Basic Information

Gene Symbol
-
Assembly
GCA_035045305.1
Location
JAWNPD010000649.1:28416-30892[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2 2.2e+03 -1.1 0.0 3 18 148 163 146 164 0.89
2 5 9.7e-14 1.1e-10 41.5 0.0 1 38 219 257 219 261 0.97
3 5 0.00027 0.3 11.3 0.0 2 44 275 321 274 323 0.83
4 5 4.1e-06 0.0045 17.1 0.0 2 46 330 375 329 375 0.90
5 5 3.7e-11 4.1e-08 33.3 0.1 3 45 383 426 381 427 0.95

Sequence Information

Coding Sequence
ATGTGCGATGTGAACAATCTGAAGCTGACtcaacaacaactgttgcaGGAAATAGCATCGCTGCAACTTGCCAGCGTCGTTCAAAGCGATACAAACGCTTTGAAACTGAATCTTGAGATTCAGCGACAGCTGGAACAGTTGCGCCTACGTATGCTAGAGCTGCTTCAGGTGGTACGAGCACGTTATAAGCGCAACGAGCAGATACTGATAAACCGACAGAAAAGGCAGTCTCGCATCCCAGAAGGCtctgcagcagcaccagctggCAAAGATGAAAAAGTTGGGATTAGTGGGGCGGTGCTTCGCGGTGGAACGTTTCTGTTTAAAggtaatttgtattttcgcGATGTGGACGGACGGAGTTGTCCCAACAATGAGGACTACGACaggcgctgcagcagcgaaATGTTTCCCACCGATTTTGATATGCGCTCCAAGCACGTCTGGACGGCTAGGGACAAGAAAAACATCATAATGGGCGTTAAGCAGCAGCTGTTGGATCATGCCGCCTACCCGATCACCGGCAGTCAGACGCGCAAACGCAAGATCATCGATCTGCATATGCAATCATTATGCACACTGGATCTCGATCATCGACATTCAGCCTATAGTTGTGAGGCCATGTGGCTAGTGTATTTGCAGCCGCAGCTCAGGCGCGACGATTGGACTCCCGAAGAGGATGCGAAGCTGCTAGATGCGATAAAGACCCACAAGCTGCAAGATTGGCAAGCCATTGCTGCTAAGATGGATCGGCGTTCCGACTATCAATGCTTTGTGCGTATGCAGATAAGTTTGCGCTTTCATCTGGAACCAACAAGCTCCATGAAATGGAGCTATCAAGATAGCGAGCGATTGCGGGCAGTTGTTCTGCAAAATACGGTGAATGGCCTTATTAATTGGTCGCAGGTTGTTGATCACTTTCCGAACAGATCACGCTCCACATTAATTGGACGCTATTGTTATGTCCTGCATCCCAGCATCAGTCACGAGCCTTTCACCCAGCGAGAGGATGTTATGCTGTTTGCTGCCGTTGAGGAATACGATGGCAAGTTTAACTGCTTTCCTCGCACACTGTTTCCTAATCGCTCGCTGGCCCAGCTGCGCACTCGCTATCAGAATGTGCTGGCACAGCGCAATAAAACTGACTCGTGGTCGGAGATGGATGACAAAAAACTGATTGATTTTGTTACAAAGAACGGCGCATCGCACTGGGTGAACTGTGCTAATCATTTGGGCAATCACACGCGTACCAGCTGTCGCACTCGGTTTCTGACCATCAAGCGTTTTCTGCAGCTGCGTCCGGATGCATCGGTGGCTGATATGCCACGTcgcaagaaaaccaaaaatgcTCCAGTCACTGCCGAGAACTGGGAGCAACGCTTGCAGGAATGGCAAGAGGATCCCGACTCACTCCTCAGCAATCCGCAAAATCCGTCAAAGCCGCAAAAACTGCCAAAGCCGAAAGTAAAGAGATACACAAACGTCATTGACAGCAATATGGAACCATTGCGCGGTTTGGACGTGCACATCTATGAGTACTTCAAGTATGCCTATAATCTCAAATTGCACTCGCCAGCGGCACCAATGCCGCTGCCCCGGGACGAGCGTAATCTACACGCAGTGGTGCATGCGCTGCGCTTCCGGCCATCTGCACATAACTTCAAGCAGGTGCAAAGCATTTATCTGTCCAAGCAGCTGAGTCGCACCTACAACAAAATGATGCGCCAATTGCCGGCGTGCGGGGAAAGTGAACAATCCCCGCAACTGCTGCCGCCCAACTGGTCCACAATGATGGGCTTTCGGTCCATATGCATATTGTCCGTGCATTGTCGTAATCGTAATGGGTTCAATCCGAAAATCAGTTGTGATGAATCTCAGCCAGCGGTTCAGCTTTTCCGGGAACGTTTACGCACGCTATTCTATCGCACAACGCTGTTGAGCCGCCTGGAGACAACGGTGTTTGAGACGCTGCCAGCGGCATTGATGCAACTGCCACGTCCAACTGTAAATTACGGCCGGACAGAGATATCGCAGCAGCCAGCATTGCCCGCGCCCAATTATAGCGACCTGAAACCCGAAGACACTTCTTACCATCTAAAATCTGAGCCAGCTGACTTCAAAGATGAACCTAACGTTATGGAGGAGTTGTCCTTCGAATAG
Protein Sequence
MCDVNNLKLTQQQLLQEIASLQLASVVQSDTNALKLNLEIQRQLEQLRLRMLELLQVVRARYKRNEQILINRQKRQSRIPEGSAAAPAGKDEKVGISGAVLRGGTFLFKGNLYFRDVDGRSCPNNEDYDRRCSSEMFPTDFDMRSKHVWTARDKKNIIMGVKQQLLDHAAYPITGSQTRKRKIIDLHMQSLCTLDLDHRHSAYSCEAMWLVYLQPQLRRDDWTPEEDAKLLDAIKTHKLQDWQAIAAKMDRRSDYQCFVRMQISLRFHLEPTSSMKWSYQDSERLRAVVLQNTVNGLINWSQVVDHFPNRSRSTLIGRYCYVLHPSISHEPFTQREDVMLFAAVEEYDGKFNCFPRTLFPNRSLAQLRTRYQNVLAQRNKTDSWSEMDDKKLIDFVTKNGASHWVNCANHLGNHTRTSCRTRFLTIKRFLQLRPDASVADMPRRKKTKNAPVTAENWEQRLQEWQEDPDSLLSNPQNPSKPQKLPKPKVKRYTNVIDSNMEPLRGLDVHIYEYFKYAYNLKLHSPAAPMPLPRDERNLHAVVHALRFRPSAHNFKQVQSIYLSKQLSRTYNKMMRQLPACGESEQSPQLLPPNWSTMMGFRSICILSVHCRNRNGFNPKISCDESQPAVQLFRERLRTLFYRTTLLSRLETTVFETLPAALMQLPRPTVNYGRTEISQQPALPAPNYSDLKPEDTSYHLKSEPADFKDEPNVMEELSFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-