Basic Information

Gene Symbol
Hr38
Assembly
GCA_035045305.1
Location
JAWNPD010000452.1:831485-835600[+]

Transcription Factor Domain

TF Family
ESR
Domain
zf-C4|ESR-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
This entry represents CLAVATA3/ESR (CLE)-related protein 14 from Arabidopsis thaliana (CLE14) and similar proteins predominantly found in plants. CLE14 is an extracellular signal peptide that regulates cell fate. It represses root apical meristem maintenance and functions as an elicitor of the root meristem differentiation through the CLV2/CRN complex signalling pathway. This protein inhibits irreversibly root growth by reducing cell division rates in the root apical meristem [1, 2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0029 27 4.3 0.6 11 71 58 107 42 180 0.43
2 4 0.15 1.4e+03 -1.3 2.0 14 33 209 228 193 242 0.51
3 4 0.029 2.7e+02 1.1 5.1 17 38 388 409 377 455 0.45
4 4 4.5e-39 4.2e-35 121.8 0.0 2 268 619 884 618 888 0.86

Sequence Information

Coding Sequence
ATGTTACTTTTGCAACCCAATAGCTCCTTTAGTTCACTCTCGTCGTTCGACAATTTTTCAACGCAAACCgtgacagcgacaacaacaacgtcggcagcagcagcagcagccgcagctgagAGTAGTGCtggacatcatcatcatcatcatcatcatcaccatcaccgCCATcaccaacatcaacatcagcagcaacagcaacctcagcaacatcatcagcagcaacacttgCTGCTGCCCACATCCAGCCAGGACACATTGCTGTCCCATGAGGAGGATCAGCTGATCAGCAATCTGGCCGATGCCGCCGTCACGCACAGCGAACTCTTCTCGGATCTATTCTTTCCGTCGGACTCGAACAACTCACTGCTCTCGCCGGCACTGGAGCAATCGGTTGCCAGCTATCCGGATACACAGGTTGAGGTGCCCTCCACAGCCAATGAGAACTTAATTGGCAGCAGCGAGGACATCACCAGCTCCATTGAGAATCTCACCAAGCTCACCTGTCTGCGCGATAAGCGACTCTCCTCCATACAAGACCAGCCGTCGGCCGAGCAGGATCATCACTCCATCTGTCTGCTCAGCCTGCGCTCCAGCAGTGATCCCGCTATAGCACTCCAcgctcagcaacaacagcagcaacagcaacagcagcagcaacagcagcagcaacaattgcaggcAGCACATTTGCAGCGTCACGGCGCCAGCGATTTACTGATCTCACCCATTGGCGGGCCGCTATCCTGCGGCAGCAGTCTGCCCAGTTTCCAGGAGACCTACTCCCTCAAatataacagcagcagcggcagcagtccAACGCCCCCAATGCAGACCACGCCCTCCGATCAGATACTGACGCTGAAAATGGATGATGATTGTTTTCCCGAAGTGTTGGCTAGCCTGGGTGCAGGTCCTGCCACAGGACAGCTGCAGTCGCTGCATCAATTGCACCAATCCTCCACACACCTGTCTTCACAttccaacaacagcaacactaacaacagcagcaacaacaatagtggTGCCTACAACTATCAAGGACATTTCAATGCCATCAATGGCGTTTCCAAATTCTCGCCCAGCTCATCCGCTAGTTCCCTCTATGAGTACAGTGCTCAAAATGAGCTATTCtataaccaacaacaacaacaacaacagcagcagcagcagcagcaacaacaacagcagcaacagcagcagcagcaacaacagcagcagcaacaaggcTATCAGCAACATAACTACAACTCGCACAATGGTGAGCGTTATTCCTTGCCCACATTTCCCAGCATTACCGAGCTAGAGGCAGCCAATGCCCCAAATACTGCACCCACCTCCAGTTCCGTTATGGTCTCGCTGCCGCCCATGCGTCGCGCCTCGTTGCCCGTGCAGCGTTCCGTTTCACCCGCCGCCAATGCCGTCGGAGCTACCTCCGCGCACAGTCCCAAGCTGGCCAAGCTGACACTGAATCCAAggcatgcccatgcccatgcccatgcccatgtcCATGTGCTGCAGGCCCAGCTGAGTTCAACGCCCAATTCGGCAGCCAGCTCCCCGGTGAACGGTGGTGCTGGTGTGGATCTGCTCCACAGCCAATCCTCCCGCCTTCTGCAGTCCACAAGCACCTCGCAGCTATGCGCCGTCTGCGGTGATACGGCCGCCTGTCAGCACTATGGTGTGAGAACCTGTGAGGGTTGCAAGGGTTTCTTCAAGCGTACGGTGCAGAAGGGTTCCAAGTATGTGTGCTTGGCGGACAAGAGCTGTCCGGTGGATAAGCGACGGCGTAATCGCTGTCAGTTCTGTCGCTTTCAAAAGTGTTTGGTGGTGGGCATGGTCAAGGAGGTGGTGCGCACGGACTCGCTAAAGGGACGCCGCGGACGACTCCCCTCCAAGCCCAAGTCGCCGCAAGAGTCACCGCCATCGCCACCCATTTCATTGATTACGGCACTGGTGCGTAGTCATGTGGATACAACACCGGATCCCTCGTGCCTGGACTACACACACTACGAGGAGGCAGCTGATCCGCTCACTCCACCGATTGGAGCCAGCGGACTGGGCTTGAGCGAGGCGGATAAGGTGCAGCAATTCTATCAGCTGCTGACCAACTCGGTGGACGTGATCAGGCAGTTTGCCGAGAAGATTCCCGGCTATCTGGATCTAACGCACGATGATCAGGAGCTCCTCTTTCAATCCGCATCCCTAGAGCTCTTCGTCCTGCGGCTCTCTTATCGCGCTCGCAGCGACGACACGAAGATGATCTTCTGCAATGGCACGGTCCTGCATCGCAACCAGTGCCAGAGATCCTTTGGTGACTGGCTGAATGGCATCATGGAGTTCAGTCGCAGTCTGCACAATCTGGAGATTGACATATCGGCCTTTGCCTGCCTTTGTGCTCTCACCCTCATAACAGAGCGTCATGGATTGCGAGAGCCGAAAAaggtggagcagctgcagatgAAGATCATTGGTAGCCTGCGGGATCATGTCACCTACAATGCGGAGGCGCAGAGGAAGCAGCATTATTTCAGTCGCTTGCTAGGCAAATTGCCCGAGCTGAGGTCCTTGAGCGTGCAGGGACTGCAGCGGATATTCTATTTGAAATTGGAGGACCTGGTGCCGGCACCGGCACTGATTGAGAACATGTTTGTCACCACGTTGCCCTTTTAG
Protein Sequence
MLLLQPNSSFSSLSSFDNFSTQTVTATTTTSAAAAAAAAESSAGHHHHHHHHHHHRHHQHQHQQQQQPQQHHQQQHLLLPTSSQDTLLSHEEDQLISNLADAAVTHSELFSDLFFPSDSNNSLLSPALEQSVASYPDTQVEVPSTANENLIGSSEDITSSIENLTKLTCLRDKRLSSIQDQPSAEQDHHSICLLSLRSSSDPAIALHAQQQQQQQQQQQQQQQQQLQAAHLQRHGASDLLISPIGGPLSCGSSLPSFQETYSLKYNSSSGSSPTPPMQTTPSDQILTLKMDDDCFPEVLASLGAGPATGQLQSLHQLHQSSTHLSSHSNNSNTNNSSNNNSGAYNYQGHFNAINGVSKFSPSSSASSLYEYSAQNELFYNQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGYQQHNYNSHNGERYSLPTFPSITELEAANAPNTAPTSSSVMVSLPPMRRASLPVQRSVSPAANAVGATSAHSPKLAKLTLNPRHAHAHAHAHVHVLQAQLSSTPNSAASSPVNGGAGVDLLHSQSSRLLQSTSTSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKSCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPDPSCLDYTHYEEAADPLTPPIGASGLGLSEADKVQQFYQLLTNSVDVIRQFAEKIPGYLDLTHDDQELLFQSASLELFVLRLSYRARSDDTKMIFCNGTVLHRNQCQRSFGDWLNGIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQRKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01326417;
90% Identity
iTF_00538275;
80% Identity
iTF_00538275;