Dlim017819.1
Basic Information
- Insect
- Drosophila limbata
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963924055.1
- Location
- OZ001353.1:24845926-24848994[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.51 1.4e+04 -3.7 0.1 85 103 53 71 30 100 0.52 2 3 0.42 1.2e+04 -3.4 0.8 85 110 108 130 53 144 0.55 3 3 8.9e-99 2.5e-94 315.9 12.1 2 218 316 524 315 524 0.92
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATAAAGAAGATTTTCACgtacatccagaaaaatgcCAGCAACGGGACAATGTTTGGCAGCACGAATAGCGTAAACACTGAGAATGATGACGTCGCAAGTGGCAGCAATGCCAGCAAGCTGGAGCCgaaggaggaagaggaggagccGGAGCATCAACTGGAAAGAGAGCCGGTCCTGGAACAAGATGATGACGATATTGAGCGTCAAATAAAAACATCAATTATCGATGCCACAAAGGTGGTGCATGTAGCtaaatcaaaaattgtatTGCCACTGGTACTCCAACTGGATGATGAACTAGCGGATTTTGCACACGAACCTGTGACATTAACTGATGAGGATGTGGATGACGATGAGCTGGAGGAACAGTATCTGGAACTGGAAAGTTATCCCAACAATGAGATTATTGTGTTAACTGACAATGAGCTGAACTCATCGCTCGCCTCGGATAATATCTCGGAGGATCCTTTGGCCATTGATGAGTTTACGCAGCCGCTGGCACGCGACGAGGAGGCGGACAATGAGGAGgaggaaattgaaaataatggTGAATTACTCTGGCTAAAGCTGGACACGCCAATGgaggcagtggcagcaacaaccaaCAGTGGAAATGTCGATGACATTGTTGTTACAGCTCCTCCACCAACTGATTCATCAGCCAAGGTGCCCACCAAGACCAAAGAGGAGGAGCTGCTGCGCAGTGATGGTGGCTCCGATTCGGGATTGGGCAcagaaacaacaacaaccatcaCAACGGAACCCGCTCCAAgtgaagcaacaacaacagtgcagaAACCACTGCGTTCCAATTTGAAGCGTCGCCTGGAGGACGATGAACTGTCTCTGGTGCCTGACATGAACAGTAGCATCTCCTCCGCCTCTGCCTCCGTCTCCGGCTGTCTGTCCAGTGCACAGAAACGCTCCAAGCGCTCCATTAACTTTGATAGCGTCAAGGTTTACTACTTTCCCCGCCAGCAGGGATTCAATTGTGTGCCCACTGCCGGCGGTTGCACCCTGGGAATGGCCGCCAGGCACATTGCCTTCAAGACTATGACGCTGGCGGAGCACGCAGCCGAGTTGAGGCGTGCCCATCGCAGCCAGAATCAGAAtcaggagcaacaacaacagttgcgtGTTGGCGGCTCCAGCAGTGATGATAGCGAGGAGTCCGAGGAGGATTACCTAAGCGAAGGCAGCGGCTCCGATGCCGACGATGGCTCCAATGGCTTCCTGCAGCCGGTGACGCCAAAGCAGCGACGTGCGCTCCTCAAAGCCGCCGGCGTGCGAAAGATCGATGCGAGCGAGAAGATCGATTGCCGGGACATTCGCAACTCACGCGAGGTGTGCGGTTGCTCCTGTCGGGAATTCTGCGATCCGGAGACCTGTGCCTGCAGCCAGGCGGGCATCAAGTGTCAAGTGGATCGCGCCATGTTCCCCTGCGGCTGCACACGCGAAGCTTGTGGCAACACCGTCGGACGTGTGGAATTCAATCCTACGCGAGTGCGCACCCATTACATCCATACGGTCATGCGTCTGGACATGGAGCAACGTCAGAGCCAAGGAGCCCCAGTTGCGAGTGTCAACAGTAGTTTGGTGTACTCCAACAGCTCCacgggcagcagcagcgttggCGTCATCTCACccggagctgctgctgccgccgtcGCCGCATCCTCCACCTCGTCGCATTGCTATTTCATGCAGCCGCAGTCCAACTACAGCTCCGGCTATGCCTCGCCAGCTTACACGCCCGAAACGAGTGTCAGCTActatcagcaacaacagacgCCACCGGCGAATGTGTCGCCACTTGCTACTAGCTATCCACAGCTGGATAGCTTGGACTCGGGTCTATTTGCCAGCGGTAGCAATGCCACGCCCTCGTATGGTGAGCTACTCACGCCCACCTATCATCAAACCCTTGGCTATGGCAGCGCCCAGCTCAACTCCTACACTGGTTACCAGCAGACGACATCAACAGCCGGCGGCAGTGCATCTCCTGGAGCGTACAGTTCGTGTGCGGTGCCATCGGTGCCTCCATTCGGCAATGCGACTACCACCGCCTCGAATGCAACTCAGTATCAGCATGCGAATGCATTGGAAACCACCGCCTCCTCGATGAATGTTAacgtcaacagcagcagcaggagcagcagcagcattgccTTAACGGCCAGCAATTGCTCCACGGGATTAGTGCGCCTAACTGGCTCAGTTCCAGCTGACTTCATTAGCCTGAACTCGCCCATTAGCAGTTCGTCTCGTCTCTCGCAGATTAATGATCTGTTGCAGCACAATCGTAATGCCACAAGCGCTTTGGTGGCCGTCTCCGAGGGTTACACCGCTGTgcggagcagcagcagcaatagtAATAGCACCATTGATTCTATTGACACGCCGCCCATTGTGGAGGAGGCGCAACGCAGCAGTTGCATGACCTTCGAGGAGTTGTCACCGCCATTAATCAATCCCACGCCCATTGTGGCCGTCTTGGAGCATAATGAGCGCAAGCTCCAGCTTCAGGTGGTGAATTCAAAACCACAGCCTCGCCAGCCGCTGGATACAAGTGGAAATCTAACTGAATCCTTGACGAGCGACATCTAA
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASNGTMFGSTNSVNTENDDVASGSNASKLEPKEEEEEPEHQLEREPVLEQDDDDIERQIKTSIIDATKVVHVAKSKIVLPLVLQLDDELADFAHEPVTLTDEDVDDDELEEQYLELESYPNNEIIVLTDNELNSSLASDNISEDPLAIDEFTQPLARDEEADNEEEEIENNGELLWLKLDTPMEAVAATTNSGNVDDIVVTAPPPTDSSAKVPTKTKEEELLRSDGGSDSGLGTETTTTITTEPAPSEATTTVQKPLRSNLKRRLEDDELSLVPDMNSSISSASASVSGCLSSAQKRSKRSINFDSVKVYYFPRQQGFNCVPTAGGCTLGMAARHIAFKTMTLAEHAAELRRAHRSQNQNQEQQQQLRVGGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRALLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQSQGAPVASVNSSLVYSNSSTGSSSVGVISPGAAAAAVAASSTSSHCYFMQPQSNYSSGYASPAYTPETSVSYYQQQQTPPANVSPLATSYPQLDSLDSGLFASGSNATPSYGELLTPTYHQTLGYGSAQLNSYTGYQQTTSTAGGSASPGAYSSCAVPSVPPFGNATTTASNATQYQHANALETTASSMNVNVNSSSRSSSSIALTASNCSTGLVRLTGSVPADFISLNSPISSSSRLSQINDLLQHNRNATSALVAVSEGYTAVRSSSSNSNSTIDSIDTPPIVEEAQRSSCMTFEELSPPLINPTPIVAVLEHNERKLQLQVVNSKPQPRQPLDTSGNLTESLTSDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00585186;
- 90% Identity
- iTF_00585186; iTF_00585956; iTF_00601781;
- 80% Identity
- -