Dmac007740.1
Basic Information
- Insect
- Drosophila maculinotata
- Gene Symbol
- bab2
- Assembly
- GCA_035045305.1
- Location
- JAWNPD010000387.1:4612703-4614946[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-10 1.4e-06 28.0 0.0 1 42 439 480 439 483 0.88
Sequence Information
- Coding Sequence
- ATGGGTGGCCCAACGCCAGCGTCGGGTAGCGGTGAGGGGCAAACATATTGCCTGCGCTGGAACAATCATCAGACGAACCTCGTCCAGATACTGAGCGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTTGTCGTCGACGATGAACAGTTCCAGGCACATCGCGTTGTCCTGGCGGCCAATTCGCCGTACTTTCAGGCCATACTGCAGGATGTGGCGCAGGATCAGTGCAGCATCATATTGCCGGGCGTGAAGGGATTCGAAATTGCCGCGCTGCTGCAGTACATGTACACGGGTGAGACGACGGTGACGAAGAGCCAGGAGCCGGAGATACTGCGCACCGCCAAGGAGCTGCAGGTGAAGGGTCTCTATGACAATCTCATGAAGTTCAATCACAAGCCGGCGAGCAGCTCGATCAGCGAGGAGCGCCCACAGAATCATCAGTTCCAGGGCAGCACCACTGGGCAGCAgctccaccagcagcagcagcagcagcagcagcagcaccagcaccaacaccaTCATCACTCCGCGCCcacctccagcagcagctccagcaatAAGCCACCTAATGGCGCCGGCCAGGATGTTGGCTATCATCATGGCCATCATGGCCAGCACAATTCCTCCTCCGTGATCTCAACGTCCACACACATCTCGCCCAGCGCCGCCATCTCGAGCAGCTGCTCGCCACCACCGCCCCCCTTTGGCACGTATCAGACGCCCTATCCCAGTTTCCCCGCCAGCGTCTCCAGCGGTGGGCCCATCAACATGAACTCCCATATTTCGGCTGGTGAGGCACCACTGACACCCACCCATGCGCCATCacatgctgctgccgccgccggcgAGTCGGTGGCCGGTGGTCAGTGGCCGCTCTCCCCCTCcgccgcagcggcagcgatgCTTAATTCCGTGTACGAGTCGGCAGCGGATATGAATCCTCTGAAGCGCAAGAAGCTATCGGCCATCTCGAGCATGTTGCTCAACAGCACACGGGATACGCCCATCTTGCGTAATGTGCTCGCCCAAGCGAATCCGGCGGACTCCTCGCAGCCcaaccagctgctgctgcccaagAATCCCGCCGAGAAGACGCCCACCCATCAGcattcccattcccactcCCATCCCCATCCGcatggcggcagcggcagtggcagcgctGCCGGCGCCGGCAGTCACAGTTTCAATGGCTCCGACTACGGTGGCGATAAGGAGCCGCTATCCCCGCACACGGATCGCTCCTTTGACGAGGAGACGGGCGGTGCCGGCGGCAAGAAGCCGGAATGGAAGCGCTACAAGCAGTACACCCGTGCCGACATGATGTGCGCGATTCAGTGCGTCCGCGAGGGCATGAGTGCCCTGCAGGCCAGCCGCAAGTTCGGACTGCCCAGTCGCACCCTGTATGATAAGGTGCGCAAGCTGAACATCAACACTGGACGCGGCACACATCGCACACCCAAGCGGAGTCCACCTGGTGTGGGCGTCGAATCCTCCGCTGCCTTTCCCTATTCcgctgcagcggctgctgccgccgccgctcaCAACTACGGCCAGACGGAGCTGGAGCGTGAGCCCAAGGAGCATGGCTCCGTGCATGGCCATCATGGCATGCCGCCCACCATTCCCCACTCGGCGGCCGCCCTCCTCGATCATGCCTTCCTGCAGCAGGCGCTCGAGAATCGCGGCGGCGACATTGCCGGCCGGGAGGCGCTCCATGCCATGGcactggcagcagcggcgcatGCGGCAGCCAACCGCATGTCCAGCAGTCCGCCTGGATCCAATGGCCATGCGGCACGTTCGCCCAGCCACTATGGTGAGCAGGACGCACTGGAGAAGCAGGAACTGGAGCATCCACACTCGCGCATGATTAAGCGGGAGGCCATCGAGGATGAGCGCGATGcggatgatgaggatgatcaCGATCAGGTGGAGGATCTGTCGCTGTCACGCAAGGAGCGACCAGAGTCGCCCTACTCCCCACCACCGCCACGTGCCGCCTCACCCATGGAAAGCGCCAGCGTCATCATGCACTCCAATTCCGCCTCGGCGTCCACAAATGGCAAGGAGCCGCacgagccggagccggagccggaggaGGAGCGGCTGCAAGACTACCGCGCGGTGGCTTCACCAGCGtccccacccccaccacccATCCAATCTTTAGCCCTGGCTTTGGGTCAGAAGCGCGAGCTGCTGGGCAGCGAGGATGCACAGGCTCACACCGACTGA
- Protein Sequence
- MGGPTPASGSGEGQTYCLRWNNHQTNLVQILSALHEVGSYVDCTLVVDDEQFQAHRVVLAANSPYFQAILQDVAQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKPASSSISEERPQNHQFQGSTTGQQLHQQQQQQQQQHQHQHHHHSAPTSSSSSSNKPPNGAGQDVGYHHGHHGQHNSSSVISTSTHISPSAAISSSCSPPPPPFGTYQTPYPSFPASVSSGGPINMNSHISAGEAPLTPTHAPSHAAAAAGESVAGGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQPNQLLLPKNPAEKTPTHQHSHSHSHPHPHGGSGSGSAAGAGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGAGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNINTGRGTHRTPKRSPPGVGVESSAAFPYSAAAAAAAAAHNYGQTELEREPKEHGSVHGHHGMPPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAARSPSHYGEQDALEKQELEHPHSRMIKREAIEDERDADDEDDHDQVEDLSLSRKERPESPYSPPPPRAASPMESASVIMHSNSASASTNGKEPHEPEPEPEEERLQDYRAVASPASPPPPPIQSLALALGQKRELLGSEDAQAHTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802934;
- 90% Identity
- iTF_00538310;
- 80% Identity
- iTF_00538310;