Basic Information

Insect: Drosophila lowei
Gene Symbol: ham
Assembly: GCA_008121275.1
Location: CM017779.1:22554420-22556117[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.5e-06 0.003 17.4 0.3 12 41 308 334 303 336 0.84

2 3 9.3e-06 0.019 14.9 2.1 17 44 341 365 334 365 0.88

3 3 0.037 75 3.3 1.4 18 41 371 391 365 394 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.5e-06	0.003	17.4	0.3	12	41	308	334	303	336	0.84
2	3	9.3e-06	0.019	14.9	2.1	17	44	341	365	334	365	0.88
3	3	0.037	75	3.3	1.4	18	41	371	391	365	394	0.86

Sequence Information

Coding Sequence: ATGAGAGAGAAAGACCACTCACCAAGAAAGATGCTTCCTAGCCCGAAACAGGGCTGCGTTTACCCTGCCTTAGGATTAGTACCCACATCGTATATATCACACGTACCTTACGACCTGGCAGCCGCCTCGACGatatcctcctcctcctcctccgcctcctcggCGACGACGACCACCACGACGGCGGCGGCCCGGCAGCAGCATCTGCATCCGCAGCAGCTCCATCATGGCGGCAAGGCcaagaggaggagcagctaTGACCAGCCGCTGGATCTGCGGCTGGCCCACAAGCGGAAGACGGATCTGGATCCGTCCATGGACGGAGGTCCCATGGAGGACGAGAACAGCAACCTAATCATGTTCGCCAGCGAACTAGCCGCCGCccagcagaaggagaaggagctgaACAACAACCACATAGCCGCCTCCCTGGCGGATCTCGGCTTCGACATGAGCCGCAAGATGCTGCGAGCCCTAAGGGAGGGTGGAGCAGGCAGCGGGGCAGCTGGGCCTGCCACACCGCTGGGTGCCGTGCCGCCGCAGTGCACGGTGCCCGCAGTGCATCCCACGCTCCTCGAGGCCATGACCAAGACGCTGCCACTGCAGTACAGGAATGTCTTTGCGGGTGTGCTACCGGGAAAGGCCAGCACTGCGGCTGCCTCCACGAGCCCCACGGGCGGCGAGTTCCCCTTCCGGCATCCGCTGAAGAAATGCGAGCTGACATGGCCCCCGCCCACGGAGCAATTGCAGCTGGAActgccaggaggaggaggcggtaTGGGAACTCCCAGCGGCGGAAAGACGGCTCCACATCCCCAGCTGCAGGACTACCAGACGCGCCAGCATTCGCGGAAGGCCAAGGCAAGAGCTCCAGCGTCCACAGGTGCCCAGGCTGGCCCAGGAGCCGCCTCCCTGCCGCAGCGGAACAAGGATCGGTACACCTGCAAGTTCTGCGGCAAGGTGTTCCCCCGATCCGCAAACCTCACGCGCCACCTGCGCACTCACACGGGCGAGCAGCCGTACAAGTGCAAATACTGCGAACGTTCCTTCAGCATCTCCTCGAACCTGCAGCGCCACGTGCGGAACATCCACAACAAGGAGCGGCCCTTCAAGTGCGAGATCTGCGAGCGCTGCTTCGGCCAGCAGACGAATCTTGACCGGCACCTGAAGAAGCACGAATCGGACGCGGTGTCGCTGAGTGCCTTGAGCGGGGTGAGCGAACGGATGCACTGCATCCGACGCTTCTGCGAGAACCCCAGCGAGGAGTCCTACTTTGAGGAGATCCGCACCTTCATGGGGAAGgtcacccagcagcagcagcagcaacagcagcagcatcaccagcagcagcagaaccatCATCAGTCAGTGACCACGCCCCGTAGCTCGGCCTCCAGCTCGTGCTCCTCCTCGCATACGCCCACATCCTCGCGCCACACACCCACGCAGTCGGACACATCGGAGGCCCTGGCCCAAGAGCTGCGGCGCCTGCAGGCGGAACGTATCAAAGTCGGTGAAGACAGCAATGATGCAACATCAGGAGCAGCGAGAACTGCCTCCCCAGCGGCCGAGGAGGAAGACTCCAAGCCCATCCTGGAGCTGAAGAAGACCCTGACTTCAAAGCTATTTCCCACTACCACACCGAAAGCTacgccagctgctgctgctgtcaccgtgaaggaggagcagcagccctAA
Protein Sequence: MREKDHSPRKMLPSPKQGCVYPALGLVPTSYISHVPYDLAAASTISSSSSSASSATTTTTTAAARQQHLHPQQLHHGGKAKRRSSYDQPLDLRLAHKRKTDLDPSMDGGPMEDENSNLIMFASELAAAQQKEKELNNNHIAASLADLGFDMSRKMLRALREGGAGSGAAGPATPLGAVPPQCTVPAVHPTLLEAMTKTLPLQYRNVFAGVLPGKASTAAASTSPTGGEFPFRHPLKKCELTWPPPTEQLQLELPGGGGGMGTPSGGKTAPHPQLQDYQTRQHSRKAKARAPASTGAQAGPGAASLPQRNKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVSLSALSGVSERMHCIRRFCENPSEESYFEEIRTFMGKVTQQQQQQQQQHHQQQQNHHQSVTTPRSSASSSCSSSHTPTSSRHTPTQSDTSEALAQELRRLQAERIKVGEDSNDATSGAARTASPAAEEEDSKPILELKKTLTSKLFPTTTPKATPAAAAVTVKEEQQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00574964;
90% Identity: iTF_00471772;
80% Identity: iTF_00536296;