Basic Information

Gene Symbol
-
Assembly
GCA_035045305.1
Location
JAWNPD010000649.1:2174905-2176168[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.6 5e+03 -1.9 0.0 19 44 38 66 25 96 0.59
2 3 2e-09 3.7e-06 27.3 0.1 10 88 136 204 132 205 0.84
3 3 6.2 1.2e+04 -3.2 0.0 6 24 263 281 260 296 0.69

Sequence Information

Coding Sequence
ATGCACAATCCTCGCGAGCATCTACGCTGCAGTAGGCGCGGCTGCAATTACACCACAAACCGGGCGTACAACTTGGAGCGCCATGAGCGCAACCATGACAAGGGCAAGGTGCCGATATCACAGTGCCAGCCGTGTCCACATTGCACATATGCCGCCGGATCGCTGCACAACTTAATGCGGCACATAAGCAAAAAGCACGCAGGAATAGCTGTAAAAACAAAGACGGAGTCTCTAACTATCCAACAAGTGGAACAGCAAAAGGAGGCGCAAGAGACAACGTTGCATAGGGAACCAAGTCCGGAGCAGCTGCAACCAGTGGAACCGGGAATCAGAAACAGGGAATCGGAATCCGTGCAACTATTGGATCCATCGCTGTGGTTTTGGGGCAatccgcagcagcaggagaaaAACTTCCTAAAGCGAACCGGACTTAAAGATGAATGTAAAATACAGCAGCGTACCGTCAAAATGTTTAAATTTTATACTTTGGTAAAAGCGAGAGGAGGTGCTTTAAATGTCGATGAATGGGATGATGTAACCGCAGCTTTGGGCCTGGTACTCGGATCCGGTTGTCAAATACGTGACAAGTACATGGAACTGCTTTACGAACACGAGCGGAAAGAGGAGGAACGTGTGAGGGAGTCGCAGGATGTGAAAGGTGTGCCTCCTTGGTGGGATGATGGGGACTTCATCACGGACAACACTGATTCAACACCCGAAACAGATCAATtggaaaataattattgtccatCTGTAAATGCTCGAAATGCGATTGTTAAATTGATTTACGACAAGTATTATACGACACATTTAAAGAACAGCAAACCCTTTGAAAGGTTTCCTGTAAAGGATTCCTGGCTCCAAGCCACAATGCTCAATTATCAAGCGCTCAAATGTGAAATCCTTTTTCGGCATTGTGCTGCTCCTTGA
Protein Sequence
MHNPREHLRCSRRGCNYTTNRAYNLERHERNHDKGKVPISQCQPCPHCTYAAGSLHNLMRHISKKHAGIAVKTKTESLTIQQVEQQKEAQETTLHREPSPEQLQPVEPGIRNRESESVQLLDPSLWFWGNPQQQEKNFLKRTGLKDECKIQQRTVKMFKFYTLVKARGGALNVDEWDDVTAALGLVLGSGCQIRDKYMELLYEHERKEEERVRESQDVKGVPPWWDDGDFITDNTDSTPETDQLENNYCPSVNARNAIVKLIYDKYYTTHLKNSKPFERFPVKDSWLQATMLNYQALKCEILFRHCAAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-