Basic Information

Gene Symbol
Camta1
Assembly
GCA_035042075.1
Location
JAWNLW010000133.1:794262-822811[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1 1.7e+04 -6.7 6.3 90 90 185 185 141 246 0.51
2 4 5.2e-49 8.8e-45 151.1 2.2 2 116 307 419 306 419 0.98
3 4 0.039 6.6e+02 -0.0 1.1 38 73 635 670 559 697 0.67
4 4 0.49 8.4e+03 -3.6 0.1 76 93 1695 1712 1685 1714 0.79

Sequence Information

Coding Sequence
ATGGCAGGGTATCGCGCCCTGCCCCTGGCACCCGTCGCGGCCAGCAGCATGGCCACAACGGCCTCTGTGCAGCCGAGCAGCGGACACTCGGCCTCGACCATGGCCTATGCGCATCACCATCAGTCGATGACGGCCATGTCCAATAACGGTATTATCTATCAGTCGGCGGTGCATGCCTCCATACACAGTTTGAATACAGTACAAAGCCAGCATCGCTCATCAACCACACATCATCACATTTTAgccacggcaacagcaacggccaCGGCAAcggctgcagcggcagcggcaacagcagcagcggcggcaacggcagccgcagccgttgcagttgcaatgccaacgccaacggctgcggcagcggcaacagcagccgcagcggtGGCAGCCATACAGccgacggcagcagcagcagcagcaacctatggccagcagcagcaacatatgcagcagcagcagcaacaacagcagcaacagttgcagcagcagcaacagttgcagctgcagtccacgcaccagcagcaacaccaacagcagcaacaacaccaacagcaacaacagctcatgctgcaacagcaacactctcaacagcagcagcaacatcagcagcaattgctgccacatgtgcagcaacatcatctgcaacatcatcaccatcagcagcagcaacaacagcagcagcagcagcaacacttgaCGCCCGCgttgcaccaccaccaccaccatcatcaccaccaccagcagttGTCGCTGCACCAGAACCACCTCTACTTCAATGGCCTgggccatcatcatcatcaccatcgcCAGATCTTTAGCCATCTGCAGAGCGCCCTCTTGCCGCTCAGTGTCAATGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTTCCATCGCAGCGGCATCGTTGGAATACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCACAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCGAAGAGCGGCTCCTTGCTGCTCTATTCGAGGAAGAAGGTGCGTTACAGACGTGATGGTTACTGCTGGAAGAAGCGCAAAGATGGCAAGACGACTCGCGAGGATCACATGAAACTGAAAGTACAAGGCACCGAGTGCATCTATGGCTGTTACGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTTTTACAGAATCCGGACATTGTTTTGGTGCATTATCTGAATGTTCCATATCCGGATGATAATAAAATGGCTGTCATAGCGCCGAGCATAACGCTCTGGGGCGATAAGAAGGAGTGGACCAAGGAGGAGCTGGTCAGTCAACTGAAGCCGATGTTGTCTACAGTGAATTCAGATGAAGACTCGGACTCGGGCAACGATATAGAAATATCGACGGCTGAGACAGTGGAGTCCATTGTGTGCCAGCTGATGGAGAAGCAGCGTCTGTCGCGCCAGGCGGCGTTGGTGAAACAACTGGACTGCGGCTGTGGTGATGCAGCTTGTGCCGACGGCAAGACGTGCACACACCCTGTAATGCGACGCACGGGCATACTCAAGTCGGTGTCGGAGAAGCGGGCCAGCGATGGCTACAATGCCCAGACTGGCACACCCAATGTTGTGGTGGCCAGCAAGCTCTATTCACGCTGGTCGGAGCGCCACAGGCAGCGGGAGGCGGCGTTGCACCTGGATAATCCACATGCGCAGTTCCACAATGCCAcacagcagttgccacaaGAGTCGGCGATCAAATTCCAAATCAttccgcagcagcagcagcagcaacagcagcagcaacaacagcagcagcagcaggcagatgGCAGCAACTATCAGCAGCAATATCGTGGTGCCAATCAAATGTTGGCCACAAGAAGCAATCTGAtaatacagcagcagcagcaacagcaacagcagcagcaacatcaacaatatcaacagcagcagcaacagcaacaacagcagcagcaacacttaAACTTGCAACGTTTTGTGGCCAGTCACAATCAAAGCAATCAAATTGAGGCCATGTGCATGTCACCCGAGCATCATCAACAGCTGAGCAGcgggggcagcagcagcagcagcaacaacaacaacagcaatctgctcagagcaacaacagcagcagcagcagcagcagcaacaacgtctTCCGCTGGCAACACTCCTTCCACGTCGGCCACAACATCCAGCTCGAGTTCCTTGCAGTCGATTATCGATggcaatcagcagcaacaaattgcagcgacagcagcaacaacagcagcagcagcagcaacaacaacagcagcaacagcagctgtaaaTTGTGATAATTTAATGAGTGAGCTGGAGTTGggtgagcagcagcagcaacagcaacaccagcaacagcagcagacagcgaggagctacaacagcaacagcgtcaACAATCAGGCCACGGCCCCAATTCATAATGGTTGTGCAAACTACAGTGCTTCCAGCAGTGATAACAGCAGCCAAATTAGCGCCAGCGACGACAGCAGCTTtggcgccaacaacaacaacaacagcaacagcaacaacaatcagagcaacagccacaacgaGGAGGAACCACAAGCGGACACAATGAGCTTCTTCAATGAAACATTGGACTTGTCCCATGAGGACATACAACGCACGCTCATAGCCAACATGCCGTACagcaatgcaacagcagcagcagcaacagcagcagcagcaacaactgcgctgctggagcagcaacaaaagcagcaacatcagcaacagcaacaacaggcaatCAGCGTCGACTCACCCGCCGCTGAGGATGAGGACACCGCCGATGTCTTTGCTAGCTTGGATGCCTTTGATATGTTAGTAGAGTTTCCAGAACTCGACTTGGATGACAAGCAGGCGCTGAACAACACAGCCTTGGAGCAGGAGCACAGTCATGGCCACAATCTGCCGCTGCATGCCACGGCGACCGCATCCTCCTATGTGGACACGGCACAGACGCAGCGCAAGCTGCTCAACATTTGTGACTTCAGTCCCGAGTGGTCGTACACCGAGGGCGGGGTCAAGGTGCTGGTGGCGGGTCCCTGGACAAGTGACGGTGGCTGTTATACGGTGCTCTTTGATGCCCAGCCAGTGCCCACGGTGCTGGTGCAGGAGGGCGTGCTGCGCTGCTATTGTCCCGCCCATGAGGCGGGCTTGGTAACGCTGCAAGTGGCATGCGGCGGCTTCCTCGTCTCCAATTCGGCAATGTTCGAGTATAAGCTCTCGCTGCTCGCCGATGCACCGTTCGATGCCAGCAGCTCCAACGATTGCCTCTACAAGTTCACGCTGCTCAATCGTCTCTCCACCATCGAtgagaagctgcagctgaaagtGGAGAATGAGCTGGCGACTGACCAGACCGCACTCTATCTGGAGCCCAATTTCGAGGATAAACTGGTGGCCTATTGCCATCGCTTGATGAAGCACGCCTGGAGCACGCCCAGCACCGTTGCCAGCTGGAGTGTGGGCCTCCGCGGCATGACGCTGCTCCATTTGGCCGCTGCACTGGGCTATGCCAAGCTGGTGGCGGCCATGCTCAACTGGCGTGCCGAGAATCCACATATCATACTCGAAACGGAGCTGGATGCACTCAGTCAGGATGTGCATGGATTCACACCGCTGGCCTGGGCCTGTGTGCGTGGACACTTGGAGTGCACACTGTTGCTGTACAAGTGGAATCACAATGCCTTGAAGATCAAGACGCAGGCACAGCAAACGCCACTGGATCTGGCCAATCTCAAGGGCCACAAGCAACTGTTGACCCAGCTCTGTCGGCTGGAGAAGGAGCGTTGCCGCAAGCCCTACCCACGCGGTGGTCTGGCAAATCTATCCATGAACCTCTCCCTTGAATCGCCAGCGGAGTCGGAACCAGGCTACAGTGTCTATGAGCTGGAACTGCAACGCAGGCACGACGGCGTCTTCCTGCGTCCCGTTGCCATGCACAGCAATCAAAGTCcgcccaacaacagcagtcgcTACTCGAAGCGCTCCTCCATCGACAGCGGCATCAACATGGACATGCGCAGCAAATCTGGCAAACCTTCGGCTCGTTTGCATGGCGCCAACTTTGATGGGCACGACAGCTATGCCTTGGGCGTGGACTCACCGCTGGATGGGCTGGCGGGGCCAAATTGCACGGGATTGCTGTCGCCGCTGCGGAAGATGGACTTTGCGTTGTGCGAGGTATCCACCGGCGAATCGAGTCCCATTCACGACAAAGACATCGATTGCGATGAGAGTTCAACGAGCGCAGCCGATGTCAACATTAGCACTGAGCTGAGCGATGCCGTTGTAGGGGATTCGGATGCCAAGGTGCTGACGCTGGCGGAGCACATCATAGCCGCGATGCCCGAGCGGATTAAGAACGAGGCGGATGAGCTGATGGTGCTGGGCAGTCCACTAACGGAGCCGCTCACCTCGGAGTCATCGGCGTTGACGGATAGCTTCATGGATCCGCTGCTGGACTCGCTGCCGAACACGCATTTCGATAGTGACTTTAGCTTTGATTTCCACGACCACAGCTATCGCTATCACGATGTGAGCACACCCTGCTCGAGCCTAAGTCCGGCCAGCTCGGGTCCATTGCAGTCACCGGCCAGTTATTCCATATTGGGCACAGATCCCTCCGTCAGCTCGCCCAGTCCGCCGCCATCGACAAAGCAGCTGACAGAGTTCCTGCATGCCTCGAGCATTTCACAGTATCCCTTCGAGGCGGACTTCTCGAAGCTAACGCTAACGGACACGGAGCAAAGGGAGCTGTACGAGGCGGCCAAGTGCATCCAGAAGGCGTATCGCTCGTACAAGGGACGCCAGAAGCTCGAGGAGCAGAACAAGGAGCGCACCGCTGCCATCGTCATACAGAACTATTATCGTCGCTACAAGCAATACGCCTACTACAGACAGATGACCAACGCGGCTCTGGTGATCCAACATGGCTATCGCTCGTATCGCCGGAACAAGCGCTTCAAGAAGTCGCAGCATACGCCAAGTGGCCTGGCTGGCACGGACAGTGAGCACGGCAGCGTGAGCAGCAACTCGCAGTGTCTGTCCAGCTACTATGACCACTACAAGcaggatcagcagcagcagatcgAGCTGAGCTCACAGCCCAGCACGCCCAAGGAGGCGAGTCCCTCCGGTCCCCTGAAGCGCACCTATTCGCAGTCCACACAGAATCAGGCGGCTCGCAAGATACAACAGTTCATGAGACAATCACGCATCAAActacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTTTCAAGGGCAGCAGGAAATGTTAATTTGCCCTAATGAGAATGGcagcagcaacgataagaacagcaacaacaacagcaacagcaacagggaactgctgcaacagctgctacCCCATCAATGA
Protein Sequence
MAGYRALPLAPVAASSMATTASVQPSSGHSASTMAYAHHHQSMTAMSNNGIIYQSAVHASIHSLNTVQSQHRSSTTHHHILATATATATATAAAAAATAAAAATAAAAVAVAMPTPTAAAAATAAAAVAAIQPTAAAAAATYGQQQQHMQQQQQQQQQQLQQQQQLQLQSTHQQQHQQQQQHQQQQQLMLQQQHSQQQQQHQQQLLPHVQQHHLQHHHHQQQQQQQQQQQHLTPALHHHHHHHHHHQQLSLHQNHLYFNGLGHHHHHHRQIFSHLQSALLPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDAACADGKTCTHPVMRRTGILKSVSEKRASDGYNAQTGTPNVVVASKLYSRWSERHRQREAALHLDNPHAQFHNATQQLPQESAIKFQIIPQQQQQQQQQQQQQQQQADGSNYQQQYRGANQMLATRSNLIIQQQQQQQQQQQHQQYQQQQQQQQQQQQHLNLQRFVASHNQSNQIEAMCMSPEHHQQLSSGGSSSSSNNNNSNLLRATTAAAAAAATTSSAGNTPSTSATTSSSSSLQSIIDGNQQQQIAATAATTAAAAATTTAATAAVNCDNLMSELELGEQQQQQQHQQQQQTARSYNSNSVNNQATAPIHNGCANYSASSSDNSSQISASDDSSFGANNNNNSNSNNNQSNSHNEEEPQADTMSFFNETLDLSHEDIQRTLIANMPYSNATAAAATAAAATTALLEQQQKQQHQQQQQQAISVDSPAAEDEDTADVFASLDAFDMLVEFPELDLDDKQALNNTALEQEHSHGHNLPLHATATASSYVDTAQTQRKLLNICDFSPEWSYTEGGVKVLVAGPWTSDGGCYTVLFDAQPVPTVLVQEGVLRCYCPAHEAGLVTLQVACGGFLVSNSAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKVENELATDQTALYLEPNFEDKLVAYCHRLMKHAWSTPSTVASWSVGLRGMTLLHLAAALGYAKLVAAMLNWRAENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQAQQTPLDLANLKGHKQLLTQLCRLEKERCRKPYPRGGLANLSMNLSLESPAESEPGYSVYELELQRRHDGVFLRPVAMHSNQSPPNNSSRYSKRSSIDSGINMDMRSKSGKPSARLHGANFDGHDSYALGVDSPLDGLAGPNCTGLLSPLRKMDFALCEVSTGESSPIHDKDIDCDESSTSAADVNISTELSDAVVGDSDAKVLTLAEHIIAAMPERIKNEADELMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQHTPSGLAGTDSEHGSVSSNSQCLSSYYDHYKQDQQQQIELSSQPSTPKEASPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQFQGQQEMLICPNENGSSNDKNSNNNSNSNRELLQQLLPHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00601780;
90% Identity
-
80% Identity
-