Basic Information

Gene Symbol
-
Assembly
GCA_035042075.1
Location
JAWNLW010000574.1:3349358-3350406[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.87 1.5e+03 -0.4 0.0 18 56 37 77 24 105 0.52
2 2 9.5e-11 1.6e-07 31.5 0.0 25 89 150 206 129 206 0.85

Sequence Information

Coding Sequence
atgaacaataCTCGAGAACATCTTCAGTGCAGTAGAAGAGGATGCAGTTATACCACCAACAGATCGTTTAACTTAGAACGCCACGAACGCAACCATGAAAAAGGCAAGGTACCGGTATCCCAGTGTCAACCATGTCCACATTGTACCTATGCCGCTGGATCACTTCACAATTTAATGCGACATATTAGCAAAAAACATGCAATATTAAGTATAAAGAAGCAAAAGGGGCAACTTTCAAGCAGCAAACTACACCAGCAGCAGGAATTTCCGACGACTGAGCAGCCAACTTCCCAAATTGAAGTTTACTGTAAGCCAGAACCGCATCCTGCGCAACATTCGCTCACATTTGGCAATGTACAACCTTTGAAGCCTTCACTTTGGTATTGGAGCAcgccgcagcagcaagaaAAGAATTTCTTAAGACGTAGTGCTCTGAATGGAGATTGTAAGATACTCGACCAGACCGTCAAGATGTTCAAgtTGTATTCACTAGTGAAAGCAAGAGGAGGAGCCCTAAATGTGGACAAATGGGATAATGTTGCAGCAGCCTTGGGCCTCCCACCAGGATCAGGTCCTCATGTACGTGCAAAGTATATGGATGTACTTATTGAATTTGAGAAAAATGAGGAAAAACGATTACAAGAATATCAAAATGTAGAAGGTGTACCGGCATGGTGGGACGACGGTGATTTTATAAATGATAACGAAACTTGTACGTCCGATGATGCACAGTTGGAGAGCCAATGCTACAAATATTATAGGAATCATTAG
Protein Sequence
MNNTREHLQCSRRGCSYTTNRSFNLERHERNHEKGKVPVSQCQPCPHCTYAAGSLHNLMRHISKKHAILSIKKQKGQLSSSKLHQQQEFPTTEQPTSQIEVYCKPEPHPAQHSLTFGNVQPLKPSLWYWSTPQQQEKNFLRRSALNGDCKILDQTVKMFKLYSLVKARGGALNVDKWDNVAAALGLPPGSGPHVRAKYMDVLIEFEKNEEKRLQEYQNVEGVPAWWDDGDFINDNETCTSDDAQLESQCYKYYRNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-