Basic Information

Insect: Drosophila limbata
Gene Symbol: Mblk-1
Assembly: GCA_963924055.1
Location: OZ001352.1:27183837-27187819[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.8e-10 4.5e-07 30.1 0.0 2 38 30 67 29 74 0.85

2 2 8e-19 2e-15 56.8 0.0 1 43 519 562 519 564 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.8e-10	4.5e-07	30.1	0.0	2	38	30	67	29	74	0.85
2	2	8e-19	2e-15	56.8	0.0	1	43	519	562	519	564	0.95

Sequence Information

Coding Sequence: ATGTTTTGTCAGCTCCTTTGTGCTGCTTTGAAAGGCCTTTCGGAGTGTGCCACACCTGTGCCGGCGACAGGTCGACGCACCTACAGTCACGAGGATCTGAACAGCGCGCTGCAGGATGTGGTGGCCAACAAGCTGGGCACCCGCAAGGCGTCCAGTCAGTACCACGTGCCGCGCTCCACGTTGCGCAACAAGCTGGGCAAAATGTCGATAGACGCGAAGCGACCGCACGACttgcaacagctgcaacacgaactggagctggaggagcaggagcaggaggatTCGGGCGAGGAAGTCAACGATGCCGATAGCAATGCATCGACGCCAGCGTCGGGATTTCAGGAGTTTGCCCAACGCATTGCGGCCACGGAGCATCTGCGTAAAATGAGCAACATGTCCGAGCACAACGGCAGCGACCTGGGCGATGACCTGGAGCCGGTGATGTCGCTGTCGCCAAAGCTCCAGGCCAGGCCACAAAGTGCCCAAGGCATCCAGGCACCCGCGGGGTTGCCCATTGATGCCAATGTGTTGCTGCACACGCTGGTGCTGGCGGGGGCTATTGGGGTGATGCCCAAGCTGGACGAGACCCAGACGCTGGGGGATCTGGTGAAAACACTGCTGCTGAACAACAGTAGTGGGATTATCAACGAGGGATTGGCCAATGCGGTAGCTGCCGGACACGAGAGCAATGGCAGtctgctgcagcagcaacatcaacaccaccagcaacagcaacagcatcaccagcagcaacagcagcaacagcagcagcaacaacagctggcAGCTGTTGCCGCCTTTCGTCGCCATTTGCCAAAGTCTGAAACGCCGGAGACGAGCTCCTCACTGGATGCCAATGAGATCTGCGATGATCCTATATTGAAGATTCCGTCCTTCAAGGTTAGCGGCGCTGGCAGCATTTCGcccagcagcatcaacaacatcagcgGCCAccacatcagcaacagcaacaacaacaacaacaacaacaactcaattAACAGCAGCAATCGCAACGGGGATCACAGTCCGCACTCTGCCTCACCGATGCTGGCGGCAGCTGTTGCCGCTGCGGCCGCGAACAACAGTTACAgacagagcaacaacagcagcagcagcggcaatctGTTGTCGCCGTCACAAACATCGATACAGAAAAtgatggcaacaacaatacagCGCAAGATCAATGAGCAGACAAGTCAGGACAGTCTGTTGTCGAGTCTGGACAAGCGCAACAATGGCAACACCAGCGGCAGTgagtgcagcagcagcggagGGGGCAATGgcaacgtcagcagcagcagcaactacaagAAGCCGAGCATTTCGGTGGCCAAAATGATTGGCGGCACGGACACCTCACGCTTCGGTGCCTCGCCCAATCTGCTGGcccagcagcatcagcaacatcacCTGCCCGCCCATCATGCCGCCCACTCGCAtcaccaccagcagcaacagcagcagcagcagcagctgagtgCTCAGGACGCTGCCGCCTTGGCAGCGGGCAAGGGAACGCGTCCGAAGCGTGGCAAGTATCGCAACTACGACAGGGACAGTCTCGTGGAGGCGGTGAAGGCGGTGCAGCGGGGCGAGATGTCAGTGCATCGAGCGGGCAGCTATTACGGCGTCCCGCACTCCACACTCGAGTACAAGGTGAAGGAGCGACATTTGATGCGGCCACGAAAACGGGAGCCGAAACCGCAGCCAGATCTCGTGGGATTGACAGGTGCGGCGAATAAGGCATCCAATTTAGTGGGGCTCAATCAGCTGGACAAACTGAAGgccaacagcaaccacaatcccagccacaacaacaacaacagcaacagttccGGCTCCAAGCTGAGCAATGCACTCAAAAACAATAGCCACGcatccgcagcagcagcagcatcagcatcaacggCCAATGGCATGAGCTTGCCCATCTTTGATTCTGGCCCACAACTGTCCTTCCATTCGAACATGTTCTGGCCACCGAATGCCGGCGCCAGTTTTGGCCTGGACTTTAATCGCAATCCGGAATTCCTCAAGGCCCATCTCACGGAGGTGATGCGCAGCAGTCCCTTGGCTGGCGTGAATCCCAATGCCCATCATGGTCGCCACTCGATTGCGCACGAGTACACGGAGAAAATGTACGATGACATCATACGCAAGACTCTCAAGAACGAGGCCGATGTtggcggcaacagcaacagcagcaacaatggcaacggcaCTGTTAACAGCAATGCCAATGCGTTGCTCGACCAGCTGCTGGTGAAGAAGACACCGCTGCCATTTACCAACAATCGCAGCAATGATTACattgctgccgccgccgctgcagccgcagctgctgctgttgctggcagTTCCAGTTCCGAGGGCAATAAGCGAGCTGGCAGCCCCTTGGGCGCCTATGCGGACATTAAGAGGGAGCGTCTCAGTCCGGGGAGTGCTAGCAGCGATGAGGATCATGAGCATGCcaccagcaataacaacaacaacaacaacaacaacaatagtgaCCTGGCgcacaacaagaacaacagcagcaacaatggcaatagcaacagcaatggAAATGGTCGCAGTCGCATGACATCTCGCGATTCGGAAACGGATGTGAGCAGCCTAAAGAGCGAGCAATCGCACAGCTcggcaccaacaacaacaacaacagcagcgggcaacaacaaaatgatgGATCTCAATGGCAGCAACAGTGTCAAATTCGAGCCggaggcaacagcaacaacaacaacaatgcccaTTTCGCCCAGCAGTTCCATATTGCATGAGAAATTGGCACAGATCAAGGCCGAACAGACCGAGGAGCAATTATAG
Protein Sequence: MFCQLLCAALKGLSECATPVPATGRRTYSHEDLNSALQDVVANKLGTRKASSQYHVPRSTLRNKLGKMSIDAKRPHDLQQLQHELELEEQEQEDSGEEVNDADSNASTPASGFQEFAQRIAATEHLRKMSNMSEHNGSDLGDDLEPVMSLSPKLQARPQSAQGIQAPAGLPIDANVLLHTLVLAGAIGVMPKLDETQTLGDLVKTLLLNNSSGIINEGLANAVAAGHESNGSLLQQQHQHHQQQQQHHQQQQQQQQQQQQLAAVAAFRRHLPKSETPETSSSLDANEICDDPILKIPSFKVSGAGSISPSSINNISGHHISNSNNNNNNNNSINSSNRNGDHSPHSASPMLAAAVAAAAANNSYRQSNNSSSSGNLLSPSQTSIQKMMATTIQRKINEQTSQDSLLSSLDKRNNGNTSGSECSSSGGGNGNVSSSSNYKKPSISVAKMIGGTDTSRFGASPNLLAQQHQQHHLPAHHAAHSHHHQQQQQQQQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKASNLVGLNQLDKLKANSNHNPSHNNNNSNSSGSKLSNALKNNSHASAAAAASASTANGMSLPIFDSGPQLSFHSNMFWPPNAGASFGLDFNRNPEFLKAHLTEVMRSSPLAGVNPNAHHGRHSIAHEYTEKMYDDIIRKTLKNEADVGGNSNSSNNGNGTVNSNANALLDQLLVKKTPLPFTNNRSNDYIAAAAAAAAAAAVAGSSSSEGNKRAGSPLGAYADIKRERLSPGSASSDEDHEHATSNNNNNNNNNNSDLAHNKNNSSNNGNSNSNGNGRSRMTSRDSETDVSSLKSEQSHSSAPTTTTTAAGNNKMMDLNGSNSVKFEPEATATTTTMPISPSSSILHEKLAQIKAEQTEEQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00585109;
90% Identity: iTF_00585109;
80% Identity: -