Basic Information

Gene Symbol
ARID2
Assembly
GCA_035042075.1
Location
JAWNLW010000593.1:597782-604835[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.8e-25 1.5e-21 76.5 0.0 2 89 85 171 84 171 0.93
2 2 10 1.7e+04 -3.9 0.0 28 67 1669 1710 1659 1719 0.71

Sequence Information

Coding Sequence
atgaCTTCCATCGatagtgtgcgtgtgctgcTGCAGTCGCTGCCAGCAGCATCGCCCTCAgtcggcagcaacaacaacgcgcaacaaaatgaattaacGCCGGCAAAACTTGGCTCTGGTGCAACTCCATTGCGCGCGAGAAATACACAGTttctacagcagcaacaacaacaagcacaacaacaactcttttATGGCACACCCGAGAAGTCCTCGAGTGCGGGATCAGGCGGAGGCAAACAGCTTAATGCGCCCGAGGAATTCTGGCGTGATCTTCATCAGTTTCACGAGCGGCGCGgCACACCATTGACGCAGGCGGCCAAGATCAGTGGTCAGCATGTGGATCTATACCGGCTGTACCAGGAGGTGACTGAACGCGGTGGCTTCAACAAGGTGAACATGCGCGATGAGTGGGATGAGGTGTACAGCGCGCTGGACACGCTGCGTGAGCGTTGTGTCAATGGCACCGCTGGCATTAAGCACATCTATCGCCGTTATTTGGATAAGTATGAACGTCTCAATTTCTTTGGCGAGGATCCCGACAAACTGGAGGCGTTAGAGGCGGCCATCGAGTGTGCTGAATTGGGCGCAAGTGCCAGTCGTGCACGCTCGCGTGCCTTGGCCGGTGGCGGCGGTGTCGGCGGTGGCATCGGTCTAACTGGCAGCGGTCTGGGCAGCATATTTGGCAATGTGCACTCCACGCTGACGGCTGTTCCAATGGCGTATAATCAGCGTCAGCATATGGTGAATGCGGATCGCCGGCGTCAGTACAAGATGTCCACACAGCTGCATAAGCATAGCAGCTATGAGAAGCTACTGCTCTCGCTAATCTCACCGTTACCCAACGAGCAGGACTTTGCCATCAATGTGTGCACGCTGATGGCCAATGAGCCGCGGCCAACGCTACAGCTGAGCGAGTGTCCCAAGCTATTGGACGTGCTGCTGGCACATCTGGGCGTCTATGCGGACTATACAATGCGTCAGCTATTCCAGCATGGCCACAACACAGCCGGCATGCAGGTGCGACGCCACTCAAAGCTCAACTTCTGGCGGGATTTACTCTACGATAAGCCACAAATACTCGACCTCTACACGGACGAGCAGGCCTGGCTGGACAATGGGCTGATCAGCAAGGATGGCGACAACAgcgatgagctgctgctgcaatcggATGAGCTTGACTTTGAGCTGGACTTTTTGAATCTGCGACGCAGTCATGGCACTGATGAACGGATTGGCCAGCGTGTGCTGCAGATTGTGCAGCTCCTGCGCAGCTTGAGCTTCCACCAGGAGAACCTGACGCTGCTCGCCTCGAATCGCACACTCTGGAGGTATTTGGTGATGGGTGCCAATGTGCGTTGGAgcaacatacacatacaggcGCTGGAAACAGCTGGGAATCTGGCGCAGCAGTTTGATCTGCTGGATCCGGCCACAGATGAACTATCGCGCAATCTGTTGGCCACACTGTGCGAGGGCATTGAGTCGAATGATCGTGCTGTGATCATCTCGTGCCTGGAGATACTGTACAAGCTGTGCGGACGCGAGGGGAATGCCCAGCATATTAATCGCTGTCTGGGCTTGGATTTCTATCAGCGTGTGATGCTCCTGCTGTCGCTGACGGACGTCATGCTGCTCATCTTTACGCTGGAGGCGATCTATGCATTGAGTGGTCTGGGTGCACGGCCCTGCTCCATGCTGATGCAGGTGCGCGGCCTCTTGGATCAGCTGGTGGCATTGCTTACCGTGGAGGCGCAATCCTATGGCGCCGCTGGCTGCATACTGATGCGTGTCGTGGAGGTGGTGCCGGGCAACATGTTGCCCACAATGGCACAGAGTATGCCAAGCAATCAACTGACCCAAATGATGACAGTTAAGCCGACGCAAGCGGCAccaattgctgctgcactgCCGCCGCCGGCCCCAGCACAGGTGCAAGTGGTGGCGCCACAAACCGAGGCCATTTCATTGCCTGTCGTTGTGCCAGCTCCGGCGGCTGCAACTGCTCCAGTtcctgccgctgctgcggTCGCTGTGCCcgcaaccccaaccccaacctctgtcgctgtcgctgtcgctgtctcccTGCCAATGCCCAGTCTGCCGCAGGTGCAGTTGCCCGTGCCCAGTTTGCCACAGGTGCAACTGCCACCCGCAGTTACCCAGGCAATGATAACATCCACTCCAACGCCAGCGCCCGCTGCCATAGTACAAGCCGCTCTGCTGCCGCCAGCTCCCTCGGCGCCGCAGAGCTTCACCCACGACGACGAGACCTATGCGCTGGCCTGGCTGGGTGCCACCTACGAGCGTGCCGGCAATGGCCACGACTATCGcgtggagcagcaggagctgtaCACCATTTACCTGTCGCACTGCCAGAAGGCGGGCAAGCACTCGGTGGTGAATCGCTTGCAGTTCCCACGTCTGGTGCGGCTCATCTTCAATCCGAGCGTGGGACCAGCCATTGTGCGGCAGCTGGATGGCACAGATCTGCCGGGCACACACTACATTGGCATACGGATGCGCGCCCAACCATTGCCCATGCAACAGCACAAGGCAACCACGGCGACGGCTGGCAAGAAGGATGCCACCAAGCCGGAGGCAGCTGTGGCAGAGGCGCAACTGGAGGAGGTAACAGCTGCGCCGACGCCCAGCTCATCGTTGATTAAGAGCTTGCTGGCCAACAAGGTCAACGAGCGTCAGCTGAAGCAGAAGGCGCAATCTCAACCACAGCCACCAGCGTTGGTGGCAACCACAGCGGCTGTAACTGGCTCAGCGGCTGGACAGCCCATCAAGGTGACGTCCACGGCGATAAGTGCGTTTGTCAACAACCCACTGATGCAGCACACACCGGTTAAGGTGGGCCAAACCACCATCAAGCCACTGCATCCGCAGCTGGCGTTGGAGAAGAAACCGTTGACAGACTCAGCACCGCCGCCGTTGGCGCCGCTGAGCGGTGCCAATGTGCTGACCAAGGATGCCCAGGGACGCACATTGATCATACAATCGAAGCGCAAGCTCACCATCGATGAGGAGCAGAACAAGCGACTGGCTATGGACAGCAGTGGCACTGGCGGCAAGGAGGAGCCGCAGGTGACGCCCTCGAAGAATGCGGCGAATCTCTATGCGGATCTAGCGGCATCCATACTGGAAGACGAGGATCTGGATGATGTGCCGCCACTGGCCGCGCAGTCCAATcaagagcagctgcagcagcagccacaacaacagcagcagcagccacaacaacaacagcaacagttgcagctgcagcaacagcagcagccgcaaatgCAACTCATCCCGGCCAAAGTGCAGCCGGCACAGCGTCAATTGATCTTTCCCGCTGGCACAGCGTCTGCTGCGCCGCCGCAACTGAAGTTGGCCACCACAGCAACCATCAAGACGGATCAGGGACTGCAGACGGTGCCGGTTATTCTGCAGCAGAAgacggagcagcagcagcagcaacagcagccgacACAGACGCAGTATGTGCTGGCCACCAATCAGCAGGGACAAACGTATTTGGTGGCCCAGCAAACGGCACCGGTGGCAGCAGCGCCCAGTGTgccggccacgcccacattgcTGGTGACCCAAACACAGCCGCAGCACCACAATCAGCAGACAAAGACGATCATCATCTTGCAGCAACCGCCAGGAGTGAGCACATCGAATGTGCCGGGCACCCAGAAGGTGATCATGACGACGGCGCAGGGGCAACAGGTGCTGgtgacaacaaccacagcgcCAGCTGGCGCACAGCCACGCCCCAACGCCCCGTCGcaggtgcaacagcagcagcagcagcagccgcagcaaatCTTTATAAATCCCCAACGTGCGGTGCCCACCGCCTTGGGAGCTGGCCAAATGTCGCCTTCGCTGTTGTCGCAACTCAATCAAATTCCAGCGACAATTAAGTTGCATCAACCGCAGCCTGGACAaacgccacagcagcagcagttgcagcagctgcagcagctgcaacgaaCCAAAGCATCGGCAATTccccagctgcagcaacaccAATCCATCATACAGCAACACATCATCTCGggtccagcagcagcagccacagcagcggcggcaacagcTGTGGCAGCCGCTGTTGTGGACAAGCGGCAGATACTCTTGGGTGGCATCAAGGAGACAACGCTCATCACCCAGACGCCGGCAACGGCGGCGCCCCTGCAGCAGAGTCAACTCAATTCACAGACGATAATAACCACACAGCCGCCAGTTGCAacagcgcagcagcaacagcagcagcagctgttgcagcaacagcatcatccATCCATCATCCAACAGAAGATATCGCTAACGGAGGCAGGCAAATCCAAAGCAGTGACGTTGGCTTTGCCCGTAGCCAAGAAGCAGCCACTGCCAGcagcgtcgccgtcgccagttcaacagcagcagcagcagcagcagcaacagcagcagcaacagcaacagcagcagcagcaacagcagcagcagcagcagcagcaacagcaacagttgccaataTTGAAGCCAACACAGACATCGATCAGCAACGAAGCCATGGGCAAACCAACTGCATCAGTTGACACCAAACCGATGGAACAAACTATAACTGCAGCCGCttctgttgccgttgctgcaaCCGCTTCCGCTTCCGCCTGCACAACCGCTCCGGCAGCAGCTcccgtggcagcagcagcagcagcaggagcagcagcaacaaccacagtaACCAGCGTTGTGGGCAGCGCTAAtcctgcagcagctggagctgctaCAGCTGCTGTCACCGCTGTGCCCGTCGATGTCAATTGGCTGTTCATTTGCGACTGGCGCAACTGTCCGCGTCGCAAGTTTAAGTCGCTCAACGAGCTGCAGCATCATGTGTGCAATGTGCATTGTCCGGATCATTTGGATGCGGGCGCTGAGATCTATTGCCAATGGGGCAGCGGTCCCAGTTTGTGTGACAATATTGCGCGGAAACGTTACTCGCTGATGACGCATCTGGTGGATCGTCATTTGGCGCTGGACGATCTGCGTGCCAGCGTGCAGCGGCGCCTGGCAACGGGCATACACAATGTGGCGCCAACGCAGCCAACGGTCACAATTGTGCGGAATGCGGGCAGCAAtccagcggcaacagcagctgccacaacgacagcagcagcaggcacaggagcagcagcaactaccaacacaacaacagcagcaacaggcactGCTGTGGGCACATCCGCGTTGCAGGCAATCAAACGACACTCGGCTGACTTTCTCAACTCAAAGGAACTGATGGATGAGAACGAGGGACCCGTGACAAAGAGCATACGTCTAACAGCTGCATTGATACTGCGCAACCTGGTCAACTATACGTCGACGGCCAAACGTGGCCTTAAGCGCTATGAGCCACATTTGGCCAATGTGGCCTTCAGCAATGTGGAGGCCAGCGGCGTGCTCTCCCACATACTGCACGAGCTGAGCCAGTAG
Protein Sequence
MTSIDSVRVLLQSLPAASPSVGSNNNAQQNELTPAKLGSGATPLRARNTQFLQQQQQQAQQQLFYGTPEKSSSAGSGGGKQLNAPEEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDEVYSALDTLRERCVNGTAGIKHIYRRYLDKYERLNFFGEDPDKLEALEAAIECAELGASASRARSRALAGGGGVGGGIGLTGSGLGSIFGNVHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEPRPTLQLSECPKLLDVLLAHLGVYADYTMRQLFQHGHNTAGMQVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLISKDGDNSDELLLQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQENLTLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFDLLDPATDELSRNLLATLCEGIESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSGLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNMLPTMAQSMPSNQLTQMMTVKPTQAAPIAAALPPPAPAQVQVVAPQTEAISLPVVVPAPAAATAPVPAAAAVAVPATPTPTSVAVAVAVSLPMPSLPQVQLPVPSLPQVQLPPAVTQAMITSTPTPAPAAIVQAALLPPAPSAPQSFTHDDETYALAWLGATYERAGNGHDYRVEQQELYTIYLSHCQKAGKHSVVNRLQFPRLVRLIFNPSVGPAIVRQLDGTDLPGTHYIGIRMRAQPLPMQQHKATTATAGKKDATKPEAAVAEAQLEEVTAAPTPSSSLIKSLLANKVNERQLKQKAQSQPQPPALVATTAAVTGSAAGQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLALEKKPLTDSAPPPLAPLSGANVLTKDAQGRTLIIQSKRKLTIDEEQNKRLAMDSSGTGGKEEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAAQSNQEQLQQQPQQQQQQPQQQQQQLQLQQQQQPQMQLIPAKVQPAQRQLIFPAGTASAAPPQLKLATTATIKTDQGLQTVPVILQQKTEQQQQQQQPTQTQYVLATNQQGQTYLVAQQTAPVAAAPSVPATPTLLVTQTQPQHHNQQTKTIIILQQPPGVSTSNVPGTQKVIMTTAQGQQVLVTTTTAPAGAQPRPNAPSQVQQQQQQQPQQIFINPQRAVPTALGAGQMSPSLLSQLNQIPATIKLHQPQPGQTPQQQQLQQLQQLQRTKASAIPQLQQHQSIIQQHIISGPAAAATAAAATAVAAAVVDKRQILLGGIKETTLITQTPATAAPLQQSQLNSQTIITTQPPVATAQQQQQQQLLQQQHHPSIIQQKISLTEAGKSKAVTLALPVAKKQPLPAASPSPVQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLPILKPTQTSISNEAMGKPTASVDTKPMEQTITAAASVAVAATASASACTTAPAAAPVAAAAAAGAAATTTVTSVVGSANPAAAGAATAAVTAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDAGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVAPTQPTVTIVRNAGSNPAATAAATTTAAAGTGAAATTNTTTAATGTAVGTSALQAIKRHSADFLNSKELMDENEGPVTKSIRLTAALILRNLVNYTSTAKRGLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00528580;
90% Identity
-
80% Identity
-