Basic Information

Insect: Drosophila lutescens
Gene Symbol: -
Assembly: GCA_037075285.1
Location: JBAMCF010000743.1:1690781-1693813[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00095 0.077 13.8 0.3 1 23 480 502 480 502 0.99

2 7 0.015 1.2 10.0 1.8 1 23 510 532 510 532 0.96

3 7 0.00094 0.076 13.8 0.7 1 23 541 563 541 563 0.98

4 7 4.3e-05 0.0035 18.0 0.2 3 23 633 653 631 653 0.97

5 7 0.00071 0.058 14.2 1.0 1 23 661 685 661 685 0.98

6 7 2.3e-07 1.9e-05 25.1 2.2 1 23 691 713 691 713 0.98

7 7 0.00024 0.019 15.7 0.1 1 23 719 741 719 741 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00095	0.077	13.8	0.3	1	23	480	502	480	502	0.99
2	7	0.015	1.2	10.0	1.8	1	23	510	532	510	532	0.96
3	7	0.00094	0.076	13.8	0.7	1	23	541	563	541	563	0.98
4	7	4.3e-05	0.0035	18.0	0.2	3	23	633	653	631	653	0.97
5	7	0.00071	0.058	14.2	1.0	1	23	661	685	661	685	0.98
6	7	2.3e-07	1.9e-05	25.1	2.2	1	23	691	713	691	713	0.98
7	7	0.00024	0.019	15.7	0.1	1	23	719	741	719	741	0.98

Sequence Information

Coding Sequence: ATGAGTGTCCTGGCGTATCCACGTACCAACGACGAGGAGGTTTTCCGTCACTGCACCAAGGACTGTGGCGTGGTGACGGCCACGGAGGACTTCCAGTACTTCGCCCTGCGATGCATCTTCTGCAGCGAGAAGTTCCTCTACTTCGACTCCTTCATCGGCCACATGCAGACGGCTCACCTGGGCGACCAGTCCGTGGCGAATCCCGCCTCCTCTTCCGCCTCCCGTCTGTCCTTCAATCTCGGCGACCCAATGTCCCTGTCCAGTCGCAACGGGGACCTGCCCAACTTCCACGAGATCGAAGACTTAACGGACGCGGACACGGCTCTGCTGGAGCCGCAGATGGTCATCAAACAAGAGCTGCAGGAGCTGCCCTGCAGCGACGATGATGTGGTCGCCgacgaggaggacgacgacgagcgCCGTCTGCGCGATTCCGATGCCggcgaggacgacgacgaggccATACTGCCCGAGAGCGATGTCCCGGTGGTCAGTTCCAAGCCGCGTCCACGCAAAAAGGTCACCAAGCAGCGCCAGAGAGACATCTCCAGCGAGGCACTCATCGCCGGCGACGGAGACTCCTCCCTGGACGACTACGGCGATCCGGACAACAGCTACATGGACGACAATTCCGCCGAGTACATGGACTACGGTGGCTTCGACGGCGTAAACCACAGTGGCTTCGGGCCCGAGTCGGATTTCATTAGCTATGACGAGATGGTGGAGGAGTCTCTGCTGGGACGCGACCGGGAGGTTACGATGCACATCAAGGACCGCAAGATGATCCAGTTCCTTATACACTCGTATCAGCGCAACCCCTTTCTGTGGGACCACGGCAACGCACAGTTCAGGGATCGCGTGAAGCGCGCCCGCTTCCTCGACTGGATTGTGCTGGAGTTTAAGAGCCGTTTCAACATCTCGCTGGCCAAGGACGCCATCACCCGAAAGTGGGACAACCTGCGGACGGTGTACAAGCGGGAGTGCAATCGCATGGCTCTGGAGAAGACGAACATCAGTACGCTGTGGTACTTCAAGGAGCTGCACTTCCTCAACGAGGTATACAGCTATAATGACAAGATGTCCGATGCCGTTGTAAAGGAAACCTCCTATCGCCGCCGCTTCTCGGCCATTTGGAACGACACGTCCACGGCCAAGCTGCTGAGCATGGTGAAGCGGTACCAGTGCTTTTACAATCGCTTCGATCCCGACTACCGCAGCAAGGAGCGGCGCGGCGAGGGACTCCACCAAATGGCCAttgagctgcagcagctgatCGACGTGACCACCATCCAGATCTCGAAACGCATCTCCCAGCTGCGCTTCGATTACTCCAGACAGAAGATGGAGCGTCTCAATAGCGAGCGCCTGGGCAAGAATTTCATTGCGAACTATATATACTATGATCAAATGCACTTCATGGACGACGATATACCGCCATTCAAGTGCCCGCACTGTCCGGAAATTGTGCAAACACTCAGGGAACTGGACCTCCATATGCTCACCCACCAGCCCAGTTTGGGTGGTGGATACTTCTGCAACATTTGCAGCATTCAGTTCCACAACGCCGAGGAGTTCGAAAGCCATAAGCAGTTGCATTTGGGCGGCGTAGCCGAGGTGAAGTTCAACTGCGAACTGTGCACGGCCAGTTTCCGGGAGAAGGCCAACTACGATGAGCACCTGCGGCGGCATAACGAGGAGCTGTTCCTGCCCTCGCTGGCGCTCAATCACAGCATCATGGAGGGCGGTGCAGGGGATGACGAGACCGGAGCTGAAGGCGAGGAATCCAGGGGCAGCGGAACCCGACGAAGAAAGACGAAGGCTTCCAAGTCACCCGCAGACATTGCGGATGATGAAGATCCAATGGGCGGAGGCAGCGACATTGCCAAGCCGTATGGATGCGATGTGTGCCGTCGAAGCTTTGCCACGCCGGGCCATCTGAATGCCCATCGAATTGTCCACCAGGATGAGCGGGAGCGGTGCTACAAATGCGACTATCCCCAGTGCAATAAATCGTTTGTGGCGCGCAACAGCCTGTTTGAGCACCTGAAGCAGCACTACAGCAACGAGGAGTTCAAGTGTGACATCTGCGGCAAGACGTTCAAGTCGACGAAGAATCTGCAGAACCACAAGCAGATCCACGACAAGGTCAAGCGCTATGTCTGCCAGATCTGCGGATCGGCGTTCGCCCAGGCGGCCGGTCTCTATCTGCACAAGCGTCGGCACAATCGACCCAATGGAGCCGTCGGCGCTGTTGGGCGATCGGGTCGTAGCAGTCTGTGA
Protein Sequence: MSVLAYPRTNDEEVFRHCTKDCGVVTATEDFQYFALRCIFCSEKFLYFDSFIGHMQTAHLGDQSVANPASSSASRLSFNLGDPMSLSSRNGDLPNFHEIEDLTDADTALLEPQMVIKQELQELPCSDDDVVADEEDDDERRLRDSDAGEDDDEAILPESDVPVVSSKPRPRKKVTKQRQRDISSEALIAGDGDSSLDDYGDPDNSYMDDNSAEYMDYGGFDGVNHSGFGPESDFISYDEMVEESLLGRDREVTMHIKDRKMIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDWIVLEFKSRFNISLAKDAITRKWDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYNDKMSDAVVKETSYRRRFSAIWNDTSTAKLLSMVKRYQCFYNRFDPDYRSKERRGEGLHQMAIELQQLIDVTTIQISKRISQLRFDYSRQKMERLNSERLGKNFIANYIYYDQMHFMDDDIPPFKCPHCPEIVQTLRELDLHMLTHQPSLGGGYFCNICSIQFHNAEEFESHKQLHLGGVAEVKFNCELCTASFREKANYDEHLRRHNEELFLPSLALNHSIMEGGAGDDETGAEGEESRGSGTRRRKTKASKSPADIADDEDPMGGGSDIAKPYGCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKVKRYVCQICGSAFAQAAGLYLHKRRHNRPNGAVGAVGRSGRSSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00486859;
90% Identity: iTF_00565600;
80% Identity: -