Basic Information

Gene Symbol
ARID2
Assembly
GCA_035045305.1
Location
JAWNPD010000387.1:3804173-3809772[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.3e-25 1.6e-21 76.6 0.0 2 89 85 171 84 171 0.93
2 3 10 1.9e+04 -5.5 4.0 8 75 1043 1064 1039 1080 0.50
3 3 1.9 3.7e+03 -1.5 0.2 4 29 1392 1417 1379 1425 0.46

Sequence Information

Coding Sequence
ATGACGTCCATTGATAGCGTACGCGTGCTGCTTCAGTCTCTGCCAGCAGCATCGCCTGCCgtcgccagcaacagcagcagcaacaacaacagtaataatGCACTGCTACATGAATTGACGCCGGCAAAAGGTAGCGCTGCGACAGCAACACCTTTGCGCGCGCGAAATacacaacagctacaacaggcgcaacaacaattattttttggcactCCGGAAAAGTCGACGATTGATGAAAAACAACTAAATCCGCCAGAggaattttggcgtgatttgcATCAGTTTCACGAGCGGCGCGGCACACCGTTGACGCAGGCCGCCAAGATCAGTGGTAAGCATGTGGATTTGTATCGGCTGTACCAGGAGGTCACCGAACGCGGTGGCTTCAGCAAGGTCAACATGCGGGATGAGTGGGATGAGGTGTACAGCGCGCTGGACACGCTGCGGGATCGCTGCGTCAATGGCACCGCTGGCATTAAGCATATCTATCGACGCTACTTGGATAAATATGAGCGCATGAATTTTCTGGGCGAGGATCCGGACAAACTGGAGGCCTTGGAGGCGGCCATTGAGTGCGCGGATCTGGGCGCCAGCGCCAGTCGTGCGCGCTCACGTGCCCTGATAGGCGGTGGCGTTAGCGGCGGAGGCATTGGGCTTGATCGGGGCATGGGCAGCATTTTTGGAGCAGCGCATTCTACGCTTACGGCCGTGCCCATGGCGTACAATCAGCGTCAGCATGTGGTGAGTGCCGATCGCCGGCGGCAGTATAAAATGTCCACACAGCTGCACAAGCACAGCAGCTATGAGAAGCTGCTCCTCTCGCTAATCTCGCCGCTGCCCAATGAGCAGGACTTTGCCATCAATGTGTGCACACTGATGGCCAATGAGCCGCGGCCAACGCTGCAGCTGACCGAGTGCCCCAAGCTGTTGGATGTGCTCCTGGCCCATCTGGGCGTCTATGCGGATTACACCATGCGACAGCTATTCCAGCAGGGTCACAACACTGCTGGCTTGCAGGTGCGACGCCTCTCGAAGCTTAATTTCTGGCGGGATTTGCTCCACGATAAGCCACAAATCCTGGACCTTTACACAGACGAACAGGCCTGGCTGGACAATGGTCTGATAAGCAAGGAGAGCGCCGCCAGCGATGATTATCTGTTCGAGTCCGATGATCTCGACTTCGAGCTGGACTTTTTGAATCTGCGTCGCAGTCACGGCACCGACGAACGCATTGGCCAGCGTGTCCTGCAAATTGTCCAGCTGGTGCGCAGCCTGAGCTTCCACCAGGAGAACGTCTCGCTGCTCGCCTCGAATCGCACGCTCTGGCGCTATCTGGTCATGGGCGCCAATGTCCGTTGGAGCAACATTCACATACAGGCACTGGAAACTGCTGGCAATCTGGCGCAGCAGTTTGAGCTGCTGGATCCCGCGACGGATGAGCTGTCGCGCAATCTGCTGGCGACGCTGTGCGAGGGCGTTGAGTCCAATGATCGCGCCGTGATCATCAGCTGCCTGGAGATACTCTACAAGCTGTGCGGACGTGAGGGCAATGCTCAGCATATAAATCGCTGTCTTGGACTGGATTTCTATCAGCgtgtgatgctgctgctgtcgctgacGGACGTGATGCTGCTGATCTTTACGCTGGAGGCGATCTATGCGCTGAGCTCTCTCGGTGCACGGCCCTGCTCCATGCTGATGCAGGTGCGCGGTCTGCTCGATCAGCTGGTGGCTCTGCTTACCGTGGAGGCGCAATCTTATGGCGCCGCTGGCTGCATATTGATGCGGGTCGTGGAGGTGGTGCCGGGCAACATGTTGTCCACAGTGACACAGAATACATCTGGCAATCAAATGACGCAGCTGATGACGGTTAAGCAGGCGCCACCGCAGCTGCAACCGCAGCTGCCGGTTGTTACGCTGCCGCCGGCGCCCCCGATGCCGATACAGGTGCAGGTGCTGCCACCGCAAGTTGAGCCCGTTTCCTTGCCACCTCCAGTCAGTGTGCCTGTGCCTGCTCCGCCGCCTGCCGCGCTGCCCCTGCCCATGCCCAGCTTGCCGCAGGTGCAGCTGCCTGTGCCCAGTCTGCCACAGGTGCAGCTgcctccagttccagttcccaCTCCCGCACCCGCTACAATTGTGATGCCTGCGCCGCTGCCCGCTGCGCCCTCGGCGCCGCAGAGTTTCACCCATGATGATGAGACCTATGCCTTGGCCTGGCTGGGCGCCACCTATGAGCGTGCCGGTCAGGGTCACGAGCATCGcgtggagcagcaggagctctACACCATTTATCTATCGCACTGCCAGAAGGCGGGCAAACATTCGGTGGTAAATCGCCTGCAATTTCCGCGCCTCGTGCGGCTCATCTTCAATCCCAGCGTGGGTCCGGCGATTGTGCGTCAGATGGACGGCACGGATTTGCCGGGCACCCACTATGTGGGCATAAGGATGCGCGCCCAGCCGCTGCCCCTGCAGCAGCAcaagcaagcagcagctgttaAAAAGGAGCACAAGCCGGAGCCAACTGTGGAAGCGACTGAAGAGGTCACAGCGGTTACAGCATCGCCCACGCCCAGCTCCTCGCTGATCAAAAGTCTCCTGGCTAATAAAGTAAACGAGCGGCAGCTGAAACAAAAGGCGCAGGCGCAACCACCTGCTCTGGTGCCCACCACGTGCTCCGTCACTAGCTCACCCGCCGGTCAGCCCATCAAGGTCACCTCCAACGCCATCAGCGCCTTTGTCAACAATCCGCTGATGCAGCATACGCCTGTGAAGGTGGGTCAGACGACCATCAAGCCGCTGCATCCACAGATGGCGATGGAGAAGAAACCCGTGACGGATTCGGCGCCGCCGCCTTTGGCGCCCTTGAGCGGCTCCAATGTGCTTGCCAAGGATGCACAGGGACGCACCGTTATAATACAATCGAAGCGCAAGCTAACCATTGATGAGGAGCAAAACAAGCGACTGGCATTGGACAATAGCAATGTACCCGCGGCTAAGGATGAGACTCAGGTGACGCCCTCGAAGAACGCCGCCAATCTCTATGCGGATCTGGCTGCGTCAATACTTGAAGATGAGGATATGGATGATGTGCCGCCGTTGGCTGCATCCAGTCAggagcaacaactgcaacagcaacatcagcagcagcaacaacaactacagcagcaacaacagcagcaacagcaacaactgcagcagcagcaccagcaacaactgcagcaacaacaacaacaattgcagctaaTACCCGCCAAAGTGCTGCCGGCACAGCGACAGCTAATCTTTCCCACGGGCAACCTGCCAGCAGCACCGCCGCAACTGAAACTGGCCACCACGGCAACCATCAAAACGGATCAGGGTCTGCAAACGGTGCCGGTTATATTGCAGCAGAAAACGgagcaacaaatgcagcagcaacagcaacagccgacACAAACGCAATATGTGCTGGCCACCAATCAGCAGGGACAAACGTATCTGGTGGCTCAGCAAACGGCTGCGGTGCAAGCGCCCTCCTCACAGTCATCCGCGCCCACTTTGCTGGTGACCCAatcgccgcagcagcagaccAAAACAATAATCATACTGCAACAGCCGCCGGGtgtgagcagcagcaatgtgCCCGGCACACAGAAGGTGATCATGACGACGGCGCAGGGACAACAGGTGCTGGtgaccacaaccacaacaccCTCTCAACAGCCACGCCCcgcagcacaacaacagcagcagcagcagcaaatcttTCTCAATCCGCAGCGTGCGGTGCCTGCTGCCTTGGGTGGAGGTCAAATGTCACCATCGCTGCTCTCGCAGCTGAATCAAATACCGGCAACCATCAAGCTACATCAACCACAGCTCACTCAAtcggcgcagcagcagcagcaactgcatcgAGTGGCCACCAAATCGGCGCCCATAccacaactgcagcagcatcaatcCATCATCCAGCAGCACATCATATCCGGTCCGAATGCCACACCAGACAAGCGACAGCTGCTCCTGGGTGGCATCAAGGAGACGACGCTCATCACCCAAACGCCGGCCACAGCGACGCCACTGCAGCAGAGTCAACTCAATTCGCAGACAATTATAACCACACAACCGCAggcaacaggagcaggagcagtagTTGTTGGCGGTGgtatgcagcaacagcaacagcagcagcagcagcacatacGCACCGTgctggaacagcagcagcagcagcagcagcatcatccaTCCATAATACAGCAAAAGATTTCGCTTCCCACAGTGCTAGCAGAGGCACCCAAATCGAAGGCAGTGCCCGTGGCAGCCATGGCCAAGATGCCAATGCCGCCGCCAGCGCCGTCGCCggtgcagcaactgcaacagcaacaacaacaacaaatgcctGCGCTGAAACCCACCCAGCAGGCAGTGCCGTCAACGGCCAGCGAAACAAAGCCGGCTGAGCAAAGTATAAGCGCAGCAGTTGCCACAACAGccatagcaacagcaacaacaaccgcaaacgccagcagcagcagcagcattaatCCCACTGCAGCCACACCCGCCGTAACCGCTGTGCCCGTGGATGTCAATTGGCTGTATATTTGCGATTGGCGCAACTGTCCGCGTCGCAAATTTAAATCGCTGAACGAACTGCAGCATCACGTGTGCAATGTCCACTGTCCGGATCATCTGGATCAGGGCGCCGAGATCTACTGTCAGTGGGGCAGCGGCGCCAGCTTGTGTGACAATATTGCCCGCAAGCGTTACTCACTGATGACGCATCTCGTCGATCGTCATCTGGCGCTGGATGATCTGCGTGCCAGCGTGCAGCGACGCCTGGCAACCGGCATACACAATGTGGCGCCATCGCAGCCAACGGTCACCATTGTACGCAATGCAGCGCATGCCAATCCGCCGGCTGCAAGTGCGCCGGCGACAGCCACAGCTGTGGGCACCTCCGCTTTGCAGGCCATCAAGCGGCACTCGGCTGACTTTCTCAATTGCAAAGAGCTGATGGATGAGAATGAGGGGCCCGTTACGAAGAGCATACGCTTGACGGCGGCGCTCATACTACGCAATCTGGTCAACTACACATCGACAGCCAAACGTGGCCTAAAGCGCTATGAGCCGCACTTGGCCAATGTGGCGTTTAGCAATGTGGAAGCCAGTGGCGTCTTATCTCACATACTACACGAGTTGAGTCAGTAA
Protein Sequence
MTSIDSVRVLLQSLPAASPAVASNSSSNNNSNNALLHELTPAKGSAATATPLRARNTQQLQQAQQQLFFGTPEKSTIDEKQLNPPEEFWRDLHQFHERRGTPLTQAAKISGKHVDLYRLYQEVTERGGFSKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERMNFLGEDPDKLEALEAAIECADLGASASRARSRALIGGGVSGGGIGLDRGMGSIFGAAHSTLTAVPMAYNQRQHVVSADRRRQYKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEPRPTLQLTECPKLLDVLLAHLGVYADYTMRQLFQQGHNTAGLQVRRLSKLNFWRDLLHDKPQILDLYTDEQAWLDNGLISKESAASDDYLFESDDLDFELDFLNLRRSHGTDERIGQRVLQIVQLVRSLSFHQENVSLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFELLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSSLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNMLSTVTQNTSGNQMTQLMTVKQAPPQLQPQLPVVTLPPAPPMPIQVQVLPPQVEPVSLPPPVSVPVPAPPPAALPLPMPSLPQVQLPVPSLPQVQLPPVPVPTPAPATIVMPAPLPAAPSAPQSFTHDDETYALAWLGATYERAGQGHEHRVEQQELYTIYLSHCQKAGKHSVVNRLQFPRLVRLIFNPSVGPAIVRQMDGTDLPGTHYVGIRMRAQPLPLQQHKQAAAVKKEHKPEPTVEATEEVTAVTASPTPSSSLIKSLLANKVNERQLKQKAQAQPPALVPTTCSVTSSPAGQPIKVTSNAISAFVNNPLMQHTPVKVGQTTIKPLHPQMAMEKKPVTDSAPPPLAPLSGSNVLAKDAQGRTVIIQSKRKLTIDEEQNKRLALDNSNVPAAKDETQVTPSKNAANLYADLAASILEDEDMDDVPPLAASSQEQQLQQQHQQQQQQLQQQQQQQQQQLQQQHQQQLQQQQQQLQLIPAKVLPAQRQLIFPTGNLPAAPPQLKLATTATIKTDQGLQTVPVILQQKTEQQMQQQQQQPTQTQYVLATNQQGQTYLVAQQTAAVQAPSSQSSAPTLLVTQSPQQQTKTIIILQQPPGVSSSNVPGTQKVIMTTAQGQQVLVTTTTTPSQQPRPAAQQQQQQQQIFLNPQRAVPAALGGGQMSPSLLSQLNQIPATIKLHQPQLTQSAQQQQQLHRVATKSAPIPQLQQHQSIIQQHIISGPNATPDKRQLLLGGIKETTLITQTPATATPLQQSQLNSQTIITTQPQATGAGAVVVGGGMQQQQQQQQQHIRTVLEQQQQQQQHHPSIIQQKISLPTVLAEAPKSKAVPVAAMAKMPMPPPAPSPVQQLQQQQQQQMPALKPTQQAVPSTASETKPAEQSISAAVATTAIATATTTANASSSSSINPTAATPAVTAVPVDVNWLYICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDQGAEIYCQWGSGASLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVAPSQPTVTIVRNAAHANPPAASAPATATAVGTSALQAIKRHSADFLNCKELMDENEGPVTKSIRLTAALILRNLVNYTSTAKRGLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00513242;
90% Identity
-
80% Identity
-