Dlut009499.1
Basic Information
- Insect
- Drosophila lutescens
- Gene Symbol
- -
- Assembly
- GCA_037075285.1
- Location
- JBAMCF010000469.1:1122795-1124434[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7e-16 5.3e-13 48.7 0.0 2 45 352 395 351 395 0.95 2 3 0.048 96 3.1 0.0 28 37 425 434 420 439 0.89 3 3 5.1e-20 1e-16 60.6 0.0 2 42 461 501 460 503 0.95
Sequence Information
- Coding Sequence
- ATGAATCACCTCAAGTGGATGGGACACTCGTCCACGATAATGGACATCCAACGCTCGCTGCGCAACGACAACCAGAACTGCGAGGTGGTCCTAGCCTCCAGAGACGGCGTCCGGGTGCGCGCCCATCTCTTCGTGCTGAGCACCTGCAGCGAGCTGATGCGCAACATCCTGGTGGATGTGCCGCGTGGCCAGGAGGCCACCATTGTGCTGCCCGACATCCGAGGCGATCTGCTTGAGAGCATGCTCTCCTTCATCTACATGGGCGAAACGAGTCTGCCCTCCGCCTCGCTCTCCGAGTTCCTAGAGGCCATCAACCTGCTGGGCATCAAGTCGGCCATCAGTTTCGAGTGCAACCCCTCGGCCAGTCCACCCAGCGGCGATGTGGAGAACGGTACGTTGGCCGTGGAGACGGCCAAGTCGATCACAGGACTGCAGATCGCCGAGGCGGAGCTGctggacgacgaggaggagccaCAGCCGACGGTCACCGTGCCGGCCTCTGTCCTGGCGGAGTCACAGCATCAGGCCAGCCACTCTAGCCGCTCGCTGGAGTATCTGGATGTCTACGAGCCGCCAAAGATCACCTACTCCATCGAACACATGGACGGCAACTCCAGCGGCAATCAGTTTATTCTCACCGAGAACACGGGCACCTTCACCATCACACAGTCGGCGTCCAGTTTGTCCAAGATGGGAGGCGACGATACGGCCACCAGTGGTGCCGAAGTGGAGCTGGTGGACGATGATGTGGAGGCGGACATTGCCGAGGAGGATTCCGAGGAGCACGAAACACAGATGATCGAGGAGGACTTTACGCCAACCGATCCACTGATCGAGCTGGGCACCGCCACCGAAatggacgacgacgaggaggacgtGACCGGCGAGCTGATGGACGAGGATATCGAGGAAGAAGAGAAGCCACGCAAGTTGGGCGGCGGAAAGCCGCGTGGCCGTCGCCCCATGAACATCAAGAGCGAGAAGCGATCGCCGCACAAGCCATCGCGACTCCAGCAGTTTGTGGCGCTCAAGCGGGAGGTTAAAGACGATATCAACGACGCTTTGGATCTGGCGGCGGATGCAGTGATCCTGGAGGGATTGAGCCTGCAGAAGGCCGCCGACCGGTTCGACATCTCCAAGACGGTGCTGTGGCGTCGCGTGCGCACCAATCCCGCCTACATGCGCAACAACCGGGAGAGACCATCACTGCTCGAGGCCTACGAGCGACTGAAGAACGGCGATTCACTTAAGAGCATCAGCACGGAGCTGCAAATCCCCATGTCCACGTTGCACCGGCACAAGGTGCGCCTGTCGGCCCAGGGACGCTTGCCCGACTTTGTGGCCTGCCGGCGGCGAGACAGTACGCCCAAGGATGAGCTACGGGACAAACTGGCCAAGGCCGTGCATGCTTGCCTCAACGAAGGAATGTCCCAGAACCACGCGGCCAATCTGTTCGAGATCCCCAAGAGCACGCTCTGGCGACACCTGCAGCGACGCATGTCCAACCAGGACCGGAAGGTCAAGAAGGAGCTGAAGGACGAGTACGAGGACGATCTGCTAAACTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRSLRNDNQNCEVVLASRDGVRVRAHLFVLSTCSELMRNILVDVPRGQEATIVLPDIRGDLLESMLSFIYMGETSLPSASLSEFLEAINLLGIKSAISFECNPSASPPSGDVENGTLAVETAKSITGLQIAEAELLDDEEEPQPTVTVPASVLAESQHQASHSSRSLEYLDVYEPPKITYSIEHMDGNSSGNQFILTENTGTFTITQSASSLSKMGGDDTATSGAEVELVDDDVEADIAEEDSEEHETQMIEEDFTPTDPLIELGTATEMDDDEEDVTGELMDEDIEEEEKPRKLGGGKPRGRRPMNIKSEKRSPHKPSRLQQFVALKREVKDDINDALDLAADAVILEGLSLQKAADRFDISKTVLWRRVRTNPAYMRNNRERPSLLEAYERLKNGDSLKSISTELQIPMSTLHRHKVRLSAQGRLPDFVACRRRDSTPKDELRDKLAKAVHACLNEGMSQNHAANLFEIPKSTLWRHLQRRMSNQDRKVKKELKDEYEDDLLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00605685;
- 90% Identity
- iTF_00605685;
- 80% Identity
- iTF_00536880;