Basic Information

Gene Symbol
Ubp1
Assembly
GCA_035042075.1
Location
JAWNLW010000593.1:2367859-2378864[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.32 2.7e+03 -2.7 1.3 109 132 28 51 22 79 0.63
2 3 4.3e-53 3.7e-49 166.9 0.2 22 190 397 562 378 572 0.89
3 3 1.8e-13 1.5e-09 37.4 0.6 188 222 638 672 628 673 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCGCAAAGTTCCGGCCTCTTGGATTTACAAAGCATATTTGATCCACAATATTcattgcaacaacatcagcaacaactctTACATTTAccatcgcaacaacaacaacaacagcagcaacaacagcagcaacatcaacaacaatcatcACGCATATCAACGAAATTTGATTTGAGCATTTTCAACGATTTTGACCAAATGgaattcaataacaatttaaatcgAAACCATAATCAATATCagaataatagcaataataataataataataataataaccacaataccaccaccaccaacaacaacaacaacaccttaCATACGCACCAGACCAACGGTGAAAATCTTAATCAGaTCCAAAATCGTCATTTTATCAGCGgctatcatcatcagcatatTGGATCGGATTATGAGCAAGTGATTAACTTTGTTGACTCACCGCCAAACTCGGAGGAATCTTGGACAGACGCACAGTCCAAGGAATCGCCAGGACCCCAAATAATTGACGTTAGGACAATTTACTCGAACAGCGGCACACGCAAAAGACGAATGGATTGGGACTCATTAGATATTGGTCAAAGTGAAAATACGCCGTCAACGCAAACTGGCGATATACCCAATAAGGTGGCCCATCACGAGAAAGAGAAGCACAAGCGTGAGAAGCACTCAGGTCGCAGCAGCTGGAGCGATGATATAGGCTTCGATCTGAACGCTGAGTTTAATAGCAACTCGTACTTGAACAATGAGAACTTTCTATCGTTCTCCCCGGGCCTGACGGCATTGAAACAGGAGCCGCAAACGGAGCAGCTTAAaccgaatccgaatccgaatgCAAAGGAAGCGAACAACTCATCAGCTGTGGTCAACATTGCCAAGATTGATAAATCGCCATTGGGTGACGCGAATCAATCACCACAGCGTGGCCAGGAGGCAGTGGTAAGTGCTGGAAGTGGCAACAAACATGAGTTGAACTCTGGCAAcatttgtggctgtggctcgCCGCAAGGCTCGCCCGTCGCAACGGACTTTGAACTGAATGGCAATGTCAAATCAGCTGAGAAACACAAATCAACAGCTGGCAATGAGGTCTATGCACATTCGCCACGCTCTggattgcagcagcaactgagcaTTGTCGATGAGGCCAAAATTGAGCCGAGCTCCTCAAGCGGTGCAGCTCATGCCGAGGATCATAAATTTCAATACATTTTGGCAGCGGCCACCTCAATTGCGACCAAGAACAATGAGGAGACTTTGACCTATCTGAATCAGGGTCAAAGCTATGAGatcaaattgaagaaaattGGAGATTTATCTTTCTATCGTGATAAGATTTTGAAGaGCGTTATCAAAATCTGTTTCCATGAGCGTCGCTTGCAATTTATGGAACGGGAGCAGATGCAACAATGGCAAGCCTCGCGTCCTGGCGATCGCATCATTGAGGTGGATGTGCCACTTTCGTATGGCTTGTGCCACGTGTCGCAGCCATTGAGTTCGAATGCATTGAATACGGTCGAGATATTTTGGGATCCATTGAAGGAGGTTGGTGTTTACATCAAGGTCAATTGCATATCAACTGAATTTACACCAAAGAAGCACGGCGGCGAAAAGGGTGTACCATTTCGACTACAAATTGAAACTTATATAgaaaattcaacaacaacaacaacaacaacagcagcagcagcagcaataacagcaaacagcggcaacaacagcagctcaagcagcagcagcagcaatagcaacagcagcagcagctgtgccaGCAACGCAACAACTAGCAAtaataactgcaacaacaacaacaacaacatatcaAACACATCACCCGGCACACCCGACAAtcgcaatggcagcagcaacattgccGCCGGACTTGCCACACTCAATGGCAAACAGGCGGTGCATGCAGCTGCCTGTCAGATTAAGGTATTCAAGCTAAAGGGCGCCGATCGTAAGCATAAACAAGATCGCGAAAAGATACAAAAGCGTCCACAGTCCGAGCAGGAGAAATTTCAGCCGAGCTACGAGTGCACCATAATGAATGATATTGCATTGGAGCTGataacgccaacaacaacaaccactggCTGTTACAGTCCCGAATATATGAAATTGTGGCCCAATTCACCGGTACATATACCAAAATACGATGGGATGTTACCCTTTACAAGCAGCGTATCACcggcaaacagcagcagcccaaTTGCCATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTATCGCCGCCACATGTGCCAGCGGATATGGATGATTATAATCAGAACATAATGCCGGAATCAACGCCCGCACAAGTGACACAATGGCTGACCAATCATCGTCTGACGTCCTATCTCACCACATTTGCCCACTTCTCTGGCGCTGACATTATGCGcatGTCCAAGGAGGATCTTATACAAATCTGTGGTCTGGCCGATGGCATACGCATGAATAATATTCTGCGCGCCAAAACCATTGCTCCAcgtctaacgctctatgccagCATGGATGGTTGCAGCTACAATGCCGTCTATTTGCTGTCGAACACGGCCAAGGAGTTGCAGCAGAAGCTATGCAAGTTGCCTGGTTTCTATGAGTTCATGGCCAAAGGCGGCTCAGCTGGCGCTTTGGAGAATGGTAGCACTATGTCAGCTGCCGCAGGACTCTACAACAATTGGGGCATGCATTCAAAGTACTCGGGCAGCGGCTCGAACATATTCAATGAGGTTAACAAGAGTTGTGTGTACATTACGGGACCATCGGGTGTACATGTGAATGTTACGGATGAGGTGCTCAACAATGAGATCAAGGACGGCAGTCTCTATGCCATGGATGTGCAGGCTGGCAAAgttattttgaaattgatcAACAAACAGGATAACAATTGA
Protein Sequence
MALSFLSQSSGLLDLQSIFDPQYSLQQHQQQLLHLPSQQQQQQQQQQQQHQQQSSRISTKFDLSIFNDFDQMEFNNNLNRNHNQYQNNSNNNNNNNNNHNTTTTNNNNNTLHTHQTNGENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTDAQSKESPGPQIIDVRTIYSNSGTRKRRMDWDSLDIGQSENTPSTQTGDIPNKVAHHEKEKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPGLTALKQEPQTEQLKPNPNPNAKEANNSSAVVNIAKIDKSPLGDANQSPQRGQEAVVSAGSGNKHELNSGNICGCGSPQGSPVATDFELNGNVKSAEKHKSTAGNEVYAHSPRSGLQQQLSIVDEAKIEPSSSSGAAHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSNALNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENSTTTTTTTAAAAAITANSGNNSSSSSSSSNSNSSSSCASNATTSNNNCNNNNNNISNTSPGTPDNRNGSSNIAAGLATLNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDIALELITPTTTTTGCYSPEYMKLWPNSPVHIPKYDGMLPFTSSVSPANSSSPIAINSVTSTNSPTLKLMDATNMVSPPHVPADMDDYNQNIMPESTPAQVTQWLTNHRLTSYLTTFAHFSGADIMRMSKEDLIQICGLADGIRMNNILRAKTIAPRLTLYASMDGCSYNAVYLLSNTAKELQQKLCKLPGFYEFMAKGGSAGALENGSTMSAAAGLYNNWGMHSKYSGSGSNIFNEVNKSCVYITGPSGVHVNVTDEVLNNEIKDGSLYAMDVQAGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00803364;
90% Identity
-
80% Identity
-