Dlow007560.1
Basic Information
- Insect
- Drosophila lowei
- Gene Symbol
- kn
- Assembly
- GCA_008121275.1
- Location
- CM017778.1:7534271-7560165[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-233 3e-229 762.0 0.0 41 384 97 469 90 473 0.99 2 2 2.3e-08 0.00036 18.8 15.0 422 523 474 575 469 591 0.72
Sequence Information
- Coding Sequence
- ATGTTCGCGCCGAGAAGAAGTGCGCGAGTTGCCCAAATCGAAAGCGAGATGACAGCGGGCTTTGGCCATTCAGCGGCGGCAAATCAACAATcgcacacgaacacacacacccactccCAACACAGTCACACGCATAATCACAATCATAATCACACTCTCAATCACAATCaaagtcagagtcagagtctgAATCAGACGCTGCAGCGACCCACAGACAATCTTAATCTCAATCTTAATCAGGATCATAATCACAATCAAACGCAAAACAATCCAAAAACAATGCGCTGTGAAACGAGCTTGGGCATTGGCCGCGCCCACTTTGAGAAGCAGCCGCCCAGCAATTTACGTAAATCGAACTTCTTTCACTTTGTGATCGCCCTGTACGACCGGGCCGGGCAGCCCATCGAGATCGAGCGCACGGCCTTCATTGGGTTCATCGAGAAGGACTCGGAATCGGATGccaccaaaaccaacaacggGATACAATATCGCCTGCAGTTGCTCTATGCGAATGGCGCCCGCCAGGAGCAGGACATATTCGTGAGGCTGATCGATTCCGTGACCAAGCAGGCCATCATCTATGAGGGTCAGGACAAGAATCCAGAGATGTGTCGGGTCCTATTGACGCACGAAGTCATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGCAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGGTTCTTCCTCAAGTTCTTCTTGAAGTGCAATCAGAACTGCCTGAAAAACGCGGGCAACCCGCGGGACATGCGCAGATTCCAGGTGGTCATCTCCACACAGGTGGCCGTGGACGGACCCCTGCTGGCCATCTCCGACAACATGTTCGTGCACAACAACTCGAAGCACGGACGGAGGGCCAAGCGGCTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCGCCCCTGCCGGTGGCCACGCCCTGCATCAAGGCGATCTCCCCGAGCGAGGGCTGGACCACGGGCGGCGCCACGGTCATCATTGTGGGCGACAACTTCTTCGACGGCCTCCAGGTGGTCTTCGGGACGATGCTCGTGTGGAGCGAGCTGATTACCTCGCACGCCATCCGCGTCCAGACCCCGCCCAGGCATATACCCGGCGTCGTTGAGGTGACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAGGGATCGCCCGGACGCTTCGTCTATGTCTCAGCTCTCAACGAACCCACAATCGACTACGGATTTCAGCGCCTGCAGAAGCTCATTCCACGCCACCCCGGCGATCCGGAGAAGCTGCAGAAGGAAATCATATTGAAGCGGGCCGCCGACCTGGTCGAGGCCCTTTACTCAATGCCCAGCAGATCTCCGGGCGGCTCCACCGGCTTCAACTCCTATGCCGGACAGCTGGCCGTCAGCGTCCAAGACGGCACCGGCCAGTGGACCGAGGACGACTACCAGCGCGCCCAGTCGAGCAGCGTGAGTCCACGCGGCGGCTACTGCAGCAGCGCCTCCACCCCCCACAGCTCGGGCGGCTCCTACGGAACCTCGGCCACCACAGCGGCGGTGGCAGCCACTGCCAATGGCTATGCGCCCACACCCAACATGGGCACCCTCTCCTCCTCGCCGGGCAGCGTCTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGCTCGTGCAGCATCATCATGTGGCCGCCGCCCATCCGCACCACTATCCGCATCCGCACCACCAGCCGTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTAA
- Protein Sequence
- MFAPRRSARVAQIESEMTAGFGHSAAANQQSHTNTHTHSQHSHTHNHNHNHTLNHNQSQSQSLNQTLQRPTDNLNLNLNQDHNHNQTQNNPKTMRCETSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTSATTAAVAATANGYAPTPNMGTLSSSPGSVFNSTSMSAVSSTWHQALVQHHHVAAAHPHHYPHPHHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -