Dlim015307.1
Basic Information
- Insect
- Drosophila limbata
- Gene Symbol
- pnr
- Assembly
- GCA_963924055.1
- Location
- OZ001353.1:1754533-1765077[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8 1.8e+04 -3.9 0.7 1 6 233 238 233 239 0.83 2 2 1.4e-16 4.4e-13 49.2 2.5 1 35 741 774 741 775 0.98
Sequence Information
- Coding Sequence
- ATGTATAATGTACCACATAAGTATCGCCAAGTTTGTCGATTGTGCCTCACTTTGGTTAATGAGTGCGATATCGGAGATCTACAAATTTATAATAGTGAGACAAGCGCAAATGAAACAGTTAGCAGCCAACATAAATTATACGCTAATCAGTGCAATATTAATGAGAATGCGTCGAAATGTGTCTGCAGTGCTTTGGACCCAAATACATGTTGCTGCCAATGTGATAACTCGTTATCAACAGTGCAAAGCAATAAAGAAGTGGCCCTATGCAATTCTcaacataaaaacaattacacACCGAGTGTGCCTTCTGCTATTGCCAACCCGCCATGCACAATTGAAAACAATATCTATGCTCGCATGTTTTCCAATAAAGCTCGGCTGCAAGCTCAACCATCAGCATCACAATTACTATTACAATCGCAAAAAGAAGTAATTAAAAGAGAAGCAACAAATCCAATTGGCCATGAGGAGCAACAATTTATACACAAGAAGCAACATGATATTGTTCACGATAATGCAAAATCGTCATCAACATCAACCAAACATGTATTTCATGATATCGGCGAATATACTTCAAGCAACGAAAATTACAATCAAGAGCATAAAGATGATTCATCACCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTACCAAATGATGGATTCCCTACAATTATCTGCCGTGAGTGCCGGACAAAGCTTGAATCCTTTTGGAAGTTTCGCAACATGGCGCTGAATTCACATTTGGCCTTGAGAGAATTTCTAACAATATCGGAGTCGTCAAAGCTTGATTCAAATCATTTGGAAACGAAACTTGATGAAATTTTGAAGTCAACATCCGAGGCAATAGCGGCAAGGGCACTGACTGAACTGAGCAAATCTTCAAAAACCCGATATAGCCAACGGCAACCTAAACTTGATGGTATTTTAAATGCAGCAATGGATCTAGAGCGACATATTGAAAGTAACAAAAGAGATATTCAAACCCCTTTATTGTATTCAAACTTATTTGAAAGTTCATCCGGTTCACAAACGTCAAGTAATGCTATTATTGAAAGAGAGCCGATAATGATTCAAGATAATATATTGACATCGcgaacagctacaacaacaacaacaacaacaactgcggcAGTGGCAGCAGGAAcatcagcagcggcagcaactaCAATAAAAACAgagaaatattttgaattggATAATGGTACGGAGATGAATTCCAAAGATCCAGATGTTGAACAGTATAAAAACTTGCAGCAACAACTAGAGACTGCCGCAGTGCTTATGGATATAAGTAAAAAGATTGTCATTTCACCACCATGCTCGAATCCCCAATCTCCTTGTCTTTCTGCAATTGTAGATACAAGTATTAAAAGTTCTGTGATAAAATCAAAACGTCCATCAATCGATAACGAGATGCAAGATAGTGTTGAAATCGATTTATCCgtgaaaaagaagaaaactgAATATTCCACTGAACGGAATGTagccccaacaacaacaacagcaacatcaacagcaacagcagcaacaacagcacgtAACACATTTGGCCAACCTACAATACTTGACATCCATGCGAATCCCATAAGGATTGGCGATGGCGATCCTAAGAATTATAGTATTACTATCAATGAAGTTGGCTCCTCTAGTTACCAATTGAACACAAAAAAACTGAATACCGAAAGTATTGCTACTTGTCTATCGGACTCTGAGGACAGCTCTGATTCGAATAAACTAGAAATGGATATTTCATCTGCTTTGAATGATAGAAAGACTCCAGAGAGCGTAAATTCTGATCATGCAACAGATGCAGCGACCACACAACTCTGGCAAGCATTGGCACGATCCGCTGcCAAAAATAAAGAGGAGAGTCGAGCATCGCAATTATTGCGAAATATGATGAATCAAACTTTTGTATTTCCTGTGCCGTCGACCATAGCATTAACAAAAGTACCTGAAGAACCCATACCACTATTAAAGGATATGTCTGAATCTCAATCGAGTGTTGTCAAAATATGTAGACGAAAGCAAAGTTTTCCTACAAAAACAGATTGCATCGAGTCTCCAGATATTAAGGTGACCGATACTTTCGTTCGTTCCGAAAGTGTATCAAATACATTGACAGAAGGAATCAAAGACAAAAAGAGTTTAAAATGCAACAGCAGTAGTGCTTTGCCTACATCACAAAAGGATATGTCTTGCTCTAATTGCGGAACTCTAACTACAACAATTTGGAGGCGAAGTGTCCGAGGCGAAATGGTTTGTAACGCTTGCGGATTGTACTTTAAGCTACATGGCGTTAATAGACCTCATTCTATGAGACGCGACACCATTCACACTCGGCGCAGGCGTCCAAAAGAATGCGAGAAATCAAAGAAAcgAAACCGACAGTTACCCTGCAATTCGGCGGTAGATTTTGAAACACACAACATAAGTAGTCCCGTGGATTGCAAAAAGCTGGATTTATCGCTAAATCAGGAAACACTGAGTATTTCAGATCTAGTATTTAACAAATACAAAACGGAGTTATCTGAAACAGGAGGAGCGGCAGCAACACTGAAAGATGTTATTTTAAAACGGAAAAAATCACAATCTTTGCCTGAGTTTAATGATACCTGCGAAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAAcgccaaataa
- Protein Sequence
- MYNVPHKYRQVCRLCLTLVNECDIGDLQIYNSETSANETVSSQHKLYANQCNINENASKCVCSALDPNTCCCQCDNSLSTVQSNKEVALCNSQHKNNYTPSVPSAIANPPCTIENNIYARMFSNKARLQAQPSASQLLLQSQKEVIKREATNPIGHEEQQFIHKKQHDIVHDNAKSSSTSTKHVFHDIGEYTSSNENYNQEHKDDSSPHITIQIFNCLSIKPLPNDGFPTIICRECRTKLESFWKFRNMALNSHLALREFLTISESSKLDSNHLETKLDEILKSTSEAIAARALTELSKSSKTRYSQRQPKLDGILNAAMDLERHIESNKRDIQTPLLYSNLFESSSGSQTSSNAIIEREPIMIQDNILTSRTATTTTTTTTAAVAAGTSAAAATTIKTEKYFELDNGTEMNSKDPDVEQYKNLQQQLETAAVLMDISKKIVISPPCSNPQSPCLSAIVDTSIKSSVIKSKRPSIDNEMQDSVEIDLSVKKKKTEYSTERNVAPTTTTATSTATAATTARNTFGQPTILDIHANPIRIGDGDPKNYSITINEVGSSSYQLNTKKLNTESIATCLSDSEDSSDSNKLEMDISSALNDRKTPESVNSDHATDAATTQLWQALARSAAKNKEESRASQLLRNMMNQTFVFPVPSTIALTKVPEEPIPLLKDMSESQSSVVKICRRKQSFPTKTDCIESPDIKVTDTFVRSESVSNTLTEGIKDKKSLKCNSSSALPTSQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLPCNSAVDFETHNISSPVDCKKLDLSLNQETLSISDLVFNKYKTELSETGGAAATLKDVILKRKKSQSLPEFNDTCEGEELSVPLNLVSSENNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00529226;
- 90% Identity
- iTF_00529226;
- 80% Identity
- -