Basic Information

Gene Symbol
osa
Assembly
GCA_035042125.1
Location
JAWNLV010000002.1:4371330-4391868[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.7 1.6e+04 -3.6 0.1 16 46 770 803 765 804 0.79
2 2 1e-25 1.6e-22 79.6 0.0 3 89 1016 1099 1014 1099 0.94

Sequence Information

Coding Sequence
atgaatgaaaaaataaaatcgccCTCGgctggtggtgttggtggtgctgctaATTCGgccgcagcagttgcagccagcgctgctgctggtggtggtggcgccACACCGCCCACATCGGGTCCGCCCACGCCCAACAACGGCAACGATCCCAacatacaacagcaacaacagcagcagcaacaacaacaaggtgGCCCCTTGCCACATCCTTATGGCGGGCCACCAGTACCAGGAGCACCAAATGATCCAGCCGCCGCAGCCATGTCCCACTATCATCATctacatcaacagcagcatccacaAGGTCCGCCGATGCCGCCACACATGCAGCATCATGGTgggccaccgccgccgccgccacagggaccactgccgctgccgccagAGCATGTAGCCGGCGTCAAGGATGAATATGGATCCTCGGGACATTTGCCCCCACCACAGCCGCATGCACATCCCGCCTATGCGCGCTATCACTCCGCCGATCCAAATATGGATCCCTATCGCTATCAGCCACCGCCTGGCGGCAAACCGccgcaccagcaacaacaacagccacaaggTGGTGCACCGGGTGGCTCACCAAATCGACCGCctccacagcaacagcagcaacggtaTATACCAGGACAGCCGCCTCAAGGGCCAACGCCCACATTGAATTCTCTGCTGCAATCCTCAAATCCGCCGCCTCTGCCGCAACATCGCTACGCAAACAACTACGACTCGCAGCAGCAGGCGGccaatgcagctgcagcagcggcagcagccgcccagcaacaacaacagcagcaacaacatcaacaaaatgcacaacagcagcagcaaccggtCGGCCCACCAGGTGGACCACCGATTCCCGGCCATggaccaccgccgccgccgccacaaCATCAGCCATACGGTGCGCAACAGGGCGGCTGGGCACCACCACCAAGACCCTACAGTCCACAGCTGGGCTCCACGTATAGGACACCTCCACCGTCAAATACATCCAGAGGTCAATCACCATATCCGCCAGCTCACAGTCAAAACTCAGGTTCCTATCCAAGTTcgccccaacaacaacaacaacagcagcaggcccaacaacaacagcaggcggGACAACAGCCCGGTGGAGTTGGCGCACCCGGAGCGCCGGCGCCACCACCCGGCCCctcacagcaacagcagcagcagcaaaacacacCGCCCACTTCTCAATATTCGCCGTACCCGCAAAGATACCCAACACCACCTGGTCTACCGGCGTCCGGACCCAATCATCGAACTGCCTACACAACGCACCAgTATACCGAACCAAATCGACCGTGGCCGGGCGGCTCATCGCCAAGTCCTGGTCCCGGCCATCCATTGCCGCCTGCCTCACCGCATCATGCACCGCTACAGCAACCGCCAACGCCGCATGCCGCTGGTGGTGGTCCGCCACCCAGCAGCAGTCCGGGTCATGCACCGAGTCCATCGCCGCAGCCCTCGCAGGCATCACCATCGCCGCATCAGGAGCTGATTGGACAGAATAGCAACGATAGTTCAAGTGGCGGAGCACACAGTGGCATGGGGTCTGGTCCGCCAGGCACGCCAAATCCACAGCAAGTGATGAGGCCCACACCTTCGCCGACTGGCTCCTCGGGCTCCAGATCAATGTCTCCTGCAGTGGCACAAAATCATCCAATCTCGCGACCGGCGAGTAATCAGTCAAGTAGTGGCGGCCCaatgcagcagccaacagTGGTTGGTGGTCCGCCACCGATGCCACCACACGGTCTACCAGGTGGGCCACCATCTCAGCAACaatctcagcagcagcaacaggcgtCAAATTCAGCATCGTCGGCGAGTAATTCGCCGCAGCAGACGCCCCCCCCAGCACCGCCGCCAAATcaaaatgttaacaatatGGCAACGCCACCACCGCCCCCACAGGGGGCAACAGGTGGCTATCCCATGCCGCAGCATATGCATGCCGGCTACAAAATGGGTATGCCTGGTCAAAATCCCGGCGCACAAGGATATCCACCACAGCAATATCCGCAAgGCAACTATCCGCCACGCCCTCAGTATCCGTCGGGTGCGTATGGAACGgggccaccaccgccgcctgGCAGTCAACCGGCTGGCGGTGCTAACAGCATGCCATCCGGCGCACAGGCAGGCTACCCGCGATCCATGCCCAATCACAGCGGTGGCAGTCCACATCCGCAGTATCCGCCATATCAGTGGGTGCCGCCATCTCCACAACAATCGGTGCCCGGTGGCGGGGCCGCGGGACAAATCGGACCAGCGATGGGCAACCATGTGCAGGGCAAGGGTACACCACCACCGGTGGGGCCACCGCCACCACAAGGCAGTGGTTCGCCACGCCCACTCAACTATCTGAAACAGCATTTACAACACAAAGGTGGATACGGCGTCAGTCCAGCTGGTGGTCCACAGTCCCAGGGCTATGGCAATGGGCCAACTGGCATGCACCCCTCAATGCCAATGGGTCCGCCCCATCATATGGGTCCGCCGCAGAGTATGGGGCCGCCGACAAGCACACCGCCACAGTCAATGCTGGGTGTTCCGCCTGGCAGTGATAGCGGCACGGAGCATATATCCCAGGACAATGGCATCAGTTCGTCGGGCTCGTCGCCAGCGACGGGCATGCATGCGGTAACTGCTGTGGTAACAACTGGACCGGATGGCACCCCAATGGATGATGTTAGTCAACAGAGCACGCTCTCAAATGCATCGGCTGCATCGGGCGAAGATCCACAATGTACTACACCAAAGTCGCGCAAACTTGATCCGTATAGCCAAAGCCATTTAGCGCCACCGAGCACTTCGCCACATCCAGTTGTAATGCATGGAGGCGGCGGTGGTCCAACTGGCGAGGATTACGAAATGAATTCTCCCCCAAACTGGCCACGCCCAGCTGCAAGTtcgcagGTGTTCAACAGTCATGTTCCTGTTCAACAAGAACCATTTCGTAGCACGATTACGACCACTAAGAAATCCGATTCGCTGTGCAAACTGTACGAGATGGATGACAATCCGGATAGGCGTGGCTGGTTGGACAAGTTGCGCGCTTTTATGGAGGAGCGTCGGACACCGATTACCGCGTGTCCGACCATCTCAAAACAGCCACTCGATTTATATaggttatatatttatgtaaaagaACGTGGCGGATTCGTCGAGGTGACCAAGAGCAAGACCTGGAAGGATATTGCCGGTCTGCTGGGGATCGGCGCAAGCAGCAGCGCTGCGTACACTTTACGCAAACACTACACCAAGAATCTGTTGGCATTCGAGTGCCACTTTGATCGGGGCGACATCGATCCCTTGCCCATCATTCAGCAGGTGGAGGCGGGCAGCAAGAAAAAGACAACGAAGGCAGCCTCGGTGCCATCACCTGGATCATCGAACTCGCAGGATTCTTTTCCAGCGCCACCGGGTGGCGGTGCACCAAACACAAATATCGATGGCTATACGGGTTATACGGGCGCTGGTGCATATCCACCAACGGCTGGTCCACAGCCAGATTATGCTGCAGCGGGCCAAATGCCAAGGCCCCCATCGCAAAACAATCCGCAGGCACCACATCCAGGCACACAAAATCAAgccgctggcgctgctgctgttgttgccggtGATAACATAAATGTGAGCAATCCCTTTGAAGATCCAATTGCTGGCGGTGTAGccgctggtggtggtggtgttgctgctgttgcaaatgctgctgctgctgctgccgcggCGGCTGCAACTGGAGTTGGTGGTGCTGCGTCGTCACACGGTGCTCCACCACCGCCCCCACATTCACCGCACACAAACGCGCCACAAACGGCCAATCAACACCACCAACAAGTCGGCATTCCAACGCAATTGCCATCGCCGTCACAGCAACCACCGGCGCCaccaccacagcagcaacatggtCCGCCATCGTCGCAGCATGCGCGCCCACCACCAACTGGAGTACCTTATCCACCAGGTAGCTCTGGGTATCCAACGCCTGTGTCTAGAACGCCAGgCTCACCTTATCCAACACAACCCGGTGCTTATGGCCAATACGGTTCTGGCGATCAGTATAATGCCGCTGGTCCGCCCGGCCAGCCATTCGGACCAAATCAGGGGCAATATCCGCCGCAGAATCGCAATATGTACCCTCCCTATGGGCCCGAAGGGGAAGCTCCTCCCGCTGGTGCTAATCAGTATGGCCCGTATGGAAATCGACCCTATAGTCAAGCACCGCCCGGTGGGCCACAGCCACCAGCACAAGCCGTTGCGGGCGTTCCACCATCTAGTGGAGCGCCAGTCGCACCACCAAATAGTGGTTATGTACCAACCACTCCCAACCAGCAGGATTACTACAGGCCGCCAGATCAAAGTCCGCAGCCGCGTCGACATCCTGACTTTATAAAAGATCCACAGTCCTATGCAGGATATGCTGCACGGCCTCAAATTTATGGTGGTTGGCAAGGCGGCAACCAGCAGTATCGTCCTCAATATCCCACTGCATCAGCGCCACAATCGTGGGGCAATGGACCGCCACGAGGAGCTGCACCACCTGGGGGACCGCATGGTCCGCAcggacagcagcagcctgGTGTGGCACAGTGGGAACAGCATCGTTATCCACCACAACagccgccaccaccgccgcagcaacaacagccgcccTACCAGCAGGCTGGGCAGCCGCCTGGACAGcctccacagcagcagcagcagcaacagcagcagcaacagcagcaacaacagcagcagcagcaacaacagcagcagcaacagcagccggcaCCACCTCAATGGGCGCAAATCAATGCTGTTCAAGGGCCTCCACCAGGAGCGAATCTACCGCAACCGGGCGCATCACTGCGTCCGCCAATGGGCGGCActccacaacagcagcagcagcaacaacaacagcgcatGCCCAGCGGAGTGCCTGTGATgccgccacagcagcagcccgGTGTTCCGCCGGGTGCAGTGCCGCAAGTGCCACATGGAGTTGTACCGCCACCGGGTATGCCGCCCGTTGCCGGTGGCATGGTGAAGCCACCATATGCGATGCCACCACCATCGCAGGCGAGCGTCGCCTCACCCGGTGTGGTAGGCCCAATGGGTGTGGGCAATCCTCCCGGCGCCATGATACCGCAAAAGCAACCGCCTATCGTTGGACAGCCGCAGAGTATGCTGCAGCaggcgcaacagcagccgccacATCAACCGCCACACCAGCAGCTGGTTCCCAATCAGCAGCAGGTTCCACACCAGCAGCTGCCCCCAAATCAGCAGCCGAACTATGCGCCGGTGCAAGTGCCGCCCGGTGCTGCAGGTGCTCAACTGGTGAAGAAGGAGCTGATCTTTCCGCACGACAGTGTGGAGTCGACAACGCCGATGCTCTATCGACGCAAGCGCCTGACCAAAGTCGATGTCTGCCCCGTGGATCCGTGGCGAATATTTATGGCGATGCGTTCGGGTCTGCTGACGGAGTGCACCTGGGCGTTGGATGTGCTGAATGTGCTGCTGTTTGACGACACCACCGTGCAGTTCTTTGGCATATCGAATTTGCCGGGTCTGCTAACGCTACTGCTGGAGCACTTTCAGAAGAATCTCGCCGAAATGTTCGACGAGAGATGCGAGGATGCAACAAACAATGACGAAGCGGCCAATAACAATGATGACGATGCGGACAGCGGCACCGTCATGTCCCTGCAGATGGATGACAAACTGCATCatcgacagcaacagcagcagcagcgacagacgacgacgacgcgcTGTGTGCGGAGCATCTGCAGCTACAATCGGAAGCGACACTATGAGAACATGGATGTGAAGCAACAGCGGGAGGATTCCGATGATGCGGACGAGGGCATTGATCTGGGGCAGGTGCGCGTTCAGCCAAATCCTGAGGAGCGTTCGCTTTTGCTGTCTTTCACGCCCAATTATACGCTGGTCACGCGGAAAGGTGTCCCGGTGCGCATCCAGACTGCCGATCACGACATCTTTGTGGATGAACGCCAGAAGGCATGGGATATCGATACGAATAAATTGTACGAACAACTGGAACCGGTGGGCAGCAATGCCTGGACATATGGCTTTACGGAACCGGATCCACTTGACGGGATCATCGATGTTTTTAAATCAGAGATTGTTAACATTCCATTTGCGCGATACGtgcgctcctcctcctcgtactcctcatcctcctcctaCTCCAAACACAAGGGCGGCAAACCCGAAGTCACACAGAaaaccaccaccaacaacaatagcagccaCCTGCGGACAGACGATATATCGACGGTTCTGCTCAAGCATGAGGAcaccacaagcagcagcaccgaGGACAGCAGCCTACTCCAGCAGACGTACAACAAGAAACGACGACTCGTCAGCAGCAGTGGTGGAGGTGCTTGTGGTGGCGACACCAAGAAATCCAAACTGGCCGACGATGAATTCGCCCAGCCCACGGTGGAGGTGAGAAAGGAGGCGGCCGATGGTGATAATCTGAACGTGGACAGTGATTGTCGTGCCATTGACATGGAAATTGAAtcgccacaacagcagcagcggctcaCAAACGGTGTCGCCTCGCAGCAGAAGGGATTCGATCCAAAGTCAACGGTACGCGATGTGGCGCAAGTGTTGCAACGTCGTCGCGACTCCAGCTACGAGGATGAGTGTTATACGCGCGATGAGGCCTCACTGTATCTGGTGAACGATAGCCAGGACTCGTTGGCCCGACGCTGTATCGCACTCTCGAATATCTTTCGCAATCTGACCTTTGTGCCCGGCAACGAAACTGTGCTGGCGAAATCGACCAGATTTCTGGCGGTACTCGGACGCTTGCTGCTCCTCAATCACGATCATTTGCGGCGCACGCCCAAGACGCGCAACTATGACCGGGAGGAGGACACAGACTTCACCGACTCGTGCAGCTCGCTTCAGGGCGAGCGTGAATGGTGGTGGGAATACTTGATAACCATACGCGAGAATATGCTGGTGGCTATGGCGAATATCGCTGGACACTTGGAGCTGTCACGCTACGATGAATTGATTGCCCGTCCGCTCATCGATGGCCTGCTCCACTGGGCGGTCTGTCCCAGTGCACACGGCCAGGATCCGTTTCCGTCGTGCGGTCCCCATTCGGCGCTATCGCCTCAACGGCTCGCCCTCGAGGCGCTGTGCAAGCTGTGCGTGACCGATGCGAATGTGGATTTGGTGATAGCGACGCCACCGTTCTCGCGACTGGAGAAACTGTGCGCGGTGCTCACGCGTCACTTGTGCCGCAATGAGGATCAGGTGTTGCGTGAGTTTTCCGTCAATTTGCTGCACTATCTGGCAGCGGCAGACAGTGCAATGGCCCGAACGGTGGCCCTTCAATCGCCGTGCATATCGTATCTGGTCGCATTCATTGAGCAGGCGGAGCAAACGGCGCTGGGCGTAGCAAATCAGCATGGCATCAATTATCTGCGCGAGAATCCTGACTCGATGGGCACGAGCCTGGATATGTTGAGACGAGCAGCCGGCACTTTGCTACATCTGGCCAAGCATCCCGATAATCGTTCGCTGTTCATGCAACAGGAGCAGCGTCTGCTTGGCCTCGTCATGTCGCACATTCTGGACCAGCAGGTGGCATTGATTATCTCGCGGGTGCTCTATCAAGTGTCTCGTGGCACTGGGCCAATGCATTCAGTCGAATACAgattgctgcagcagcgacaacagcaacagcagcaacaaaaacacctgcagcaacaacaacagcagcagcaacaacagcagcagcagcaacaacaacagcggccgAGTTCGGtgccgacaacaacagcaacagctgagaAGCAGCAAAGTGCGTCGACAAAAACTGAACCCGAACAATCATTGTCATTGGATGTAAAAGCTTGCAATGctaatgcaactgcaacagctgctgccacaaacacaacagcaacagctgcagcagtaacaacaaatgCTGTTATTAACGAtgacagcagcaatagcagtcAACAATTGCAGCCGGCTGCCACATTCAACGATgtgagcaacagcagcacgaacagcagcagttgtggcACAGTCAGCAGCAATcagacaaacagcagcagcctggGAAGCAGCAGTCAGACGACAACGCTTAATAATTTGATTACGCCGagcgaacagcagcagcaagtggtTAAAATTTCAACTGCTTCCCCCTCGTCAGCGACGTCGTCTTCCCCATTGACAGCGAACGCGCTGAACAACATaaatgcatcagcagcagccacatcgaattcaacacaacaacaatcaacagcacaacagcaacaacaatcatcggcggcggcggcagtggCACAACAAACGGCTGCACCACCgccaacaaatgcaaatacaaccGCCGCCGTTGCGTAG
Protein Sequence
MNEKIKSPSAGGVGGAANSAAAVAASAAAGGGGATPPTSGPPTPNNGNDPNIQQQQQQQQQQQGGPLPHPYGGPPVPGAPNDPAAAAMSHYHHLHQQQHPQGPPMPPHMQHHGGPPPPPPQGPLPLPPEHVAGVKDEYGSSGHLPPPQPHAHPAYARYHSADPNMDPYRYQPPPGGKPPHQQQQQPQGGAPGGSPNRPPPQQQQQRYIPGQPPQGPTPTLNSLLQSSNPPPLPQHRYANNYDSQQQAANAAAAAAAAAQQQQQQQQHQQNAQQQQQPVGPPGGPPIPGHGPPPPPPQHQPYGAQQGGWAPPPRPYSPQLGSTYRTPPPSNTSRGQSPYPPAHSQNSGSYPSSPQQQQQQQQAQQQQQAGQQPGGVGAPGAPAPPPGPSQQQQQQQNTPPTSQYSPYPQRYPTPPGLPASGPNHRTAYTTHQYTEPNRPWPGGSSPSPGPGHPLPPASPHHAPLQQPPTPHAAGGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPTVVGGPPPMPPHGLPGGPPSQQQSQQQQQASNSASSASNSPQQTPPPAPPPNQNVNNMATPPPPPQGATGGYPMPQHMHAGYKMGMPGQNPGAQGYPPQQYPQGNYPPRPQYPSGAYGTGPPPPPGSQPAGGANSMPSGAQAGYPRSMPNHSGGSPHPQYPPYQWVPPSPQQSVPGGGAAGQIGPAMGNHVQGKGTPPPVGPPPPQGSGSPRPLNYLKQHLQHKGGYGVSPAGGPQSQGYGNGPTGMHPSMPMGPPHHMGPPQSMGPPTSTPPQSMLGVPPGSDSGTEHISQDNGISSSGSSPATGMHAVTAVVTTGPDGTPMDDVSQQSTLSNASAASGEDPQCTTPKSRKLDPYSQSHLAPPSTSPHPVVMHGGGGGPTGEDYEMNSPPNWPRPAASSQVFNSHVPVQQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPPGGGAPNTNIDGYTGYTGAGAYPPTAGPQPDYAAAGQMPRPPSQNNPQAPHPGTQNQAAGAAAVVAGDNINVSNPFEDPIAGGVAAGGGGVAAVANAAAAAAAAAATGVGGAASSHGAPPPPPHSPHTNAPQTANQHHQQVGIPTQLPSPSQQPPAPPPQQQHGPPSSQHARPPPTGVPYPPGSSGYPTPVSRTPGSPYPTQPGAYGQYGSGDQYNAAGPPGQPFGPNQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGNRPYSQAPPGGPQPPAQAVAGVPPSSGAPVAPPNSGYVPTTPNQQDYYRPPDQSPQPRRHPDFIKDPQSYAGYAARPQIYGGWQGGNQQYRPQYPTASAPQSWGNGPPRGAAPPGGPHGPHGQQQPGVAQWEQHRYPPQQPPPPPQQQQPPYQQAGQPPGQPPQQQQQQQQQQQQQQQQQQQQQQQQQQPAPPQWAQINAVQGPPPGANLPQPGASLRPPMGGTPQQQQQQQQQRMPSGVPVMPPQQQPGVPPGAVPQVPHGVVPPPGMPPVAGGMVKPPYAMPPPSQASVASPGVVGPMGVGNPPGAMIPQKQPPIVGQPQSMLQQAQQQPPHQPPHQQLVPNQQQVPHQQLPPNQQPNYAPVQVPPGAAGAQLVKKELIFPHDSVESTTPMLYRRKRLTKVDVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDTTVQFFGISNLPGLLTLLLEHFQKNLAEMFDERCEDATNNDEAANNNDDDADSGTVMSLQMDDKLHHRQQQQQQRQTTTTRCVRSICSYNRKRHYENMDVKQQREDSDDADEGIDLGQVRVQPNPEERSLLLSFTPNYTLVTRKGVPVRIQTADHDIFVDERQKAWDIDTNKLYEQLEPVGSNAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYVRSSSSYSSSSSYSKHKGGKPEVTQKTTTNNNSSHLRTDDISTVLLKHEDTTSSSTEDSSLLQQTYNKKRRLVSSSGGGACGGDTKKSKLADDEFAQPTVEVRKEAADGDNLNVDSDCRAIDMEIESPQQQQRLTNGVASQQKGFDPKSTVRDVAQVLQRRRDSSYEDECYTRDEASLYLVNDSQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHDHLRRTPKTRNYDREEDTDFTDSCSSLQGEREWWWEYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPHSALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGTGPMHSVEYRLLQQRQQQQQQQKHLQQQQQQQQQQQQQQQQQRPSSVPTTTATAEKQQSASTKTEPEQSLSLDVKACNANATATAAATNTTATAAAVTTNAVINDDSSNSSQQLQPAATFNDVSNSSTNSSSCGTVSSNQTNSSSLGSSSQTTTLNNLITPSEQQQQVVKISTASPSSATSSSPLTANALNNINASAAATSNSTQQQSTAQQQQQSSAAAAVAQQTAAPPPTNANTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00500087;
90% Identity
iTF_00516775;
80% Identity
-