADEEVEEELDDEKPMSDDLEPFLGVQEEAILMDSDIYYDDFADMDVGCQEEVCGDYVLNEEEVCTEELI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00580104;
90% Identity: iTF_00566221;
80% Identity: -