Dlon003353.1
Basic Information
- Insect
- Drosophila longiperda
- Gene Symbol
- Csrnp3
- Assembly
- GCA_035042125.1
- Location
- JAWNLV010000036.1:1985416-1990325[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.073 1.3e+03 -0.9 1.3 74 104 50 80 29 103 0.47 2 3 0.12 2.1e+03 -1.6 0.7 78 109 147 178 121 191 0.70 3 3 1.5e-99 2.6e-95 318.4 15.1 2 218 306 524 305 524 0.92
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATCAAGAAGATATTCACGTACATTCAGAAAAATGCAAGCACTGGAACAATGTTTGGGACAACAGCAAGCAGCATAATAAAGCCGGAGGATGAAATCAACACAAGCAGCAATCAACTTGAGCAGGCAGAgaaactggagctggagcagcagctgccactggAGCAGGAGGCGAAGgcggagcagcaacaacaagaactggATGATGAGGACATTGAGcgtcaaataaaaacatcgaTCATTGATGCGAGCAAGGTACATGCGGCAAAGGCGAAACTTGTGTTGCCCCTCCAACTGCAGCTGGACGATGAACTGGCGGACTTTGCGCACGAACCGCTGGCAATTGCCGAGCTGGAAGAACAGTTTCTTGAACTGGACAATTTTCCTAACAATGAGATTATTGTGTTGAGCGAACAAGATCTAAACTCATCGCTTGCCTCCGACAACATATCCGAGGATCCCCTGGCCATAGATGACTACGCCCAAAAGGAGGCCgatgacgaggaggaggacgaaGAACAAGCGGACAGCAGCGGCGATCTGCTTTGGCTCAAATTGGACACACCAAATGATCAGCtaaacatcagcagcagcagcgctatTCCCGTAGCAGGCTGCAGTAGCTCATCCTCAGCAGCGGCTGCAACAGCGGGCACAGTTGTCAAGCCACCCACCAGGCGTCGAGAGGAGGAGCTACGCAGCGATGCTGGCTCCGATTCGGGTCTGGGCGGTGAAAACGAcagacaaaacacaacaacaacaacggcagccaCAATGACAACAGCGACGAGCCTGCAGAAGCCGATGCGCTCAAATTTGAAGCGTCGTCTGGATGATGATACCATGGAACTAGAACTGCTGCCAATCACGAGCTGCTCGTCGACAACACAGAAGCGTCCCAAGCGTAGCATTAATTTCGATAATGTTAAGATCTACTATTTTCCACGGCAACAGGGCTTTGGCTGTGTGCCAACCGCCGGCGGCTGTACGCTGGGCATGGGCGCTCGGCATATTGCTTTTAAGACGATGACGCTGGCGGAACATGCATCCGAGCTGCGTCGCGCCCATCGCAGCCAGAATCAggaacatcagcaacagcaacaacagcagcaggcgcagcagcaacagcaactgcagcaggcgCGTGGCTCCAGCAGCGATGATAGCGAAGAGTCCGAGGAGGATTATTTGAGCGAGGGCAGCGGCTCCGATGCCGACGATGGCTCCAATGGCTTTCTGCAGCCGGTGACGCCCAAGCAGCGACGTGTCCTGCTGAAGGCGGCAGGTGTGCGCAAGATCGATGCCAGCGAGAAGATCGATTGCCGCGACATACGTAATTCGCGCGAGGTCTGTGGTTGCTCGTGTCGCGAATTCTGCGATCCGGAGACGTGTGCCTGCAGCCAGGCGGGCATCAAATGTCAAGTGGATCGCGCCATGTTCCCCTGCGGCTGTTCGCGCGAGGCATGCGGCAATACCATCGGCCGCGTCGAATTCAATCCTACACGTGTGCGCACCCATTACATACACACTGTCATGCGGCTGGACATGGAGCAGCGCCAGAGCCAGGCACACTCCTCGGCGGCGAACAGTGGAAgtgtcagcagcagcgtgGGCAATAGTTTGCTctatggcagcagcagcgtctccgacaacagcagcacggCGGtggcagccgctgctgcagttgctgttgctgcttcctCTACGCACTGTTTCTTCATGCAGCCGCAGTCGAACTACAGCTCCGGCTATGCCTCGCCAGCCTACACGCCCGAGCCGAGCGTCAGCTactatcagcagcaacagcagcagacgccGCAGACCTCGCCTGGTTCCACGACAAATGGCAACGCGACGCAGCAGCAGTCCAGCTATGCGACAATCTATCCACAATTGGACAGTCTCGATTCGGGCCTATTTGCCGCCGGCAGCAATGCCACGCCCTCCTACGGTGAGCTACTAACGCCCACCTTTCATCAGACCCTCAGCTATGGCGGCAACCAGcTCAACACTTACAACGGTTATCAGCAGACGACCACAAGTACAGGAGGTGGCATTGCAGCGACCATTGGTGGCTATAGTTCGTGTGCTGTGCCATCTGTGCCGCCGTTTGGCAATGCCACAACCACCGCCTCGAATGCGACGCAATATCAGAATGCGACTGCGTTAGGAACGACAGCCGCCACAATGAatagcatcagcaacagcagcagcatatccATAACGGCCAGCAGCTGTGCCACCGGCTTGGCTCGCGTCGGTGTTGGTAGTGTTGGCGCTGGCCCCGTGGATTTTGTCAGCCTGAATGGGCCCATTGGCAGCTCGTCGCGCCTGTCGCAGATCAACGATCTGTTGCAGCACAATCGTAATACCACCGTCGCTTTGGTTGCCGTCTCAGAGAGCTATACGGCTGTGCGGAGCAGCAGTAGCACCAGTGGCAGCGCAACTACCATCAACACAAGCACCACCATCGATTCAATCGACACACCGCCCATTGTGGAGGAGTCGCAGCGCAGTTGCATGACCTTCGAGGGTCTGCCACCGCCACTAATCAATCCCACGCCAATTGTCGCCGTTCTCgatcagcagccgcagcacaAACAGCtaatgggcgtggcaacaaCGCCACAGGCACGCCAGCCGCTGGATACCAGCGCCAGTCTAGCCGAGTCCTTACCGAGCAGCACCAACTAA
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASTGTMFGTTASSIIKPEDEINTSSNQLEQAEKLELEQQLPLEQEAKAEQQQQELDDEDIERQIKTSIIDASKVHAAKAKLVLPLQLQLDDELADFAHEPLAIAELEEQFLELDNFPNNEIIVLSEQDLNSSLASDNISEDPLAIDDYAQKEADDEEEDEEQADSSGDLLWLKLDTPNDQLNISSSSAIPVAGCSSSSSAAAATAGTVVKPPTRRREEELRSDAGSDSGLGGENDRQNTTTTTAATMTTATSLQKPMRSNLKRRLDDDTMELELLPITSCSSTTQKRPKRSINFDNVKIYYFPRQQGFGCVPTAGGCTLGMGARHIAFKTMTLAEHASELRRAHRSQNQEHQQQQQQQQAQQQQQLQQARGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRVLLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCSREACGNTIGRVEFNPTRVRTHYIHTVMRLDMEQRQSQAHSSAANSGSVSSSVGNSLLYGSSSVSDNSSTAVAAAAAVAVAASSTHCFFMQPQSNYSSGYASPAYTPEPSVSYYQQQQQQTPQTSPGSTTNGNATQQQSSYATIYPQLDSLDSGLFAAGSNATPSYGELLTPTFHQTLSYGGNQLNTYNGYQQTTTSTGGGIAATIGGYSSCAVPSVPPFGNATTTASNATQYQNATALGTTAATMNSISNSSSISITASSCATGLARVGVGSVGAGPVDFVSLNGPIGSSSRLSQINDLLQHNRNTTVALVAVSESYTAVRSSSSTSGSATTINTSTTIDSIDTPPIVEESQRSCMTFEGLPPPLINPTPIVAVLDQQPQHKQLMGVATTPQARQPLDTSASLAESLPSSTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00570381;
- 90% Identity
- iTF_00500296;
- 80% Identity
- -