Basic Information

Insect: Drosophila littoralis
Gene Symbol: retn
Assembly: GCA_018903485.1
Location: JAEIGF010000124.1:5342750-5359026[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.6e-26 8.1e-23 80.4 0.0 2 89 328 413 327 413 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.6e-26	8.1e-23	80.4	0.0	2	89	328	413	327	413	0.96

Sequence Information

Coding Sequence: ATGGAGCTGCTCACGGAGACGGAGATGAAGACGGAGATGGAGATGGAGATGGAGACGGAGATGGGGACGGAGTTGTCCCACGGCGATCGCACGGATGACGAGATGCGCGACTGCGATTCCGTCGACGGTGAACATCATCAGCTGAGCGCCAAGGCGGCAATTGCCGCACGTCTCAGTCACACAGTCGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCCGAGCAGCAAACAGATCTGCCACTCAGCCATCACCATCAACTGCCGCCGAATCATCCGCTTAACGCGCTGGGCAGCTTCATGGGCATCGGCGGCCTACACAGCATTCCAAATCTCCAGCACAGCGATGTTCTCGAGAAGCTCAAGATGCAAGTGCGTGACATGAAAGTGGGCCTCATGGAACAGGACTATGCAGCAGCGGCGCATGCGGCCGCCTTTGGCGCCAATATGCTGCCCACAACGATCAGCACGGCCTTCCCGCTGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGCGCCAAAGAAGCGCGCCACTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTCTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTATATAATCTGGTGATAGCCCGCGGCGGCCTTGTCGATGTCATCAACAAGAAGCTTTGGCAGGAGATTATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCCGCATTCACGCTGCGCACACAATACATGAAGTATCTGTACCCTTACGAGTGCGAGAAGAAGAACCTGAGCACACCCGCCGAGCTGCAGGCGGCCATTGATGGCAATCGCCGCGAAGGACGCCGTTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCGTTGACGCCTATTTCGCGACCACCGCTGCCGGGTGGCATGCAACAGATGTCACCCTTGGCGCTGGTCACACATGCCGCAGCAGCCAACAATCAGCAGGCGCAGGCAGCGGCAGCCGCCGCAGCAGCGCACCGCCGTCTAATGGGCGGGCCGCCATTTGGCCAGATGCCCAATTTGGTCACACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCTCTGAACCTGTCGGACTCGCCGCCAACTCTCAATCTGAACCACATAAAGCGTGAACGCGAACGCGATCCGACACCTGAGCCGGCGGATCAGGAAGATGCACCGCATCAGCCGCCGCCAGCGAAACGGGTGGGCAGCGGCCTGATGCCGCCCGGCTTCCCGGCGAACTTTTACTTGAATCCACACAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGCCGCGTCCGATGGCGAGCCAGAGGATGACTATGCCAATGCGGAGCACAACACCACCGGCAATTCGTCCTCCTTGCATGACGATAGCGAGCCGCAGCAGCTGAACGGGCACCACCACCACAATCTGCATCACCACCACCAGCACCACCATCATTCGCATCATCAGAACCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCACTTCCACAACAGCATCGGCTTCGGGCGGCGGCCATCGTCACAGCTCGCCGGTGTCTACCAAGAAGAAGAGCAGCGGGAGCAAGGCGCAGTCCAGCTCAAAGGACGGCAGCTGCACAACTGAAGGGGGAGGCGGCGGCGGCAGCGGCAGCAGCAGCGGGGGTATAACTGGAGCCGGCGTTAAGCTGAATCCCCTCGAGACACTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCAAACGGCGAACAGCAGCTGATTGTCAATCTGGAGCTGAATGGCATTAAGTACTCGGGTGTGCTGGTGGCCAATGCAGCCGGGCCCGAGCAGAGCGAACAGCCGGACACAGATGCGGACGCCGAGACGCCCACAGCTGCCGAGGAGCCGGAGCACGAGGAGGCCGCCCACGATGCCAGCCAGGAGTGCAGCCAGAACGAGGCAATCGACGACGACGAGGAGGAGGAGGACGACGAGCAAACACAGCAGCAGCAACAGCAGCAGCACACGGAGGATATTGTGAATGGCAGCAGTGCGGTCGGTGTGGGTGCGGGTGTGGGTGTGAGTGTGGGCGTTGGATTGGGCTCGGTGGGCGTGTCCCTGCTAAAAGATGCGGTGGTCAGCTCGTAA
Protein Sequence: MELLTETEMKTEMEMEMETEMGTELSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSAKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPPFGQMPNLVTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADQEDAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASDGEPEDDYANAEHNTTGNSSSLHDDSEPQQLNGHHHHNLHHHHQHHHHSHHQNHLDKSDDSAIENSPSTSTTASASGGGHRHSSPVSTKKKSSGSKAQSSSKDGSCTTEGGGGGGSGSSSGGITGAGVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAAGPEQSEQPDTDADAETPTAAEEPEHEEAAHDASQECSQNEAIDDDEEEEDDEQTQQQQQQQHTEDIVNGSSAVGVGAGVGVSVGVGLGSVGVSLLKDAVVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00474998;
90% Identity: -
80% Identity: -