Dlon012728.1
Basic Information
- Insect
- Drosophila longiperda
- Gene Symbol
- par-6
- Assembly
- GCA_035042125.1
- Location
- JAWNLV010000136.1:472895-474805[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-05 0.56 9.9 0.0 29 89 50 115 38 120 0.78 2 2 7.2e-05 0.63 9.8 0.0 29 89 270 335 253 340 0.78
Sequence Information
- Coding Sequence
- ATGGCCGTGGTGGCCGAGGCGTACAAGGGCTGCAAAACTGTCGGTCGTGTCGGTTTGGCCCTGTTGCGCAATGATGTCGGTGCCCCTCAGCTAATGGTGTACAAGAACGGGGCGAAGGTGCTCagccggctgctgctgaccatATCGACAGAATCATCTCAGCCACGCTTCGGCGACTGTGTAGTGATAAAGCGGCaaacatatttgcaattcTTTGACGATGAGCACTGCTTCTGGAGACCGCACATTGAACAGGCTAAAGACGACGAGCAGTTTCCAGAGGCGCTGACAAAACTGGGCATAAATCAGAATGAACCAGTCCGAGCGAGCAACGATGACAGCGAAAGCAAGTCCACACAATACGGCGACGATATTATCACCTCAGCAccagccccagccccagccACCAAGGCGCTGATAAAAAGTTGCATTGCTTTCGCATCGCTCATCGAGCAACTGCACAAACTGGCCATCATACAGTTTATAAAACAATCCGCGCGACAACGATCTGTTGCCCATCAACAACGATGGCAACTTTGGGCGTGCACTGAAAACGGCACGCCCGCTACTGCGCGTCATTGTCCAGCGCAAAGACGATCTGAACGACCGCAGTCGGAGCagaagctgcagcaactgAGTGTCGTGAACTGGACTACGTTGATGGCCGTGGTGGCCGAGGCGTACAAGGGCTGCAAAACTGTCGGTCGTGTCGGTTTGGCCCTGTTGCGCAATGATGTCGGTGCCGCTCAGCTGATGGTGTACAAGAACTGGGCGAAGGTGCTCagccggctgctgctgaccatATCGACAGAATCATCTCAGCCACGCTTCGGCGACTGTGTAGTGATAAAGCGGCaaacatatttgcaattcTTTGACGATGAGCACTGCTTCTGGAGACCGCACATTGAACAGGCTAAAGACTACGAGCAGTTTACAGAGGCGCTGACAAAACTGGGCATAAATCAGAATGAACCAGTCCGAGCGAGCAACGATGACAGCGAAAGCAAGTCCACACAATACGGCGACGATATTATCACCTCAGCAccagccccagccccagccACCAAGGCGCTGATAAAAAGTTGCATTGCTGTGTCTGCCATTATTGATGTGGACATTGTGCCGGAGACGCATCGGCGAGTTCGTCTCCTCAAGCATGGCAGCGATAAGCCGCTAGGCCTCTACATACGCGATGGCACCTCGCTGGCAAGACACTAG
- Protein Sequence
- MAVVAEAYKGCKTVGRVGLALLRNDVGAPQLMVYKNGAKVLSRLLLTISTESSQPRFGDCVVIKRQTYLQFFDDEHCFWRPHIEQAKDDEQFPEALTKLGINQNEPVRASNDDSESKSTQYGDDIITSAPAPAPATKALIKSCIAFASLIEQLHKLAIIQFIKQSARQRSVAHQQRWQLWACTENGTPATARHCPAQRRSERPQSEQKLQQLSVVNWTTLMAVVAEAYKGCKTVGRVGLALLRNDVGAAQLMVYKNWAKVLSRLLLTISTESSQPRFGDCVVIKRQTYLQFFDDEHCFWRPHIEQAKDYEQFTEALTKLGINQNEPVRASNDDSESKSTQYGDDIITSAPAPAPATKALIKSCIAVSAIIDVDIVPETHRRVRLLKHGSDKPLGLYIRDGTSLARH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -