Dmac011250.1
Basic Information
- Insect
- Drosophila maculinotata
- Gene Symbol
- bab1
- Assembly
- GCA_035045305.1
- Location
- JAWNPD010000549.1:91357-93925[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 2e-14 53.1 0.0 1 43 55 98 55 100 0.95 2 2 1.9 3.6e+03 -2.1 0.4 12 21 211 221 210 232 0.65
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCACGCTTGGATGGGCGCCACTGGCTCCACGCTAGCAGCAGACAGCTACCAATATCAGTTGCAGTCAATGTGGCAAAAATGCTGGAACACCAATCAGAATCTTATGCATCACATGAGATTTCGGGAGCGCGGTCCCCTCAAATCCTGGCGACCCGAGACAATGGCCGAGGCCATTTTCAGTGTGCTGAAGGAAGGACTCTCTTTATCGCAGGCTGCCCGCAAATATGACATACCATATCCGACTTTCGTCCTGTATGCGAATCGGGTGCATAATATGCTGGGTCCTTCCATCGATGGCGGCCCTGACTTGCGGCCCAAAGGACGCGGACGACCGCAGCGCATACTGCTGGGCATCTGGCCAGATGAGCATATTAAGGGAGTTATCAAAACTGTCGTTTTTCGCGATAACAAGGACATGAAGGACGACAGCATGGGATCCCATATGCCACCATACGGTCGGCATTCGCCCGTGTTTCCTTTGCAGGACATGACGTTGAGCTATCCAGGCGCTAGTCCCGTCATGCCGGGCAGCGGCGCCGCCAGTCTCAGTGCTCTGGCCTGTCCCAATGGCATGGGTGGCGCCGGAGGTGCGGGAGGCGGTGCCGGCGGCGGCGCTGTCGTTGCCGAGCAGCAAATGTCGCAGGAGCAGATGTCAGCGGTGGCCGCCGTCGCGCACAATATACGCCAGCAGATGCAAATGGCTGCCGCCGCGCAGCATCAGCACGGGGAGGCGGGGCCGCCGCAGCCGCCGCCCGGACTCTTTCAATTGCCGCCGCATCTGGGGGGCGGCGGGCCGGGCGGACGGTCGAGCATATCGCCGGCATTGAGCAGCGGCTCGAATCCGTCACTCGGCCCGCTGGCCCAGCGGCATGCGCCCTCGCCCTGCGGTCCCGCCGGCCTCATGCCGAATCTGCCGCCCAGCATGGCCGTTGCACTGCATCGTGATCCGGCCTCCGCCGCCGCCCTgctcagccagcagcagcagcatcatctgcagcagctccagctgcatcagcaccagcagcagcagcaacaacaacaacagcagcaacatgtgctgcatcagcaacaccagcagcagcagcagcagcaacaggtgcATCCTCATCATATGCAATCGCACAAATCCGGTTTCGGTGCCAGTTCCATGCCCACAGTCagcgcccagcagcagcagcagcagcatctgggTTTAATGCAAGCGgacaaatccaaatccaagaGTAGTCCACTGCGCAGCGAAACTCCCAGCCTGCATTCTCCACTCACAGAGCTGGGTCTGGAGATGGGCTACAAGCGGGAATACTCGCCGTCGCGTCTCTTTGCCGATGATCTGGCGGAGCTGGTGGGCGCCAGCGGCAACGTGAACATCTCCTCCTCCACATCCTGCGGCGGCACAACGCCAGCAGCCGGAACAGGCGCCGCGGGAGCAGCCGCATCGGGCGCTGGAGTCACCACCGATCtctgctccagcagcagcggcagcatcaaGGTGGAGCCCATCACCACCAGCAGCGAGTAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDNKDMKDDSMGSHMPPYGRHSPVFPLQDMTLSYPGASPVMPGSGAASLSALACPNGMGGAGGAGGGAGGGAVVAEQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPPQPPPGLFQLPPHLGGGGPGGRSSISPALSSGSNPSLGPLAQRHAPSPCGPAGLMPNLPPSMAVALHRDPASAAALLSQQQQHHLQQLQLHQHQQQQQQQQQQQHVLHQQHQQQQQQQQVHPHHMQSHKSGFGASSMPTVSAQQQQQQHLGLMQADKSKSKSSPLRSETPSLHSPLTELGLEMGYKREYSPSRLFADDLAELVGASGNVNISSSTSCGGTTPAAGTGAAGAAASGAGVTTDLCSSSSGSIKVEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00508251;
- 90% Identity
- -
- 80% Identity
- -