Basic Information

Gene Symbol
Arid2
Assembly
GCA_018903485.1
Location
JAEIGF010000297.1:3716181-3722273[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.7e-25 1.3e-21 76.6 0.0 2 89 95 181 94 181 0.93
2 2 2.3 5.2e+03 -2.3 0.0 26 68 1384 1428 1372 1442 0.71

Sequence Information

Coding Sequence
ATGACGTCCATTGATAATGTACGTGTGCTGCTGCAGTCTCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTTTTGGCACGCCGGAAAAATCAACAACTGGGGTCAGTGTTGGTGGCAAGCAGCTCAGGGCGCCGGAGGAATTCTGGCGTGATCTGCACCAGTTTCACGAGCGGCGCGGCACTCCGCTGACGCAGGCCGCCAAGATAAGTGGTCAGCATGTAGACTTATACCGACTGTACCAGGAGGTCACGGAGCGCGGTGGCTTCAACAAAGTGAACATGCGCGATGAGTGGGACGAGGTGTACAGCGCGCTGGACACGCTGCGGGATCGTTGCGTTAATGGCACCGCTGGCATTAAGCATATATATCGTCGCTATTTGGACAAATACGAGCGCCTGAACTTCTTAGGTGAGGATCCCGACAAGCTGGAGGCCTTGGAGGCGGTCATCGAGTGTGCTGATTTGGGCGCCAGCGCCAGTCGTGCACGCTCACGTGCCTTGGGCGGTGGCGGCGTCGGGGGTGTAGGTGGCAGCCTAACTGGCGGCGGCTGGGGCAGCATTTTTGGCATGCCGCACTCCACGCTGACGGCCGTGCCCATGGCGTATAACCAGCGCCAGCATATGGTGAATGCGGATCGACGACGTCAGTATAAAATGTCCACACAGTTGCACAAGCACAGCAGTTATGAGAAGCTGCTGTTGTCGCTTATCTCACCGCTGCCCAACGAGCAGGACTTTGCCATCAATGTGTGCACTCTGATGGCCAATGAGCAGCGTCCAACACTGCAGCTAAACGAGTGCCCCAAGCTGTTGGATGTGCTGCTGGCGCATTTGGGCGTCTATGCGGATTACAGCATGCGGCAGCTGTTCCAGCATGGCCACAACAATGCCGGCATGCAGGTGCGACGTCACTCAAAACTTAATTTCTGGCGGGATTTGCTCTACGATAAGCCACAAATTCTGGACCTCTACACGGACGAACAAGCCTGGCTGGACAATGGACTGATCAACAAGGAGAGCGACGCGTGCAATGATTATCTGTTTCAATCGGATGAGCTCGATTTCGAGCTAGACTTCTTAAATTTACGTCGCAGTCATGGCACGGATGAGCGCATTGGCCAGCGAGTACTGCAAATTGTGCAGCTATTGCGCAGCTTGAGTTTTCATCAGGATAACGTTCCGCTGCTCGCCTCGAATCGTACGCTCTGGCGGTATCTGGTCATGGGTGCCAATGTTCGTTGGAGCAACATCCACATTCAGGCACTGGAAACGGCTGGCAATCTGGCGCAGCAATTTGATCTGTTGGATCCCGCCACGGACGAGCTATCTCGCAATCTGCTGGCCACGCTGTGCGAGGGCGTCGAATCGAATGATCGCGCTGTCATCATCAGCTGCCTAGAGATACTCTACAAACTGTGCGGACGCGAGGGCAATGCCCAGCACATTAATCGTTGTCTTGGCTTGGATTTCTATCAGCGTGTGATGCTGTTGCTCTCGCTGACCGATGTGATGCTTTTGATCTTCACGCTGGAGGCGATCTATGCGTTGAGCTCCTTGGGCGCGCGTCCCTGCTCGATGTTGATGCAGGTGCGCGGTCTGCTGGATCAGCTGGTGGCTTTGCTAACCGTCGAGGCGCAATCATATGGCGCGGCTGGCTGCATATTGATGCGCGTCGTGGAGGTGGTGCCGGGCAATATGTTGTCCACACTGGCACAGACCATACCGGGCACTCAAATGACACAACTGATGACGGTCAAGCAGCCGCAGCAGCCAGCGCCGATTGCTGCACTGCCGCCGCCAGCGCCAACACAGGTCCAAGTGTTACCACCTCAACCAGAGACCGTTTCGGTGCCTGTGCCTGCGTCTGCTCCCACGACTACGCCTGCACCCGCCGCTGTGGCCCTGCCTGTGCCTAGTTTGCCGCAGGTGCAGCTGCCTATGCCCAGTTTGCCGCAGGTGCAGCTTCCGCCACCGCCAACCCAACAAGTATCGATGCCTGCTCCAGCAGCAGGCACAGTTGTGCTGCCTGGAACACTGCCCGCAGCGCCCTCTGCGCCGCAAAGCTTTACCCATGATGATGAGACCTATGCGCTGGCCTGGCTGGGTGCCACCTACGAGCGCGCCGGCAATGGTCATGAGTATCGCGTAGAGCAACAGGAGCTGTACACAATTTACCTATCGCACTGCCAGAAGGCGGGCAAACTTTCGGTGGTCAATCGGCTGCAATTTCCACGTCTCGTGCGGCTCATATTCAATGCGAGCGTGGGTCCAGCCATTGTGCGCCAGATGGACGGCACCGATCTGCCCGGCACGCACTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCATCTGATGAAGCTACAGGTACACAAACGCCCAGCTCCTCGCTGATTAAGAGCCTGCTGGCCAATAAAGTTAACGAGCGGCAGCTGAAACAAAAGGCCCAGGCCCAACCGCCTGCGCTGGTGGCCACCACATCCTCTGCCACGGGCTCCCCGGCCAGCCAACCCATTAAGGTGACATCCACGGCAATTAGCGCCTTTGTCAACAATCCGCTGATGCAGCATACGCCCGTTAAGGTGGGTCAAACCACCATAAAGCCTCTGCATCCGCAGCTGGCGCTGGAGAAGAAGCCAATGACGGACTCAGCGCCACCGCCGCTCGCACCATTGAGCGGCTCCAATGTGCTTACGAAGGATGCGCAAGGACGCACCGTAATTATACAATCCAAACGCAAGCTGACCATCGATGATGAGCAAAACAAGCGACTGGCATTGGATAGCAGCAGCAACACGCCCGCTGGCAAGGATGAGCCGCAGCGTGCGGTGCCCGCCGCCTTGGGTGCTGGTCAAATGTCACCCTCGCTGCTCTCGCAACTCAATCAGATACCCGCCACCATTAAACTGCATCAGCCGCAGCCGTCTCAATCTCCGCAGCTGCATCGTGGCGGCATTGTGGGCACCAAGACAGCGCCCATACCACAGCTGCAGCAGCATCAGTCCATTATACAGCAGCATATCATCTCCGGGCCGGCGGCAGCGGCAGAGAAGCGGCAGCTGCTCCTGGGCGGCCTCAAGGAGACAACGCTCATCACACAAACGCCTGCCACGGCTGCCCCACTGCAGCAGAGTCAACTCAACTCGCAGACAATCATTACCACACAGCCGCCGGCAGCTACCACAGCGGTTGTTGGCGCTGCACTGCAGCAGCAACAGCAGCACATACGCAGCGTGCTTGAGCAACAGCAGCAGCATCATCCATCCATAATACAGCAGAAGATAACTATGCCCACAGTGCTAACGGAGACGGTCAAAGCTAAAGCAGCGCCAGCAGCACCAAACATTGCCAAGAAGCCGATGGCGCCGCCAACGCCGTCGATGCCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCGCTGTGCCCGTGGATGTCAATTGGCTGTTCATTTGCGATTGGCGCAATTGTCCGCGTCGTAAATTCAAATCGCTCAACGAGCTGCAGCATCATGTCTGCAATGTGCATTGTCCGGATCATTTAGATTCCGGCGCTGAGATCTATTGCCAGTGGGGCAGCGGCCCCAGCTTGTGTGACAACATAGCCCGTAAGCGCTACTCACTGATGACACATCTGGTGGATCGTCATTTGGCGCTGGATGATCTGCGTGCGAGCGTGCAGCGTCGCCTTGCCACGGGCATACACAATGTGGCGCCCACCCAGCCAACGGTCACTATTGTGCGCAATGTGGGCAATGCCAGCAATGCGTCAGCATCAACAGCGACAACGACAGCTGCTGCTACGCTAGCAACAACGGCCACGGCTGTGGGCACCTCGGCGCTGCAGGCAATTAAACGACATTCGGCCGACTTTCTCAACTCCAAGGAGCTGTTGGATGAGAACGAGGGCCCAGTCACAAAGAGCATACGCCTCACGGCGGCGCTTATATTGCGCAATCTGGTCAATTACACATCGACGGCCAAGCGCAGCCTCAAGCGGTATGAGCCGCATCTGGCCAATGTGGCATTTAGCAATGTGGAGGCCAGTGGCGTCCTCTCCCACATACTGCACGAGCTCAGTCAGTAA
Protein Sequence
MTSIDNVRVLLQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFFGTPEKSTTGVSVGGKQLRAPEEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAVIECADLGASASRARSRALGGGGVGGVGGSLTGGGWGSIFGMPHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEQRPTLQLNECPKLLDVLLAHLGVYADYSMRQLFQHGHNNAGMQVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLINKESDACNDYLFQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQDNVPLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFDLLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSSLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNMLSTLAQTIPGTQMTQLMTVKQPQQPAPIAALPPPAPTQVQVLPPQPETVSVPVPASAPTTTPAPAAVALPVPSLPQVQLPMPSLPQVQLPPPPTQQVSMPAPAAGTVVLPGTLPAAPSAPQSFTHDDETYALAWLGATYERAGNGHEYRVEQQELYTIYLSHCQKAGKLSVVNRLQFPRLVRLIFNASVGPAIVRQMDGTDLPGTHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASDEATGTQTPSSSLIKSLLANKVNERQLKQKAQAQPPALVATTSSATGSPASQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLALEKKPMTDSAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDDEQNKRLALDSSSNTPAGKDEPQRAVPAALGAGQMSPSLLSQLNQIPATIKLHQPQPSQSPQLHRGGIVGTKTAPIPQLQQHQSIIQQHIISGPAAAAEKRQLLLGGLKETTLITQTPATAAPLQQSQLNSQTIITTQPPAATTAVVGAALQQQQQHIRSVLEQQQQHHPSIIQQKITMPTVLTETVKAKAAPAAPNIAKKPMAPPTPSMPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDSGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVAPTQPTVTIVRNVGNASNASASTATTTAAATLATTATAVGTSALQAIKRHSADFLNSKELLDENEGPVTKSIRLTAALILRNLVNYTSTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-