Basic Information

Insect: Drosophila longiperda
Gene Symbol: Znf574
Assembly: GCA_035042125.1
Location: JAWNLV010000107.1:15034116-15036392[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.035 2.3 8.8 0.4 2 23 340 362 339 362 0.96

2 10 3.2 2.2e+02 2.6 0.2 6 23 372 389 372 389 0.97

3 10 0.001 0.069 13.6 0.1 1 23 395 417 395 417 0.94

4 10 1.1e-05 0.00073 19.8 0.3 1 23 430 453 430 453 0.97

5 10 0.00012 0.0083 16.5 1.2 1 23 461 484 461 484 0.97

6 10 2e-05 0.0013 19.0 1.1 3 23 492 513 490 513 0.92

7 10 0.001 0.07 13.6 0.5 2 23 525 547 524 547 0.97

8 10 3.9e-05 0.0026 18.1 3.6 1 23 554 577 554 577 0.93

9 10 2.5e-06 0.00017 21.8 1.2 1 23 583 605 583 605 0.98

10 10 6e-05 0.004 17.5 1.4 1 23 611 634 611 634 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.035	2.3	8.8	0.4	2	23	340	362	339	362	0.96
2	10	3.2	2.2e+02	2.6	0.2	6	23	372	389	372	389	0.97
3	10	0.001	0.069	13.6	0.1	1	23	395	417	395	417	0.94
4	10	1.1e-05	0.00073	19.8	0.3	1	23	430	453	430	453	0.97
5	10	0.00012	0.0083	16.5	1.2	1	23	461	484	461	484	0.97
6	10	2e-05	0.0013	19.0	1.1	3	23	492	513	490	513	0.92
7	10	0.001	0.07	13.6	0.5	2	23	525	547	524	547	0.97
8	10	3.9e-05	0.0026	18.1	3.6	1	23	554	577	554	577	0.93
9	10	2.5e-06	0.00017	21.8	1.2	1	23	583	605	583	605	0.98
10	10	6e-05	0.004	17.5	1.4	1	23	611	634	611	634	0.97

Sequence Information

Coding Sequence: ATGGCAGCCTGTGTGCTATGTTTCGACTGCTGCAAGAGCGGCGAGtcgtacaaaatattttccgAGGCCGGAATGCGGCtcaaaatttgcaaaacaataaacaaacatttttggctgGAGTTGAGTAGCGCAGCGGGAAGCGAACGCGAGGAAATTTGTCACCAGTGCTGGCAGGTCGTGAGCAACTTTAACAAACTATACGAGCGCGTCTACAACTTGCACCAGGAGCGCCTCTGTGATGTAAAGAACGTGACGATTGAGTTCTGTGACGAGGCGGAGGCAGCGAATCCGCTAGCCTTTGGCGGTGAATTGGATGCACTGGCCGAGGATTTCTTTGCGTCCGGCGATGTCAAGGTGGAGGTGAACGAACTGGAACCGCTGCCCAAGCTCGAAATGCTCGATGAGCCAGTGGTCGAGGAGCACAGCAGGGTATCCAAACATGCCAATGTCGAACGTTCAGCTACTAAGAGGCGCATCAAAAATGAGCTGCTCAGAATCTCCAGTGACTCGGATGGGGACATTCCCCTAGCCGAGTTCCTTGATCTGAAAACTACTGCAAAGCCAGTaggacaagcagcagcagtatcgCCGCTCATTGGACGACAGTTGCGTAGAAGCACTCGACGTGGTCGCCGAGAGAAAACCCCATCGGAATCTCCTGCAACCAGTCTGAAAAGAGAATCGGAATCTGATGAGGCTGAAcctgatggtgatgatgaaaataatgataatgatcaTGATATGGATTTTGTGGCCGCAGAAGCAGTGCTGGGCACTGAGGACAGTGCCAGTTCCAGCGagagcagcgacagcgactcTGGCGACAGTCTGCCCGATGTCGAGCCGGAGGAGCGCTATGCGGAGATACCCAAACGGGTTGTAGTCAAGCCTAAAAAGTATCGAAAGCGTCCCAAGCCACTGGTGGCACCGGTGCGCATGAGTCGCGATGATCTCGCCAAGCGACGagagcaacaaaagaaatacgATGAGattatatttgagtttttcaaGAAGCTGCCATGTCACGTATGCAATCTGTTAGTGCCCAATTTCGGAGACATGCGTCGCCATCTGCGCATGTCTCACAATATCGAAAGTGGCTTCATTGCCTGCTGTGGTCGCAAGTTTCACATACGCAGAGGTCTGGCCGAGCATGTACTGGTCCATAATAACCCGGATCACTTTATGTGCGCTCCGTGCGGTCGCGTCTTTCAGGACTCCAAGACGCTGGAGGCGCATGAACAAACGCACACGAATCCCCTGGCGGATGCGAAGGACAAACGCATTTATCCGTGCGACAAATGTCCGAAGACCTTCACCACAAAGGCCGCTGTCGAGTATCACATCATGTCCAAACATGTGCCCAAGTCGGACTTTAAATACACCTGCCCCGAATGTAATAAGAAGCTGCCCACAGAGCGAAAGCTGAAGGAGCATCGACGATATATGCACGATCCGGAGACGGCAATCATTTGTGACAAGTGCGGCAAAACGCTGCGTACCCAGGCCAATCTTAAAAAACACCACGAACTGGAGCATTCCGATGAGCCACGCCCCAAACCTGATCCGGTGCAGTGCGAGATATGCGGCACATGGTTGCGCCATTTATCCGGCCTCAAGCAGCACATGAAAACGGTGCATGAACCGCCGTGTGGCGAGCACCGCTGTCCCATCTGCGATAAGACATCGACTAACTCCCGAGCACTCAAGCGGCACATTTACCACAATCATCAGTGCGAGAGAAAGTTCCGCTGCACCATGTGCGAGAAGGCCTTCAAGAGGCCACAGGATTTGAGAGAGCACACATCGACGCACACGGGCGAGGTATTGTACACCTGTCCCAACTGTCCGCAGACGTTCTTCTCAAATGCCAACATGTACAAGCATCGCCAGCGATTACATCGCGCCGAATGGGAGGCGGATCGTAAGAAACCACTGCCACCTAACATAATGCAACAGGCAGCCATGAAAAAGCGACAGGGCAGCAAGGCTGCCGCCCCAACGCTCTTCCCCCAATCCACAGAGCCGCCAACTGTACCAGCTGCCCAGAAGCTGGaaccgcaacaacagccacaagcacaaatacaacaacaattgcattaa
Protein Sequence: MAACVLCFDCCKSGESYKIFSEAGMRLKICKTINKHFWLELSSAAGSEREEICHQCWQVVSNFNKLYERVYNLHQERLCDVKNVTIEFCDEAEAANPLAFGGELDALAEDFFASGDVKVEVNELEPLPKLEMLDEPVVEEHSRVSKHANVERSATKRRIKNELLRISSDSDGDIPLAEFLDLKTTAKPVGQAAAVSPLIGRQLRRSTRRGRREKTPSESPATSLKRESESDEAEPDGDDENNDNDHDMDFVAAEAVLGTEDSASSSESSDSDSGDSLPDVEPEERYAEIPKRVVVKPKKYRKRPKPLVAPVRMSRDDLAKRREQQKKYDEIIFEFFKKLPCHVCNLLVPNFGDMRRHLRMSHNIESGFIACCGRKFHIRRGLAEHVLVHNNPDHFMCAPCGRVFQDSKTLEAHEQTHTNPLADAKDKRIYPCDKCPKTFTTKAAVEYHIMSKHVPKSDFKYTCPECNKKLPTERKLKEHRRYMHDPETAIICDKCGKTLRTQANLKKHHELEHSDEPRPKPDPVQCEICGTWLRHLSGLKQHMKTVHEPPCGEHRCPICDKTSTNSRALKRHIYHNHQCERKFRCTMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPQTFFSNANMYKHRQRLHRAEWEADRKKPLPPNIMQQAAMKKRQGSKAAAPTLFPQSTEPPTVPAAQKLEPQQQPQAQIQQQLH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00508523;
90% Identity: iTF_00616353;
80% Identity: -