Basic Information

Gene Symbol
grh
Assembly
GCA_035045305.1
Location
JAWNPD010000387.1:16951698-16982092[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.4 3.8e+03 -3.0 6.7 87 122 204 239 155 291 0.57
2 3 0.17 1.6e+03 -1.8 1.0 91 105 504 518 477 541 0.56
3 3 6.6e-64 6.2e-60 202.3 0.4 24 221 643 835 629 837 0.93

Sequence Information

Coding Sequence
ATGATGCAGGATGCAACAAGCAGCTACGCCATATCCTACACGGACTGGATAGCTGAGTCACGacgcagcgccagcagctaCAGCCTGgatgcacagcagcagccaccggCACCGCCAACGCCACAGCAacatcataatcatcatcatctgcagcctcaatcccaatcccaatcgcagcctcatcatcataatcattatGGCAGCCAATCGCCGCCGCACAGCTACTATGAGCCGCCCAAGGAGCCGCTGCAGCATCTGCCGCTCACTGCCGCCGGGCTCATGCAATCGGTGGCTGCGGAGATACAGCTTAGCGAGCAGCAATCAACTCCACCCCCGCCAGCAACAGCTCACGCCTCCAATTCGACAGCCTATGCGGTCTACAACTACTACCGAGATGTTCAACATGTGGATGTCGATGAGGAGCACAATACTggagcacaacagcaacagttgctgtggAGCAATGCGAGCAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaagGCTTTCTGCTTGGTTCACACCCCTCTTCATCGGCCGGCACAACCGGCGTTGTgtccacaacaacaatctcgaatcagcagcaacaacaacatcagcaacagcagcagcaacaacagcagcaacagcaacagcaacaacatcagcaacagcaacagcagcagcagcaacaacaacagcagcagcagcatcaacagcagccgccacaTCCCAGCGACATTGTAACCATAACTACGGGGAGCGCGGGTTCAATTGTCTCcgctgcagtgcagcagcagcagcaacaacagcagcagcaacagcagcagcagcagcaacagttgctgagCATCAAACGTGAGCCCGAAGACTTGAGCAAGGATCCCAAGAATGGCAATCTGGGCGCCGCATCAAACGGTGGCGGTTCAGTCATAACGCAGAAGATATTACGCGTGGATGCAGCTAGAACTGAAGCTgaggcaactgcaactgcaactgctaaATTCGAAAATAGcgataaaacaacaacaagtgcaacCGTAACTGCAACTAGTCCCGCCAGAGCCACAGCAGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCAACGGCGCCAGCACACAGCAGACAACACTGCAGCAAGCGCAGAGTCCCAGCCCCGGGCCGTACATCACAACGGATAGCTATGGCATGTATACGGCCACACGATTGCCGCCCGGCCCACCGCCCGCAACAACATTCATACCGGAATCATATTACCGCGAATACTTTGCACCCGATGGCCAGGGCGGCTATGTGCCAGCTGGCACGGCACGCAGCCTGTACGGCGAGGATGTCTCCGTTTCGGCGCCGCAGCCCGTGGGCGGCGTTTATGAGGCGCGCTTCAGCAGCAACGggcccaccaccaccacagtGCTGACCAGCAGCAATGCACACCACCacagtcaacagcagcagcagcagcagcaacaacaacagcagcagcagcagcagcaacatcaacagcagcaacaggaacagTCTGTCAAAAACGGGACCACTCCACTATATGCCAAGGCTATAACGGCGGCGGGTCTAACAGTCGATTTGCCCAGTCCCGATTCAGGCATTGGCACGGATGCCATCACGCCGCGGGATCAGAATCACATACAGCagTCCTTCGATTATACGGAACTTTGTCAGCCAGGCACCTTAATCGATGCCAATGGCAGCATACCCGTTTCCGTGAACAGCATCCAGCAGCGTACGGTGGTGCATGGCAGTCAGAATAGTCCAACCACATCCCTGGTGGATACCAGCACAAATGGTTCGACACGTTCGAGGCCCTGGCACGATTTCGGCCGCCAAAATGATGctgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGTTATCATTTGGAGAGCCCGATCAGCTTGTCACAGCGTCGTGAGGACGATCGCATCACCTACATCAACAAGGGGCAGTTCTATGGCATTACGCTGGAATATGTGCACGATGCGGAAAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTAATGTTTCGCGAGGAGAAGAGCCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTGGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCCGTTCAGTGCCTCAGCACGGATTTCAGCAGTCAAAAGGGTGTTAAGgGTCTGCCGCTGCACGTCCAGATCGATACGTTTGAGGATCCACGGGATGCGACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCGGAACGTAAGACGCGCGATGAGGAGCGTCGTGCCGCCAAGCGCAAAATGACAGCCACTGGACGCAAGAAGCTCGATGAGCTCTATCACCCAGTCACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTGCTCTTCTCGCCCGCTGAGGATATGGAAAAGAGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAGGGCGCCTCGCCGTTCTTACTACACGGCCAGAAggtggccacgcccacgctTAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGATAAGAAGGATCACATATTGGATCAGAGTATGTTAACCAGCACGCCCATGTCCGATTTCGGACCACCAATGAAACGGGGCCGCATGACGCCACCAACAACGGAGCGTGTGATGTTGTATGTGCGGCAGGAGAACGAGGAGGTATATACGCCGCTGCATGTGGTGCCCCCGACCACAATTGGCCTGCTGAATGCGattgaaaacaaatacaaaatctcAACAACGAGCATAAATAACATATATCGCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAATGAGGACATCTTCTTGCTGGAAGTGCAACAGATCGAGGATGATCTGTACGATGTGACGCTCACGGAGCTGCCCAATCAGTAG
Protein Sequence
MMQDATSSYAISYTDWIAESRRSASSYSLDAQQQPPAPPTPQQHHNHHHLQPQSQSQSQPHHHNHYGSQSPPHSYYEPPKEPLQHLPLTAAGLMQSVAAEIQLSEQQSTPPPPATAHASNSTAYAVYNYYRDVQHVDVDEEHNTGAQQQQLLWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAGTTGVVSTTTISNQQQQQHQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQHQQQPPHPSDIVTITTGSAGSIVSAAVQQQQQQQQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAASNGGGSVITQKILRVDAARTEAEATATATAKFENSDKTTTSATVTATSPARATADLEMYATTGGTQIYLQTSHQNSNGASTQQTTLQQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFIPESYYREYFAPDGQGGYVPAGTARSLYGEDVSVSAPQPVGGVYEARFSSNGPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQHQQQQQEQSVKNGTTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISLSQRREDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
-
80% Identity
-