Dlim009302.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila limbata
Gene Symbol
ct
Assembly
GCA_963924055.1
Location
OZ001351.1:19358204-19382734[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.9 2.7e+04 -4.1 0.0 5 22 629 646 626 658 0.73
2 4 5.8e-27 8e-23 80.9 0.0 3 72 769 839 767 844 0.95
3 4 5.7e-32 7.9e-28 96.9 0.0 3 77 1250 1325 1248 1327 0.96
4 4 3.5e-31 4.9e-27 94.4 0.0 3 76 1517 1591 1515 1594 0.96

Sequence Information

Coding Sequence
ATGTGGCATGGGGCACGAGCTCCGAGTCGACCCGGCTCGCATCCTGGCCAACAACAGTCGTCACGCCCGCCTAGTACTGGCCAAGTCCTTGACGTTAAGATTAAAGCACTTTTGGATGAGCTGCAACGCCTACGCGCTCTGGAACAAACTCACCTGGTACAAATCCAAAGACTCGAGGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGATTAGAGGCGCGCTTGGATAAGCAACAGATCAATGAGGCGTTGGCCGAGGCAACTGCATTGGCGGCCGCTGTTAATGCGGCAgccacaaataataataacaataataacaacaatagcaatagcaataTCACCATCAataataacagcagcagcaacaacaacaacaatcacagtAGCCAGAGCAGTGAGAACAACAACgagacgacaacaacaacaacaacagcgacagtgttcaagtcaacaacaacgacaacaacaacaactgatcTGACAACGACACATCCTCAtaatgacgatgatgacgacaacgatgacgatgataaTGTTCAGGATCATGTTCATGATCATGAGCTGCgagatgctgatgatgatgaggataTGGAAATTACAGGcaacgagcaacaacaacaacaacagcaacatcccGTTGCTAACAATCGTCATGAGGACGACAACGATGAGGAGGAGTCCGAGGAGCACGTTGTCGAACTGTCCAATGCCACAGCCACGGCGGAAAGCAATGAGCTGAGAATCAAAAAGGAGCAGATCAGTCCACTGGATCTGAACGTGCTCAGTCCACAGTCGGCCCTCGCCGCTGCCGCCGCGGCCGCCGCAGCTGCTGCCTGCGCCAACGATCCGAACAAGTTCCAGGCTCTGCTCCTGGAACGCACCAAGGCGTTGGCCGCCGAGGCGCTCAAAAATGGCGCCAGCGATGCGTCGAATGCAAATAGCGATGaacaacaacaacatgcaacAGAGGCAGCGACAGCTGAacatgtggcagcaacagatgatgtagaagaagaagaagatgatgaagaagcagcagcagccaagtCACAGCCTGACACAAGTAAAAATGACATGGGAAcgaatgaaaatgaaacatTGCCCGATGCCAGTTTGCAGCCAAAAGTCGAAATTATTGACACTgacgatgccgatgccgatgaTGGCAACCCTGGCAACCCTGTCACGCAGGGGGTTGAGGCGACAGGTCAAACTCTAGAAGAGCAGCTGGTCAATAGCTACTGGAGGCGTGGCTTTGAAACgagcacaacagcaacagcaacagcagcagcagcagttgttgttgcagcagcaactgggAGCAAAACGCcaacaatttatcaaaatgcCAATGtggtgcagcagcaactgttgctgccaccgccgccgccgccacagcagcagcagcagcaacagcactttgccacgcaacaacaacaacaacaacaacagcaacatcaacaacaacagcagcatcaacactatcagcaacaacaacaacagcaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCAACTCGCCTAGATGCCGCCACAcaccagcaacatcagcagcaccagcatccactccagcagcagcagcagcagcaacagcagcagcagcaattgttgcagcagcagcaacatcatcacaacagcagcaatagcagcaacagcagcagcagcgcagctGTCAGCGATCCACTGAACCACCATCATCATGCGCACCACCACGCCCACGGGCATGGTCAATTGCTGCACTCGGCGCACCATTTGCATCATGGCGGCGATTCCAATTCATCCAGCGCCAATAGCACACCGAACAGCACCGCTCAGCTGGCGGCGAGTATTGCCAACACGTTGAACGGCAACAAGTCGCTGTTGcaggcagcagctgctgccaatGTCGCTGCCGCCGCTGTCGCCGTTGCcgaggacaacaacaacagcctgACGCCAGCTGCCGCCGCGGCAATGGCGGCACATGCCCAGCATGCCGCCGCCTTGGGTGCCCCAAATTTCTTGCCCAACCTGCCCAGCTTGCCGGCATTTCAATTTGCCGCCGCCGCGGCCGCTGGACAGGATGCCCGAGCGCATTTCCGGTTTGCGGATGCCGAATTGCAATTGCAGCCGGGTGTCTCGATGGCCGGCCGATTGGGCGAGTCCCTCATACCCAAGGGCGATCCCATGGAGGCCAAACTGCAGGAGATGCTGCGTTACAACATGGACAAATATGCGAATCAAGCGCTGGACACTCTTCACATCTCGCGACGCGTCCGTGAATTGCTGTCGGTGCACAACATTGGCCAACGTCTGTTTGCCAAATACATTTTGGGCCTGTCCCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCGAAGCCCTGGGATAAGCTCACAGAGAAGGGTCGTGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGATGATAACGCCGTCATGCTGCTCAAATCGCTCATACCCAAGAAAGATTCTGGACTGCCACAATACGCTGGTCGCGGCGCTGGCGGCGATGATTCCATGTCTGAGGATCGCATTGCCCACATACTCAGCGAGGCCTCGTCGCTTATGAAAAGCAACGCGGCTGCCGTTCAGCAACAGCAGGAGCATCAGCGTCGTCACATTGGCGGCGACGATACGCACAGCAATGAGGACAGCAGATCGCCGCCTCAGAGCTGCACTTCACCATTCTACAAGGTCGATCAGCAGctgaagcaacagcagcagcagcaacagttgctcgTCTCGGAGCACGCGCAACGCGAGCAACGCGAAGCGGCTGCCGCCGCGGCCGCCGTTGCCgttcatcagcagcagcagcagcgcgaGCAGCGGGAGCAGCGCGAGGCGGCGCAGcgggagcagcagcagcgactgcGTCACGAGGATTTGGCGCAGGACAAGATGGCGCGGCTGTATCAGGAGCTGATGGCCCGCACACCACGCGAGGCATCCTTCCCAAGCTTTCTGCTGTCGCCGTTCTTTGGTGGAGCCGCCGGCATGCCCGCAGCAGCTGCCAATCCATTCCCCGCGGCAATGGCCGCCGATGAGAATATGCGTCATGCGTTCGAGCGGGAAATCGCcaagttgcagcagcagcatcagcagcaggcGCAGGCCGCCAGTTTTCCCAACTTTTCCAGTTTGATGGCACTGCAGCAGCAGGTGTTGAACGGTGCACAGGATCTGTCGCTGGCCGGCAAGGACATCAAGCTGAACGGGCAGCGATCGTCGCTGGATCAGCACagcggaagcagcagcagcaaggaCGGCGAACGTGGCGATGATGAGCGGGGCTTTGCAGCCTTGCCACATGCCCGCAAATCGGACGGTGGCAACACACCGGCACcgccagcaccaccagcaccgcCCGCACCACCGAACAGCGGCAATCCGAACGCGTCGACAACTGCGGCTGGTGTTGCCGTCAGCGGCAATCACGGCAGCAACTCAGCAGCGCCAAGTCCATTGAGCAACTCGATCCTGCCACCGGCGCTGAGCAGCCAGGGGGAGGAGTTTGCGGCAACGGCGAGTCCGCTGCAGCGCATGGCATCCATAACCAACTCGCTGATCACACAGCCACCGGTGACGCCGCACCACTCGCAGCCACAGCGACCCACCAAGGCGGTGCTGCCACCGATCACCCAGCAACAGTTCGACATGTTCAACAATCTCAACACCGAGGACATTGTGCGACGCGTCAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGCCTGTTCGGCGAGTCCGTGCTCGGACTGTCGCAGGGCTCCGTCTCGGATTTACTGGCCAGACCCAAGCCCTGGCACATGCTGACCCAGAAGGGACGCGAGCCGTTCATACGCATGAAGATGTTCCTCGAGGATGAAAATGCGGTGCACAAACTGGTAGCCAGCCAGTATAAGATCGCGCCCGAGAAACTGATGCGCACGGGCAGCTACAGTGGCAGCCCGCAGATGCCGCAGGGCCTGGCCAACAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGCGCAGGCGCAGCACATCATGCAGCAAATGCAGGCGGCCGCCGCTATGTCAGCGGccatgcagcagcagcagcaggccGCCGCCGCGCAAGCCGCTGCCGTGCAACAGGCCCAGGCACAGGCCGTGCAgagccagcagcagcagcagcaggcggCGCAGCAGCAGGCGGCAGCGCAGTTGCTGCACCATCAGAACATGCTGCTGACATCGCCGGGCTTGCCGCCGCAGCATGCGATCAGCTTGCCCGCGGCCAGCACGCCCAGCGGCCAGGCGAGTGGCAATCCAGTTCAGGCCGTGGGCACGCCCGTCAGTGGCGAAAAGAAGCCCATGATGATGCCGGTTCATGGTGGGGCACATGCCCCAAATGCGATGCGCAGCCTGCATCAGCACATGTCGCCAACTGTGTACGAGATGGCCGCGTTGACCCAGGACCTGGATACGCACGACATTACCACGAAGATCAAGGAGGCGCTCTTGGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTGGGACTCTCGCAGGGATCCGTCTCGGAGCTGCTCAGCAAACCGAAGCCCTGGCACATGCTGTCGATCAAGGGACGCGAGCCCTTCATCCGCATGCAATTGTGGCTCAGTGATGCCAACAACGTGGAGCGCCTGCAGCTGCTGAAGAACGAGCGGAGGGAGGCGAGCAAGCGGAGACGCAGCACAGGACCAAATCAACAggacaacagcagcgacaCGTCCAGCAACGATACGAACGATTTCTATACGAGCAGCCCGGGACCCGGCTCGGTGGGTTCGTCGGTGAGCGGCGCTCCGCCCAGCAAGAAGCAGCGCGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGCCTGGCCTTTGCCCTCGATCCGTATCCCAATGTCGGCACCATCGAGTTTCTGGCCAACGAGCTGAGCCTGGCCACCCGAACAATTACCAACTGGTTCCACAATCATCGCATGCGCTTGAAGCAACAGGTGCCGCATGGCCAGCCCGGCCAGGATAATCCGATACCCAGTCGCGAGAACACAAATGCCACACCCTTCGATCCCGTCCAGTTTCGCATTCTGCTGCAGCAGCGTCTCGTCGAGCTGCACAAGGAGCGCATGGGCTTGAGCGGTGCGCCCATCCCATACCCACCGTACTTTGCCGCCGCCGCGCTGCTCGGACGCAGCTTGGCCGGCATACCGGGAGCCGCAGCGGCAGCAGGTGCGGCGGCTGCCGCGGCCGCTGCTGTTGGCGCCGCCGGCGGGGATGAGTTGCAGGCCTTGAATCAGGCCTTCAAGGAGCAAATGAGCGGCTTGGATTTGTCCATGCCCACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGATGAGTTGGAGATGGATGCCAGCGGGCACAACATGAGCGACAACGAGTCCATCGAGGGTGGCCACGAGCCGGAGAATACGTCCGTCTCCGACTACGAGAAGGCGCTGCAAAAGTCGGCGCTCGCCtccgccgccgctgccgccgcGTACATGAGCAACGCGGCACGCAGCTCGCGCCGCAAGCCCGCGGCACCACAGTGGGTCAATCCCGCCGGCACTGGCACGCCCACAGCCGCagccgctgttgctgccgccgccgccgccgctgctgccgcgGCAGCTGCAGTCGCGGCCGGCGATAGCAGCGAGCGGATCATCAACGGCGTCTGCGTCATGCAGGCCTCCGACTACAGTCGCGACGAAAGCGACAGCGTCAAGGGCGCCAACGACATGGACAACGATGAGCATGCCCAGCTCGAGATTGATCAGCGTTTCATGGAGCCCGAGGTGCGCATCAAACAGGAGgaggacgatgacgacgagcagcagcagcagcagcagcagcaacaacaacagcagcagcagcagcagttgcagcagGAGGAGAGCGGACGCCTCGACAGCGATGCGACTGAGAAGCAACTCAAGGTGATCAACGAGGAGAAGTTGCGCATGGTGCGCGTGCGGCGTCTCAGCAGCAGCGGTGAGGCCGAGGAGCATTGCGCGGCAGCGCAGCAAGCGACGGTTGCAGCGACGCCAGCGGCAGCTGCGTGGAACTATTAA
Protein Sequence
MWHGARAPSRPGSHPGQQQSSRPPSTGQVLDVKIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNNSNSNITINNNSSSNNNNNHSSQSSENNNETTTTTTTATVFKSTTTTTTTTDLTTTHPHNDDDDDNDDDDNVQDHVHDHELRDADDDEDMEITGNEQQQQQQQHPVANNRHEDDNDEEESEEHVVELSNATATAESNELRIKKEQISPLDLNVLSPQSALAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDASNANSDEQQQHATEAATAEHVAATDDVEEEEDDEEAAAAKSQPDTSKNDMGTNENETLPDASLQPKVEIIDTDDADADDGNPGNPVTQGVEATGQTLEEQLVNSYWRRGFETSTTATATAAAAVVVAAATGSKTPTIYQNANVVQQQLLLPPPPPPQQQQQQQHFATQQQQQQQQQHQQQQQHQHYQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSTRLDAATHQQHQQHQHPLQQQQQQQQQQQQLLQQQQHHHNSSNSSNSSSSAAVSDPLNHHHHAHHHAHGHGQLLHSAHHLHHGGDSNSSSANSTPNSTAQLAASIANTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPAAAAAMAAHAQHAAALGAPNFLPNLPSLPAFQFAAAAAAGQDARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRIAHILSEASSLMKSNAAAVQQQQEHQRRHIGGDDTHSNEDSRSPPQSCTSPFYKVDQQLKQQQQQQQLLVSEHAQREQREAAAAAAAVAVHQQQQQREQREQREAAQREQQQRLRHEDLAQDKMARLYQELMARTPREASFPSFLLSPFFGGAAGMPAAAANPFPAAMAADENMRHAFEREIAKLQQQHQQQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLDQHSGSSSSKDGERGDDERGFAALPHARKSDGGNTPAPPAPPAPPAPPNSGNPNASTTAAGVAVSGNHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAVQSQQQQQQAAQQQAAAQLLHHQNMLLTSPGLPPQHAISLPAASTPSGQASGNPVQAVGTPVSGEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELEMDASGHNMSDNESIEGGHEPENTSVSDYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGTGTPTAAAAVAAAAAAAAAAAAAVAAGDSSERIINGVCVMQASDYSRDESDSVKGANDMDNDEHAQLEIDQRFMEPEVRIKQEEDDDDEQQQQQQQQQQQQQQQQLQQEESGRLDSDATEKQLKVINEEKLRMVRVRRLSSSGEAEEHCAAAQQATVAATPAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00495757;
90% Identity
iTF_00533696;
80% Identity
iTF_00533696;