Basic Information

Gene Symbol
Camta1
Assembly
GCA_035045305.1
Location
JAWNPD010000387.1:15177826-15205789[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.2e+04 -4.0 3.9 59 80 159 180 124 234 0.55
2 3 1.6e-48 9.8e-45 151.1 2.2 2 116 300 412 299 412 0.98
3 3 3 1.9e+04 -7.0 6.4 51 104 632 686 575 689 0.51

Sequence Information

Coding Sequence
atggccGGTTATCGTGCGCTTCCGCTGGCGCCCGTGTCGGCAACGGCAGCTACCGCAGTGcagccgagcagcagcagcgggcatCCAGGTCCTACAATGGCGGCGTATGCTCATCATCAGTCGATGACGGCGATGTCGAATAATGGTATTATCTATCAGTCGGCGGTACACGCCTCCATACACAGCTTGAATACAGTACAAAGCCAGCATCGCTCATCCACCACGCATCATCAAATTCTAGccacggcaacggcagcagcagcggcagcagcagcagcagcagcaacagctgccgtAGCAGCTGCACTACcaacgccaacaacagcagcagcagcagcagcagcggtgggGGTGGTGCCgccgacggcagcagcagcgacttatggacagcagcaacatatgcatcagcaacagcaacagctgcagtcaacacatcagcaacagcaacagctgcagtcaacacatcagcagcagcaacaacagcagcaacagcaacaacagcagcagcagcaacagcagcagcagcaacagcagcaacatcttaTGCTGCATCAGCAAcacgcacagcaacaacagcaacaacagcaattgctgccacatgcacagcaacaacaacatgtgtctgcacagcagcaacatcatctacagcagcaacaacaacatttaggTCTGTCGCCCGCgctgcaccaccaccaccatcatcatcaccaccaccagcagctgTCGCTGCATCAGAACCACCTGTACTTCAATGGCTTGGGTCACCAcagccatcatcatcatcgacagATCTTTAGCCATCTACAGAGCGCCCTCTTGCCGCTCAGTGTCAATGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTCCCATCGCAGCGCCATCGTTGGAATACAAATGAGGAAATCGCTGCGATTCTTATCAGCTTTGATAAACATAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCGAAGAGCGGCTCCCTGCTGCTCTACTCACGCAAGAAGGTGCGATATAGGCGCGACGGCTACTGCTGGAAGAAGCGCAAGGATGGAAAGACGACCCGTGAGGATCACATGAAACTTAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTGCTGCAGaatCCGGACATTGTTTTGGTGCACTATCTGAATGTGCCATATCCGGATGATAATAAAATGGCCGTGATTGCGCCAAGCATAACGCTTTGGGGCGACAAGAAGGAGTGGACCAAAGAGGAGCTGGTTAGCCAGTTAAAGCCTATGCTCTCCACGGTGAATTCGGATGAGGACTCCGACTCGGGCAATGATATCGAGATATCAACGGCTGAAACCGTGGAGTCGATTGTCTGCCAGCTGATGGAGAAGCAGCGTTTGTCGCGTCAAGCAGCTCTTGTTAAGCAGCTGGATTGTGGCTGCGGGGAGGCGACGTGTGCCGATGGAAAAACCTGTACGCATCCCGTCATGCGACGCACGGGCGGTATACTGAAGTCCGTTTCGGACAAGCGGCCCAATGATGCGTATAGCACCGCGAATGGCACGCCCAATGTCGTCGTGGCGAGCAAGCTATATTCCCGGTGGTCGGAGCGGAATCGACAGCGGGAGGCGGTTTTACATCTGGACAATCCGCAAGCGCAGTTTCACAATGTTACGCAACAGTTGCCGCAGGAGTCGGCgatcaaatttcaaatcattccgcagcagcagcaacagcagcctcaACAGCAGcctcaacagcagccgcaacagcagcaacaacagcaggccaATCACAGCGATGGCAACTatcagcagcaatatcaaatGATTGCCACGAGAAGCAATCTGAtaatacagcagcagcaacaacaatatcagcaacagcagcagcaacagcaacttttGAACTTGCAGCGCTTTcagcatgcGAACACTGGCAGCcaaagtcagcagcagcagcagcaacagcagcaccggcaacattattataaattgcaacaggcagcaaccccaaacagcagcaaccaaccCCCAGTTGAGGCCATGTGCATGTCACCTGAGCATCACAGTAGcgggggcagcagcagcagcagcagcaagaacaacaacaacaacaatcagctcacagcaacatcagcagtaGTAGCAACGTCTTCCGCTAGCACCACTCCTTCCACGTCGGCAACATCATCCACCTCGAGTTCCTTACAGTCGATTATCGATggcaatcagcagcaacaaattacaacgacaacagcaacaacagtagcagcagcagcagcaacttgtgATAATTTAATGAGCACCAATGCGCTTGCTGAGCAGGAGGTGGGCAGcagtgagcagcagcagcaggcgtcAAGAAactatagcaacaacagcgtcaACAATCAGGCCCAGGACAAGGCCCAAATCCTTAATGGTTGTGCAAACTACAGTGCTTCCAGTGATAACAGTAGCCAAATTAGCGCCAGCGATGAAAGCAGCAGCTTTGGCGCCAACAACAatcccaacagcagcagcagcagcaacaacgacgatGAACAACCCCAAGCGGAATCCATGAGTTTTTTTAACGAGACGCTCGATCTTTCACACGAGGATATAGAGCGCACGCTTATAGCCAACATgccatacaacaacaacaacaacagccatggagcaggaacaacaacagcaacaacaacgacagcggcaacagatagcagcagcaacaacaacagtgaagCAATTGCcacgcagcaacaacaacaatcgcacAGCGTGGAGGAGGCGGAGGGTGAAGATGACGACACAGCTGATGTGTTTGCCAATCTGGATGCATTCGACATGCTGGTTGAGTTTCCGGAACTCGATCTTGATGACAAACAGGCGCTGAACAACACGGCACTGCAGCAGGTGCAAAGTCATGGACACAGCTCATCCTATCTAGCCGAAGCCACGCAATCGCAACTGCAGTCACAGCCAACGCAGACGCAGCGCAAGTTGCTGAATATTTGCGACTTCAGTCCAGAATGGTCGTATACCGAGGGCGGCGTCAAGGTGCTCGTCGCTGGTCCCTGGACGAGCAATGGCGGCTGCTACACGGTTCTCTTTGATGCCCACCCTGTGCCCACGGTCCTAGTGCAGGAGGGCGTTCTCCGCTGTTATTGTCCCGCCCATGAGGCGGGCCTGGTAACTCTCCAGGTCGCATGCGACGGGTTTTTGGTCTCCAATTCGGCCATGTTTGAGTACAAGTTATCGTTGCTTGCGGATGCTCCCTTTGATGCGAGCAGCTCTAACGATTGCCTATACAAGTTCACGCTGCTCAATCGTCTCTCCACTATCGATGAGAAACTGCAGGTCAAGGTGGAGAATGAGCTAATGACCGATCAAACATCCCTTTATCTAGAGCCCAACTTTGAGGAGAAGCTGGTCGTCTACTGCCACAGGCTGACGAAGCACGCTTGGAGCACGCCCAGCACTGGTGCAAATTGGAGCGTTGGCTTGCGTGGCATGACGCTGTTGCATTTGGCTGCCGCTTTGGGCTATGCCAAACTGGTGGGCGCAATGCTCAACTGGCGTACCGAGAACCCGCATATCATACTCGAAACGGAGCTGGACGCGCTCAGTCAGGATGTGCACGGCTTCACGCCGCTCGCCTGGGCCTGTGTGCGTGGACACTTGGAGTGCACACTGCTACTGTACAAGTGGAATCACAACGCACTTAAGATCAAGACGCAAGCCCAGCACACTCCCCTCGATCTGGCGAGCCTGAAGTGCCACAAGCAGCTACTACAGCAGCTCTGCCGCCTGGAAAAGGAGCGCTGTCGCAAGCCACAGCCACGTGGCGGTCTAGCTAATCTCTCCATGAATTTAGGCGTTGAGGCTGCTACAGAAGAGTCGGCCTATAGTGCGTTCGAGCTGGAACTGCAGCGCAGACATGATGGAGTCTTTCTGCGACCTGTGGCGCTGCACAGCAACCAAAGTCCGCCTAATAATAGCAGCCGCTATTCGAAGCGCTCCTCAATTGACAGCGGCATCAACATGGACATACGCAGCAAATCCGGCAAGCCACTGGCCCGACTGCATGGTAACTTTGAGTCGCACGACAACTATGCGTCAAGCGTGGATTCTCCACTGGACTCGCTCACAGGCGCCAACTGCTCGGGATTGTTGTCGCCGTTGCGCAAGATGGACTTTGCATTGTGCGAGGTATCCACGGGCGAGTCAAGTCCCATTCACGACAAAGACATCGATTGCGATGAGAATTCGACGAGCGTGACTGACGCAACCCTAAACAATGAGCTCAACGATGCTGTCGTAGGGGATTCGGATGCAAAGGTCCTCACACTAGCGGAACACATTATAGCCGCGATGCCGGAGCGTATTAAGAATGAAGCGGACGAGATGATGGTGCTGGGCAGTCCACTAACGGAGCCGCTGACATCGGAGTCTTCGGCATTGACTGACAGCTTCATGGATCCGCTGCTCGACTCGCTGCCGAATGCGAATTTCGACAATGATTTCAGTTTTGACTTTCATGATCACAATTATCGGTATCACGATGTCAGCACGCCCTGCTCTAGCCTGAGTCCCGCCAGTTCCGGACCACTACAGTCGCCGGCCAGTTATTCCATACTGGGCACCGATCCCTCAGTTAGCTCACCCAGTCCGCCGCCTTCGACCAAACAGCTGACAGAGTTTCTGCACGCCTCCAGCATATCGCAGTATCCTTTCGAGGCGGACTTCTCCAAGCTAACGCTTACGGACACGGAGCAGCGGGAGCTATACGAGGCGGCTAAGTGCATACAGAAAGCATATCGCTCGTATAAGGGACGCCAGAAAATGGAGGAGCAGAACAAGGAGCGCACCGCAGCGATTGTCATACAGAACTACTATCGTCGCTACAAGCAGTACGCCTACTACAGGCAGATGACCAACGCGGCGCTGGTTATCCAACACGGATATCGCTCGTATCGGCGCAATAAGCGCTTCAAGAAATCCCAGCATACGCTCAGTGGCATCGGTTCATGCAGCGAGCATGGCAGCGTTAGCAACAATTCTCAGTGCCTGTCCAGCTTCTATGATCACTACAAGCAggatcaacaacagcagcatgaGCTCAACTCACAGCCCAGCACACCCAAGGAGACCAGTCCCTCGGGTCCTTTGAAGCGTACATACTCCCAGTCTACACAAAATCAGGCTGCCAGAAAAATACAACAGTTCATGAGACAATCACGCATCAAActacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTTTCAAGGGCAGCAGGAAATGTCAGTATGCCATAGTGAAAATAGcaacaacaacaacaacaacaatctgcAATACATGCAACCCAATCAATGA
Protein Sequence
MAGYRALPLAPVSATAATAVQPSSSSGHPGPTMAAYAHHQSMTAMSNNGIIYQSAVHASIHSLNTVQSQHRSSTTHHQILATATAAAAAAAAAAATAAVAAALPTPTTAAAAAAAVGVVPPTAAAATYGQQQHMHQQQQQLQSTHQQQQQLQSTHQQQQQQQQQQQQQQQQQQQQQQQQHLMLHQQHAQQQQQQQQLLPHAQQQQHVSAQQQHHLQQQQQHLGLSPALHHHHHHHHHHQQLSLHQNHLYFNGLGHHSHHHHRQIFSHLQSALLPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGEATCADGKTCTHPVMRRTGGILKSVSDKRPNDAYSTANGTPNVVVASKLYSRWSERNRQREAVLHLDNPQAQFHNVTQQLPQESAIKFQIIPQQQQQQPQQQPQQQPQQQQQQQANHSDGNYQQQYQMIATRSNLIIQQQQQQYQQQQQQQQLLNLQRFQHANTGSQSQQQQQQQQHRQHYYKLQQAATPNSSNQPPVEAMCMSPEHHSSGGSSSSSSKNNNNNNQLTATSAVVATSSASTTPSTSATSSTSSSLQSIIDGNQQQQITTTTATTVAAAAATCDNLMSTNALAEQEVGSSEQQQQASRNYSNNSVNNQAQDKAQILNGCANYSASSDNSSQISASDESSSFGANNNPNSSSSSNNDDEQPQAESMSFFNETLDLSHEDIERTLIANMPYNNNNNSHGAGTTTATTTTAATDSSSNNNSEAIATQQQQQSHSVEEAEGEDDDTADVFANLDAFDMLVEFPELDLDDKQALNNTALQQVQSHGHSSSYLAEATQSQLQSQPTQTQRKLLNICDFSPEWSYTEGGVKVLVAGPWTSNGGCYTVLFDAHPVPTVLVQEGVLRCYCPAHEAGLVTLQVACDGFLVSNSAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQVKVENELMTDQTSLYLEPNFEEKLVVYCHRLTKHAWSTPSTGANWSVGLRGMTLLHLAAALGYAKLVGAMLNWRTENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQAQHTPLDLASLKCHKQLLQQLCRLEKERCRKPQPRGGLANLSMNLGVEAATEESAYSAFELELQRRHDGVFLRPVALHSNQSPPNNSSRYSKRSSIDSGINMDIRSKSGKPLARLHGNFESHDNYASSVDSPLDSLTGANCSGLLSPLRKMDFALCEVSTGESSPIHDKDIDCDENSTSVTDATLNNELNDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNANFDNDFSFDFHDHNYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKMEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQHTLSGIGSCSEHGSVSNNSQCLSSFYDHYKQDQQQQHELNSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQFQGQQEMSVCHSENSNNNNNNNLQYMQPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01327876;
90% Identity
-
80% Identity
-